FFCP PHASE1:Hg19::chr3:174577105..174577136,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=254827 | |EntrezGene=254827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23219 | |HGNC=23219 | ||
|TSSclassifier=strong | |||
|UniProt=Q58DX5 | |UniProt=Q58DX5 | ||
|association_with_transcript=0bp_to_ENST00000485853,NM_207015,uc003fit.2_5end | |association_with_transcript=0bp_to_ENST00000485853,NM_207015,uc003fit.2_5end | ||
|cluster_id=chr3:174577105..174577136,+ | |||
|description=CAGE_peak_2_at_NAALADL2_5end | |description=CAGE_peak_2_at_NAALADL2_5end | ||
|id=chr3:174577105..174577136,+ | |id=chr3:174577105..174577136,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;1.34e-11;86!UBERON:0001041;5.25e-07;30 | |||
|ontology_enrichment_disease=DOID:305!3.01e-12!106;DOID:299!4.73e-11!25;DOID:0050687!5.31e-08!143 | |ontology_enrichment_disease=DOID:305!3.01e-12!106;DOID:299!4.73e-11!25;DOID:0050687!5.31e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:299;8.38e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.37e-11,106;DOID:299,9.24e-11,25;DOID:0050687,6.40e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.75e-20!129;UBERON:0004185!1.75e-20!129;UBERON:0004119!4.42e-20!169;UBERON:0000925!4.42e-20!169;UBERON:0006595!4.42e-20!169;UBERON:0001007!9.33e-20!155;UBERON:0001555!9.33e-20!155;UBERON:0007026!9.33e-20!155;UBERON:0000077!3.50e-17!130;UBERON:0000466!1.12e-12!126;UBERON:0000464!2.33e-11!104;UBERON:0001041!6.96e-11!98;UBERON:0007023!1.15e-10!115;UBERON:0005409!5.83e-10!35;UBERON:0005911!1.96e-09!82;UBERON:0000160!3.33e-08!27;UBERON:0002294!4.59e-08!7;UBERON:0001173!4.59e-08!7;UBERON:0004912!4.59e-08!7;UBERON:0005177!9.54e-08!107;UBERON:0002553!2.70e-07!70;UBERON:0001004!5.32e-07!72;UBERON:0003104!6.43e-07!238;UBERON:0009142!6.43e-07!238;UBERON:0005156!8.24e-07!59;UBERON:0000990!8.24e-07!59;UBERON:0009569!8.35e-07!113;UBERON:0004175!9.87e-07!25 | |ontology_enrichment_uberon=UBERON:0004921!1.75e-20!129;UBERON:0004185!1.75e-20!129;UBERON:0004119!4.42e-20!169;UBERON:0000925!4.42e-20!169;UBERON:0006595!4.42e-20!169;UBERON:0001007!9.33e-20!155;UBERON:0001555!9.33e-20!155;UBERON:0007026!9.33e-20!155;UBERON:0000077!3.50e-17!130;UBERON:0000466!1.12e-12!126;UBERON:0000464!2.33e-11!104;UBERON:0001041!6.96e-11!98;UBERON:0007023!1.15e-10!115;UBERON:0005409!5.83e-10!35;UBERON:0005911!1.96e-09!82;UBERON:0000160!3.33e-08!27;UBERON:0002294!4.59e-08!7;UBERON:0001173!4.59e-08!7;UBERON:0004912!4.59e-08!7;UBERON:0005177!9.54e-08!107;UBERON:0002553!2.70e-07!70;UBERON:0001004!5.32e-07!72;UBERON:0003104!6.43e-07!238;UBERON:0009142!6.43e-07!238;UBERON:0005156!8.24e-07!59;UBERON:0000990!8.24e-07!59;UBERON:0009569!8.35e-07!113;UBERON:0004175!9.87e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.49e-18;33!UBERON:0005409;8.19e-14;22!UBERON:0000160;9.73e-11;17!UBERON:0001041;2.30e-09;14!UBERON:0006947;1.37e-08;3!UBERON:0004054;1.37e-08;3!UBERON:0000058;2.48e-08;10!UBERON:0002294;4.78e-08;7!UBERON:0001173;4.78e-08;7!UBERON:0002110;1.35e-07;3!UBERON:0002108;1.50e-07;4!UBERON:0001555;2.50e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,2.02e-24,118;UBERON:0001007,2.18e-22,145;UBERON:0001555,2.18e-22,145;UBERON:0007026,2.18e-22,145;UBERON:0004119,2.53e-21,160;UBERON:0000925,2.53e-21,160;UBERON:0006595,2.53e-21,160;UBERON:0001041,1.56e-12,87;UBERON:0005409,7.96e-12,25;UBERON:0005177,6.87e-11,101;UBERON:0000160,9.91e-11,17;UBERON:0007023,9.98e-11,114;UBERON:0005911,4.14e-09,82;UBERON:0006947,1.41e-08,3;UBERON:0004054,1.41e-08,3;UBERON:0011216,4.90e-08,223;UBERON:0002553,1.18e-07,61;UBERON:0002110,1.25e-07,3;UBERON:0006242,1.25e-07,3;UBERON:0009569,1.38e-07,112;UBERON:0002108,1.73e-07,4;UBERON:0000161,2.18e-07,36;UBERON:0004175,3.77e-07,25;UBERON:0002100,7.77e-07,199 | |||
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| ||
|short_description=p2@NAALADL2 | |short_description=p2@NAALADL2 | ||
}} | }} |
Latest revision as of 19:16, 16 September 2015
Short description: | p2@NAALADL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAALADL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000485853, NM_207015, uc003fit.2_5end |
EntrezGene: | NAALADL2 |
HGNC: | 23219 |
UniProt: | Q58DX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 2.02e-24 | 118 |
digestive system | 2.18e-22 | 145 |
digestive tract | 2.18e-22 | 145 |
primitive gut | 2.18e-22 | 145 |
endoderm-derived structure | 2.53e-21 | 160 |
endoderm | 2.53e-21 | 160 |
presumptive endoderm | 2.53e-21 | 160 |
foregut | 1.56e-12 | 87 |
gastrointestinal system | 7.96e-12 | 25 |
trunk region element | 6.87e-11 | 101 |
intestine | 9.91e-11 | 17 |
adult organism | 9.98e-11 | 114 |
endo-epithelium | 4.14e-09 | 82 |
male genital duct | 1.41e-08 | 3 |
internal male genitalia | 1.41e-08 | 3 |
organ system subdivision | 4.90e-08 | 223 |
anatomical cavity | 1.18e-07 | 61 |
gallbladder | 1.25e-07 | 3 |
gall bladder primordium | 1.25e-07 | 3 |
subdivision of trunk | 1.38e-07 | 112 |
small intestine | 1.73e-07 | 4 |
orifice | 2.18e-07 | 36 |
internal genitalia | 3.77e-07 | 25 |
trunk | 7.77e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.37e-11 | 106 |
adenocarcinoma | 9.24e-11 | 25 |
cell type cancer | 6.40e-07 | 143 |