FFCP PHASE1:Hg19::chr17:39673387..39673422,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:39673387..39673422,-
|short_description=p@chr17:39673387..39673422,-
|description=CAGE_peak_at_chr17:39673387..39673422,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:39673387..39673422,- | |||
|coexpression_cluster_id=C1777 | |||
|description=CAGE_peak_at_chr17:39673387..39673422,- | |||
|id=chr17:39673387..39673422,- | |||
|ontology_enrichment_celltype=CL:0002251!4.91e-12!21;CL:0002327!8.47e-11!4;CL:0000575!3.63e-10!2;CL:0002076!5.67e-10!43;CL:0002231!7.58e-07!3;CL:0002621!9.02e-07!3;CL:0002623!9.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000575;1.96e-12;2!CL:0002231;1.30e-08;3!CL:0002327;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.85e-12,2;CL:0002231,1.40e-08,3;CL:0002327,8.14e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.87e-23;1 | |||
|ontology_enrichment_disease=DOID:1749!7.55e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.34e-23;1!DOID:3149;1.34e-23;1!DOID:3451;1.65e-12;2!DOID:4159;1.65e-12;2!DOID:0060122;1.65e-12;2!DOID:1749;2.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.34e-23,1;DOID:3149,1.34e-23,1;DOID:3451,1.65e-12,2;DOID:4159,1.65e-12,2;DOID:0060122,1.65e-12,2;DOID:1749,2.68e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000166!3.13e-19!21;UBERON:0000161!2.04e-18!35;UBERON:0000165!8.02e-17!28;UBERON:0000930!8.02e-17!28;UBERON:0001444!9.88e-13!48;UBERON:0001911!8.47e-11!4;UBERON:0005333!8.47e-11!4;UBERON:0008425!8.47e-11!4;UBERON:0005311!8.47e-11!4;UBERON:0003102!8.64e-11!95;UBERON:0001004!4.57e-10!72;UBERON:0004119!6.77e-09!169;UBERON:0000925!6.77e-09!169;UBERON:0006595!6.77e-09!169;UBERON:0003729!1.25e-08!5;UBERON:0000078!3.10e-08!18;UBERON:0001007!3.60e-08!155;UBERON:0001555!3.60e-08!155;UBERON:0007026!3.60e-08!155;UBERON:0000974!3.01e-07!10;UBERON:0001044!3.97e-07!6;UBERON:0003293!3.97e-07!6;UBERON:0003294!3.97e-07!6;UBERON:0010047!3.97e-07!6;UBERON:0000167!3.97e-07!6;UBERON:0001723!4.34e-07!3;UBERON:0001033!4.34e-07!3;UBERON:0010056!4.34e-07!3;UBERON:0001042!5.00e-07!10;UBERON:0009145!5.00e-07!10;UBERON:0003408!5.34e-07!10;UBERON:0001949!9.02e-07!3;UBERON:0005157!9.35e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;4.10e-23;1!UBERON:0005056;4.10e-23;1!UBERON:0004176;4.10e-23;1!UBERON:0001043;1.00e-08;3!UBERON:0001723;1.30e-08;3!UBERON:0001033;1.30e-08;3!UBERON:0003343;6.50e-07;4!UBERON:0004785;6.50e-07;4!UBERON:0000014;6.87e-07;4!UBERON:0000964;7.48e-07;4!UBERON:0010409;7.48e-07;4!UBERON:0001911;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,3.28e-23,1;UBERON:0005056,3.28e-23,1;UBERON:0001043,1.04e-08,3;UBERON:0009143,1.04e-08,3;UBERON:0001723,1.51e-08,3;UBERON:0001033,1.51e-08,3;UBERON:0010056,1.51e-08,3;UBERON:0003343,6.50e-07,4;UBERON:0004785,6.50e-07,4;UBERON:0000014,6.87e-07,4;UBERON:0000964,7.27e-07,4;UBERON:0010409,7.27e-07,4;UBERON:0004348,7.27e-07,4;UBERON:0005427,7.27e-07,4;UBERON:0001911,8.14e-07,4;UBERON:0005333,8.14e-07,4;UBERON:0008425,8.14e-07,4;UBERON:0005311,8.14e-07,4 | |||
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| ||
|short_description=p@chr17:39673387..39673422,- | |||
}} | }} |
Latest revision as of 16:42, 25 July 2015
Short description: | p@chr17:39673387..39673422, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39673387..39673422, - |
Coexpression cluster: | C1777_keratoacanthoma_esophagus_oral_Mammary_cervical_epidermoid_Corneal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.85e-12 | 2 |
epithelial cell of prostate | 1.40e-08 | 3 |
mammary gland epithelial cell | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 3.28e-23 | 1 |
external female genitalia | 3.28e-23 | 1 |
esophagus | 1.04e-08 | 3 |
esophageal region | 1.04e-08 | 3 |
tongue | 1.51e-08 | 3 |
gustatory system | 1.51e-08 | 3 |
future tongue | 1.51e-08 | 3 |
mucosa of oral region | 6.50e-07 | 4 |
respiratory system mucosa | 6.50e-07 | 4 |
zone of skin | 6.87e-07 | 4 |
cornea | 7.27e-07 | 4 |
eye surface | 7.27e-07 | 4 |
optic eminence | 7.27e-07 | 4 |
corneal primordium | 7.27e-07 | 4 |
mammary gland | 8.14e-07 | 4 |
mammary bud | 8.14e-07 | 4 |
mammary ridge | 8.14e-07 | 4 |
mammary placode | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.34e-23 | 1 |
keratoacanthoma | 1.34e-23 | 1 |
skin carcinoma | 1.65e-12 | 2 |
skin cancer | 1.65e-12 | 2 |
integumentary system cancer | 1.65e-12 | 2 |
squamous cell carcinoma | 2.68e-07 | 14 |