FFCP PHASE1:Hg19::chr16:74808535..74808614,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79152 | |EntrezGene=79152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21197 | |HGNC=21197 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=106bp_to_uc010vmy.1_5end | |association_with_transcript=106bp_to_uc010vmy.1_5end | ||
|cluster_id=chr16:74808535..74808614,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_FA2H_5end | |description=CAGE_peak_3_at_FA2H_5end | ||
|id=chr16:74808535..74808614,- | |id=chr16:74808535..74808614,- | ||
|ontology_enrichment_celltype=CL:0000066!3.33e-08!254;CL:1000507!1.58e-07!12;CL:1000494!1.58e-07!12;CL:1000497!3.42e-07!18;CL:0002518!3.42e-07!18 | |ontology_enrichment_celltype=CL:0000066!3.33e-08!254;CL:1000507!1.58e-07!12;CL:1000494!1.58e-07!12;CL:1000497!3.42e-07!18;CL:0002518!3.42e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;5.51e-14;10!CL:1000494;5.51e-14;10!CL:1000449;7.46e-11;15!CL:1000497;2.58e-09;17!CL:0002518;2.58e-09;17!CL:0002681;3.97e-07;12!CL:0002584;3.97e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,6.81e-14,10;CL:1000494,6.81e-14,10;CL:1000449,8.97e-11,15;CL:1000497,3.02e-09,17;CL:0002518,3.02e-09,17;CL:0002681,4.81e-07,12;CL:0002584,4.81e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.75e-12;82!UBERON:0006241;1.28e-07;3!UBERON:0003057;1.28e-07;3 | |||
|ontology_enrichment_disease=DOID:305!3.56e-20!106;DOID:0050687!4.79e-14!143;DOID:299!6.55e-07!25 | |ontology_enrichment_disease=DOID:305!3.56e-20!106;DOID:0050687!4.79e-14!143;DOID:299!6.55e-07!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-39!115;UBERON:0001049!1.64e-31!57;UBERON:0005068!1.64e-31!57;UBERON:0006241!1.64e-31!57;UBERON:0007135!1.64e-31!57;UBERON:0002780!9.78e-26!41;UBERON:0001890!9.78e-26!41;UBERON:0006240!9.78e-26!41;UBERON:0005743!6.18e-25!86;UBERON:0003080!8.64e-25!42;UBERON:0002616!1.36e-24!59;UBERON:0003075!5.77e-24!86;UBERON:0007284!5.77e-24!86;UBERON:0001017!8.24e-24!82;UBERON:0000955!1.86e-22!69;UBERON:0006238!1.86e-22!69;UBERON:0001893!5.60e-22!34;UBERON:0002346!5.63e-22!90;UBERON:0002020!6.40e-22!34;UBERON:0003528!6.40e-22!34;UBERON:0000073!7.39e-22!94;UBERON:0001016!7.39e-22!94;UBERON:0002791!5.40e-21!33;UBERON:0001869!6.55e-20!32;UBERON:0003056!1.03e-17!61;UBERON:0000064!4.74e-17!219;UBERON:0002619!2.24e-16!22;UBERON:0000062!9.81e-16!511;UBERON:0001950!1.36e-14!20;UBERON:0000481!1.48e-14!347;UBERON:0000153!1.10e-13!129;UBERON:0007811!1.10e-13!129;UBERON:0000956!1.46e-13!25;UBERON:0000203!1.46e-13!25;UBERON:0000033!5.26e-13!123;UBERON:0000489!1.83e-11!32;UBERON:0000025!5.31e-11!194;UBERON:0004121!1.32e-10!169;UBERON:0002308!1.80e-10!9;UBERON:0000125!1.80e-10!9;UBERON:0004111!2.68e-10!241;UBERON:0000477!3.15e-10!286;UBERON:0002420!4.66e-10!9;UBERON:0007245!4.66e-10!9;UBERON:0010009!4.66e-10!9;UBERON:0010011!4.66e-10!9;UBERON:0000454!4.66e-10!9;UBERON:0000924!6.71e-10!173;UBERON:0006601!6.71e-10!173;UBERON:0000475!5.84e-09!365;UBERON:0004921!1.42e-08!129;UBERON:0004185!1.42e-08!129;UBERON:0000058!1.82e-08!26;UBERON:0009663!2.04e-08!7;UBERON:0002113!2.51e-08!27;UBERON:0003918!2.51e-08!27;UBERON:0005095!2.51e-08!27;UBERON:0007687!2.51e-08!27;UBERON:0000922!4.29e-08!612;UBERON:0005409!5.96e-08!35;UBERON:0000468!6.16e-08!659;UBERON:0003076!6.98e-08!15;UBERON:0003057!6.98e-08!15;UBERON:0005177!9.87e-08!107;UBERON:0001007!1.13e-07!155;UBERON:0001555!1.13e-07!155;UBERON:0007026!1.13e-07!155;UBERON:0000464!1.48e-07!104;UBERON:0009773!1.58e-07!12;UBERON:0001231!1.58e-07!12;UBERON:0004810!1.58e-07!12;UBERON:0002298!1.71e-07!8;UBERON:0002553!2.63e-07!70;UBERON:0000483!3.07e-07!309;UBERON:0000200!3.66e-07!6;UBERON:0000080!4.89e-07!18;UBERON:0002120!4.89e-07!18;UBERON:0004875!4.89e-07!18;UBERON:0005721!4.89e-07!18;UBERON:0005754!4.89e-07!18;UBERON:0007297!4.89e-07!18;UBERON:0004876!6.12e-07!20;UBERON:0000119!6.19e-07!312;UBERON:0000160!6.78e-07!27;UBERON:0000467!9.24e-07!625 | |ontology_enrichment_uberon=UBERON:0007023!1.11e-39!115;UBERON:0001049!1.64e-31!57;UBERON:0005068!1.64e-31!57;UBERON:0006241!1.64e-31!57;UBERON:0007135!1.64e-31!57;UBERON:0002780!9.78e-26!41;UBERON:0001890!9.78e-26!41;UBERON:0006240!9.78e-26!41;UBERON:0005743!6.18e-25!86;UBERON:0003080!8.64e-25!42;UBERON:0002616!1.36e-24!59;UBERON:0003075!5.77e-24!86;UBERON:0007284!5.77e-24!86;UBERON:0001017!8.24e-24!82;UBERON:0000955!1.86e-22!69;UBERON:0006238!1.86e-22!69;UBERON:0001893!5.60e-22!34;UBERON:0002346!5.63e-22!90;UBERON:0002020!6.40e-22!34;UBERON:0003528!6.40e-22!34;UBERON:0000073!7.39e-22!94;UBERON:0001016!7.39e-22!94;UBERON:0002791!5.40e-21!33;UBERON:0001869!6.55e-20!32;UBERON:0003056!1.03e-17!61;UBERON:0000064!4.74e-17!219;UBERON:0002619!2.24e-16!22;UBERON:0000062!9.81e-16!511;UBERON:0001950!1.36e-14!20;UBERON:0000481!1.48e-14!347;UBERON:0000153!1.10e-13!129;UBERON:0007811!1.10e-13!129;UBERON:0000956!1.46e-13!25;UBERON:0000203!1.46e-13!25;UBERON:0000033!5.26e-13!123;UBERON:0000489!1.83e-11!32;UBERON:0000025!5.31e-11!194;UBERON:0004121!1.32e-10!169;UBERON:0002308!1.80e-10!9;UBERON:0000125!1.80e-10!9;UBERON:0004111!2.68e-10!241;UBERON:0000477!3.15e-10!286;UBERON:0002420!4.66e-10!9;UBERON:0007245!4.66e-10!9;UBERON:0010009!4.66e-10!9;UBERON:0010011!4.66e-10!9;UBERON:0000454!4.66e-10!9;UBERON:0000924!6.71e-10!173;UBERON:0006601!6.71e-10!173;UBERON:0000475!5.84e-09!365;UBERON:0004921!1.42e-08!129;UBERON:0004185!1.42e-08!129;UBERON:0000058!1.82e-08!26;UBERON:0009663!2.04e-08!7;UBERON:0002113!2.51e-08!27;UBERON:0003918!2.51e-08!27;UBERON:0005095!2.51e-08!27;UBERON:0007687!2.51e-08!27;UBERON:0000922!4.29e-08!612;UBERON:0005409!5.96e-08!35;UBERON:0000468!6.16e-08!659;UBERON:0003076!6.98e-08!15;UBERON:0003057!6.98e-08!15;UBERON:0005177!9.87e-08!107;UBERON:0001007!1.13e-07!155;UBERON:0001555!1.13e-07!155;UBERON:0007026!1.13e-07!155;UBERON:0000464!1.48e-07!104;UBERON:0009773!1.58e-07!12;UBERON:0001231!1.58e-07!12;UBERON:0004810!1.58e-07!12;UBERON:0002298!1.71e-07!8;UBERON:0002553!2.63e-07!70;UBERON:0000483!3.07e-07!309;UBERON:0000200!3.66e-07!6;UBERON:0000080!4.89e-07!18;UBERON:0002120!4.89e-07!18;UBERON:0004875!4.89e-07!18;UBERON:0005721!4.89e-07!18;UBERON:0005754!4.89e-07!18;UBERON:0007297!4.89e-07!18;UBERON:0004876!6.12e-07!20;UBERON:0000119!6.19e-07!312;UBERON:0000160!6.78e-07!27;UBERON:0000467!9.24e-07!625 | ||
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| ||
|short_description=p3@FA2H | |short_description=p3@FA2H | ||
}} | }} |
Latest revision as of 20:56, 17 September 2015
Short description: | p3@FA2H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FA2H_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 106bp_to_uc010vmy.1_5end |
EntrezGene: | FA2H |
HGNC: | 21197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.81e-14 | 10 |
nephron tubule epithelial cell | 6.81e-14 | 10 |
epithelial cell of nephron | 8.97e-11 | 15 |
kidney cell | 3.02e-09 | 17 |
kidney epithelial cell | 3.02e-09 | 17 |
kidney cortical cell | 4.81e-07 | 12 |
renal cortical epithelial cell | 4.81e-07 | 12 |