FFCP PHASE1:Hg19::chr11:70963809..70963836,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22941 | |EntrezGene=22941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14295 | |HGNC=14295 | ||
|TSSclassifier=strong | |||
|UniProt=C9JFP8 | |UniProt=C9JFP8 | ||
|association_with_transcript=-186bp_to_ENST00000413503_5end | |association_with_transcript=-186bp_to_ENST00000413503_5end | ||
|cluster_id=chr11:70963809..70963836,- | |||
|coexpression_cluster_id=C3198 | |||
|description=CAGE_peak_2_at_SHANK2_5end | |description=CAGE_peak_2_at_SHANK2_5end | ||
|id=chr11:70963809..70963836,- | |id=chr11:70963809..70963836,- | ||
|ontology_enrichment_celltype=CL:0000223!1.84e-12!59;CL:0002076!5.10e-10!43;CL:0000066!3.25e-07!254 | |ontology_enrichment_celltype=CL:0000223!1.84e-12!59;CL:0002076!5.10e-10!43;CL:0000066!3.25e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.19e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,3.10e-11,58;CL:0002076,3.58e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.31e-09;30!UBERON:0009497;1.99e-08;13!CL:0000223;3.07e-07;58!UBERON:0004161;8.88e-07;11 | |||
|ontology_enrichment_disease=DOID:299!5.64e-07!25 | |ontology_enrichment_disease=DOID:299!5.64e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;6.76e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,5.58e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.26e-20!169;UBERON:0000925!2.26e-20!169;UBERON:0006595!2.26e-20!169;UBERON:0000481!3.21e-19!347;UBERON:0000475!6.16e-19!365;UBERON:0002100!2.85e-18!216;UBERON:0001007!1.14e-17!155;UBERON:0001555!1.14e-17!155;UBERON:0007026!1.14e-17!155;UBERON:0000466!3.87e-16!126;UBERON:0009569!2.05e-15!113;UBERON:0003104!5.21e-14!238;UBERON:0009142!5.21e-14!238;UBERON:0004921!5.70e-14!129;UBERON:0004185!5.70e-14!129;UBERON:0005177!2.44e-13!107;UBERON:0000077!2.80e-12!130;UBERON:0000464!6.71e-11!104;UBERON:0005911!1.22e-10!82;UBERON:0005256!6.56e-10!143;UBERON:0000468!1.28e-09!659;UBERON:0000915!2.50e-09!52;UBERON:0004111!2.55e-09!241;UBERON:0000477!1.13e-08!286;UBERON:0000062!1.15e-08!511;UBERON:0009497!6.66e-08!25;UBERON:0000015!6.66e-08!25;UBERON:0002423!6.66e-08!25;UBERON:0006235!6.66e-08!25;UBERON:0004161!6.66e-08!25;UBERON:0003929!6.81e-08!54;UBERON:0001041!8.84e-08!98;UBERON:0005172!2.17e-07!55;UBERON:0005173!2.17e-07!55;UBERON:0000922!2.34e-07!612;UBERON:0002417!4.38e-07!61;UBERON:0000916!4.38e-07!61;UBERON:0009854!5.89e-07!23;UBERON:0009856!6.78e-07!26;UBERON:0008835!7.78e-07!22;UBERON:0003894!7.78e-07!22;UBERON:0007023!8.95e-07!115;UBERON:0007499!9.10e-07!25 | |ontology_enrichment_uberon=UBERON:0004119!2.26e-20!169;UBERON:0000925!2.26e-20!169;UBERON:0006595!2.26e-20!169;UBERON:0000481!3.21e-19!347;UBERON:0000475!6.16e-19!365;UBERON:0002100!2.85e-18!216;UBERON:0001007!1.14e-17!155;UBERON:0001555!1.14e-17!155;UBERON:0007026!1.14e-17!155;UBERON:0000466!3.87e-16!126;UBERON:0009569!2.05e-15!113;UBERON:0003104!5.21e-14!238;UBERON:0009142!5.21e-14!238;UBERON:0004921!5.70e-14!129;UBERON:0004185!5.70e-14!129;UBERON:0005177!2.44e-13!107;UBERON:0000077!2.80e-12!130;UBERON:0000464!6.71e-11!104;UBERON:0005911!1.22e-10!82;UBERON:0005256!6.56e-10!143;UBERON:0000468!1.28e-09!659;UBERON:0000915!2.50e-09!52;UBERON:0004111!2.55e-09!241;UBERON:0000477!1.13e-08!286;UBERON:0000062!1.15e-08!511;UBERON:0009497!6.66e-08!25;UBERON:0000015!6.66e-08!25;UBERON:0002423!6.66e-08!25;UBERON:0006235!6.66e-08!25;UBERON:0004161!6.66e-08!25;UBERON:0003929!6.81e-08!54;UBERON:0001041!8.84e-08!98;UBERON:0005172!2.17e-07!55;UBERON:0005173!2.17e-07!55;UBERON:0000922!2.34e-07!612;UBERON:0002417!4.38e-07!61;UBERON:0000916!4.38e-07!61;UBERON:0009854!5.89e-07!23;UBERON:0009856!6.78e-07!26;UBERON:0008835!7.78e-07!22;UBERON:0003894!7.78e-07!22;UBERON:0007023!8.95e-07!115;UBERON:0007499!9.10e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.86e-12;25!UBERON:0004921;5.12e-09;33!UBERON:0002107;1.06e-08;19!UBERON:0006925;1.06e-08;19!UBERON:0005409;2.47e-08;22!UBERON:0002365;6.61e-08;31!UBERON:0002330;6.61e-08;31!UBERON:0005172;1.85e-07;52!UBERON:0005173;1.85e-07;52!UBERON:0000160;2.96e-07;17!UBERON:0001007;5.86e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.09e-21,160;UBERON:0000925,9.09e-21,160;UBERON:0006595,9.09e-21,160;UBERON:0001007,6.27e-19,145;UBERON:0001555,6.27e-19,145;UBERON:0007026,6.27e-19,145;UBERON:0004921,9.28e-17,118;UBERON:0009569,2.43e-14,112;UBERON:0005177,1.43e-13,101;UBERON:0005911,8.48e-13,82;UBERON:0009497,3.30e-12,25;UBERON:0000015,3.30e-12,25;UBERON:0002423,3.30e-12,25;UBERON:0006235,3.30e-12,25;UBERON:0004161,3.30e-12,25;UBERON:0008835,1.30e-11,22;UBERON:0003894,1.30e-11,22;UBERON:0005172,3.74e-11,54;UBERON:0005173,3.74e-11,54;UBERON:0001041,4.56e-11,87;UBERON:0009854,6.99e-11,23;UBERON:0007499,8.40e-11,25;UBERON:0003929,1.12e-10,54;UBERON:0011216,1.46e-10,223;UBERON:0009856,3.51e-10,26;UBERON:0002417,3.57e-09,60;UBERON:0000916,3.57e-09,60;UBERON:0002100,5.45e-09,199;UBERON:0002107,7.17e-09,19;UBERON:0006925,7.17e-09,19;UBERON:0008836,7.17e-09,19;UBERON:0002365,3.51e-08,31;UBERON:0002330,3.51e-08,31;UBERON:0000160,1.19e-07,17;UBERON:0005409,2.87e-07,25;UBERON:0004111,7.97e-07,240;UBERON:0002530,8.93e-07,59 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.140954404095971,0,0.446961094427288,0,0,0,0,1.47440361900905,5.58240934377942,0.218441372130172,0.791300934685361,2.10402800032079,4.63956326019082,0.672325146451775,0,0,0,0.492484232307152,2.85600967741954,0.313454721478088,0,0,0.125542639594803,0.152826811495903,0.0821005894499457,0,0,0,0,0.919421224478927,3.0120591877825,0.739508020333575,0.387336002901508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.0843174571537,3.50936537445123,0.289693037921647,0,0,0,0,0.087834785693126,4.1913304159268,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,1.49091585508596,0.25326102332916,0,0.860509862246441,0.354668382198357,0,0,0,0,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0.936480230490962,0,0.448346041655403,0,0.161872944368132,0.140450806702248,1.83738754129404,1.47401180774122,1.54988671763648,0,1.23633464639278,0,2.15585442544872,0,0.375355559615893,0.554128230968366,2.19488810440419,1.5324389789951,0.300476117813194,0,0,0,0.211931901159562,0.300091096084402,0.206105058476878,2.06112432036503,0.558350568994769,0.168776332241266,0,0,0,0.323292113637624,0.355009592516614,0,0.169560592310488,0.966304265816484,0.272746120590835,1.43402297694502,1.58565817968474,1.45782745153634,1.39432731443422,0.932949495138334,1.00928340350251,2.18986415445498,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,20.2808055714929,11.7939266001315,13.5881678536723,0,18.2022889043808,0.343135620597051,0.439001141634502,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,5.53143078571493,6.00940313466411,0,0,0,0.93733833986777,0.671928512795438,0.425325291727159,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0.448524337381443,0,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0.257207374262142,1.41849132023278,0.532844358032199,1.85871391755592,0,0.823240336780769,0,1.77695974371273,0,0.602878754119172,0.871533458600294,0.799783929456456,0,0,0,0,0,0,0.868687840005475,2.05476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0.542530047399471,1.03985430765404,3.92543775353756,1.73472656537328,3.27995961979597,0.300946099727719,0,0,0,0,0,0.391602314925481,0,0,0,0,0.303127571446259,1.66435439510497,0,0.496215615637554,0.460385919864187,0.841980283299221,0.512556597022804,0,0.965123526861645,1.48418066444991,0,0,0.657017248110473,0.519254429183621,0.464841513839837,21.5129820273088,1.40354529212299,0.644566922551274,0.34444334449382,0,0.262248829918848,0.902399225814824,0.616122696835318,3.13739907670742,2.92278449306521,0.633309773357254,0,0,0,0,2.70946437543853,3.01013864312912,1.01950509218015,1.66215201785745,1.11937377361089,0,0,0.512900250232778,0.984043937099117,0.976135183992909,6.28550171051106,0,0,0.574265537996172,0,3.21367859688319,0.290012154876366,0,0,0.137836572484531,0.429680979473094,0.145016693914229,0.0852266274161009,0.356128142586949,0.826424576804891,3.65161127993702,3.70076866234294,1.0115778085555,0.464845549297286,0.94443704049192,0.6970372701606,0,1.06461206063404,0.869932992075073,0.18532421910392,0.572499546967965,0.372158369359667,0,0.38126038784765,2.04718233049067,0,0,0,1.79872457583315,0.54907405947211,0.471249609382746,0.808729926293264,1.58510321173008,0,0.975267478179181,0.731140468893853,4.22600587027022,0.272999822815972,0,0,0.551365343546124,1.99031692572366,0.438450885253763,0.578775534266688,0,0,0.30982349809975,0,0.286822704408103,0.0982490410131212,0.35667105148125,1.06428319221179,0.844430541190656,0.658589785919804,0.75894634753143,0.349934720244983,0.865999014529609,1.34060455107157,2.17781969722645,6.7783536559281,1.72202149068492,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,1.67121139316383,1.78178808499583,1.22864280839693,0,0.281338832821026,0,0,0.211125408127993,2.59022384726391,0.552567831062295,0,0,0,0.933118762985422,1.97710372524119,6.62378346299754,0,0.690503839458535,0,2.22273980289274,1.93866549219044,0.185536196323703,0,3.9064164162785,14.3434399993761,0.724999575434793,1.0241410345695,0.762760950878299,0,0,0,0,4.42870692906919,0.844175070377856,0,0.221158519862449,0,1.53569778007781,0,0.41827123283581,0.923403102045565,0,0.23056390438806,1.97466817701499,1.4124158349861,2.23300811812344,0.641183153813036,0.533034776018635,0,0,0,0,0,0,0,0,1.68798451622422,5.87638109372932,9.04659657177221,0,1.99052386215701,2.91909962861019,1.83309043480088,0,0,0,3.03305098413047,0,0.937057782901357,0,0.782658475728359,0.485560759068186,3.15667522279512,1.20990716048664,0.30607276163049,0.126373159256976,0.450970258243478,0,1.32930774541437,0,0.313932918407225,0,1.13843818411917,0,0.520679215005393,0.48996198707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| ||
|short_description=p2@SHANK2 | |short_description=p2@SHANK2 | ||
}} | }} |
Latest revision as of 23:35, 19 September 2015
Short description: | p2@SHANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHANK2_5end |
Coexpression cluster: | C3198_salivary_breast_submaxillary_Intestinal_Hepatocyte_Prostate_thyroid |
Association with transcript: | -186bp_to_ENST00000413503_5end |
EntrezGene: | SHANK2 |
HGNC: | 14295 |
UniProt: | C9JFP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 3.10e-11 | 58 |
endo-epithelial cell | 3.58e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 5.58e-08 | 25 |