FFCP PHASE1:Hg19::chr1:43396337..43396354,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6513 | |EntrezGene=6513 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11005 | |HGNC=11005 | ||
|TSSclassifier=strong | |||
|UniProt=P11166 | |UniProt=P11166 | ||
|association_with_transcript=10bp_to_AF070544_5end | |association_with_transcript=10bp_to_AF070544_5end | ||
|cluster_id=chr1:43396337..43396354,- | |||
|description=CAGE_peak_3_at_SLC2A1_5end | |description=CAGE_peak_3_at_SLC2A1_5end | ||
|id=chr1:43396337..43396354,- | |id=chr1:43396337..43396354,- | ||
|ontology_enrichment_celltype=CL:0000066!4.35e-14!254;CL:0002076!2.78e-13!43;CL:0000223!1.51e-10!59;CL:0002368!1.11e-07!13;CL:0002202!7.42e-07!9;CL:0002632!7.42e-07!9 | |ontology_enrichment_celltype=CL:0000066!4.35e-14!254;CL:0002076!2.78e-13!43;CL:0000223!1.51e-10!59;CL:0002368!1.11e-07!13;CL:0002202!7.42e-07!9;CL:0002632!7.42e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002231;8.56e-12;3!CL:0002586;2.73e-11;3!CL:0000147;1.36e-08;14!CL:0000149;1.43e-08;4!CL:0000349;2.47e-08;19!CL:0000764;8.00e-08;2!CL:0000575;8.00e-08;2!CL:0000558;8.00e-08;2!CL:0002537;1.84e-07;5!CL:0002322;5.38e-07;5!CL:0002368;7.81e-07;13!CL:0002202;8.60e-07;9!CL:0002632;8.60e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.11e-12,253;CL:0002586,1.65e-11,3;CL:0002231,1.71e-11,3;CL:0000149,9.85e-09,4;CL:0000147,1.08e-08,14;CL:0000349,1.25e-08,19;CL:0000764,2.58e-08,2;CL:0000765,2.58e-08,2;CL:0000050,2.58e-08,2;CL:0000038,2.58e-08,2;CL:0000558,2.58e-08,2;CL:0000547,2.58e-08,2;CL:0000549,2.58e-08,2;CL:0000550,2.58e-08,2;CL:0000552,2.58e-08,2;CL:0002076,3.88e-08,42;CL:0000575,1.50e-07,2;CL:0002537,1.75e-07,5;CL:0000223,1.94e-07,58;CL:0002322,5.14e-07,5;CL:0002368,7.06e-07,13;CL:0002202,7.72e-07,9;CL:0002632,7.72e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.29e-07!106 | |ontology_enrichment_disease=DOID:305!5.29e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!2.90e-07!57;UBERON:0000064!8.35e-07!219 | |ontology_enrichment_uberon=UBERON:0004923!2.90e-07!57;UBERON:0000064!8.35e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0001781;2.73e-11;3!UBERON:0001782;2.73e-11;3!UBERON:0005631;5.65e-09;10!UBERON:0000158;5.65e-09;10!UBERON:0000966;6.22e-07;5!UBERON:0005388;6.22e-07;5!UBERON:0001802;6.22e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.26e-12,14;UBERON:0000158,4.26e-12,14;UBERON:0001782,1.65e-11,3;UBERON:0005424,1.65e-11,3;UBERON:0001781,9.85e-09,4;UBERON:0003124,1.81e-08,7;UBERON:0006554,2.49e-08,47;UBERON:0001008,4.18e-08,48;UBERON:0004871,1.05e-07,8 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0.737201809504527,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,1.02000345622126,0,0,0.136874425072884,0.251085279189606,0.152826811495903,0.164201178899891,0.236132343941038,0,0,0.154816123316076,0.919421224478927,1.50602959389125,2.58827807116751,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0.755751887377619,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0.567208902984407,0,0.087834785693126,0,1.09288586487763,1.48313777113772,0.324547393654683,0,0,0.476981248610684,0,0.371457501329565,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.264818361626438,0.573673241497627,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0.149448680551801,0,0.323745888736263,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0.300091096084402,0,0.772921620136887,0,0.168776332241266,0.389748020644795,0.252433774244115,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0.272746120590835,0.286804595389004,0.853815942907168,0.132529768321485,3.48581828608555,1.45125477021519,1.51392510525377,0,0,0,1.38134921352481,0,0,0.354920400119532,0.505754070234305,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.614942192715568,0.686271241194102,4.82901255797952,0,1.60846355858609,0.925884451585296,0,0,0,0.231860809950154,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0.148631162288728,0,0.16798212819886,0.567100388969546,0.179117045405697,0,1.53353071666084,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0.43596006883328,0.51336800074665,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.112085143993527,0,0.431255149719035,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0.157702415033935,0,1.20378439891088,0,0,0,0.368738337083406,0.173767228936166,0.195801157462741,0,0,0,0.213455115606889,0.606255142892519,1.66435439510497,1.81434175997808,0,0,0.841980283299221,0.256278298511402,0,0.321707842287215,0,0,0,0.0821271560138091,1.55776328755086,0.116210378459959,2.1754700926492,3.20810352485256,1.10497186723076,0,0.182091168006717,0.131124414959424,0.902399225814824,1.15523005656622,0.784349769176855,1.46139224653261,0.422206515571503,0,0.170093705276516,0,0,0,0,0,0,0.447749509444357,1.75407901316748,1.8300481571743,2.3080511260475,1.31205858279882,1.95227036798582,1.23649213977267,0.0915694648183434,0,0.574265537996172,1.30012049207304,1.6068392984416,0,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0,1.4875642382488,0.192190067365106,0.127612712494584,0.50578890427775,0,0.62962469366128,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0.54907405947211,0,0.606547444719948,0,0,0,0,2.11300293513511,0,0.141405431953713,0,0,0.66343897524122,0,0.578775534266688,0,0.608731130888112,0.92947049429925,0.845086807596724,0,0.0982490410131212,0.7133421029625,0,0,0.329294892959902,0,0,0.865999014529609,2.68120910214315,4.3556393944529,1.12972560932135,0.43050537267123,3.36942951335251,5.76459199597678,0.689170200620878,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,0,0.245040215981032,0,0,0.0711418433484141,0,0,0.191505370132367,0.635020748171649,0,0.561594356226918,0,0,0,0,0.321176150207399,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0.284136146806413,2.62618933211459,3.26661148915902,2.45728561679386,0,0.422008249231538,0.111308705022906,0.329607748453519,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0.123084805461069,0.933118762985422,0,0.179021174675609,0.511572370226872,0.394573622547734,0,0,0.969332746095218,0.74214478529481,0,0.260427761085233,0.0874599999961957,0,1.70690172428249,0.508507300585533,0.236387681767936,0,0,0,0.885741385813839,0.120596438625408,0,0.331737779793674,0.591095237907095,0,0,0.139423744278603,0,0.341826167541004,0.46112780877612,0.807818799687949,0.108647371922008,1.91400695839152,0.183195186803725,1.5991043280559,0,0.470940769185074,0,0.225595660617181,0,0.503464760927528,0,0.635746315921515,0.843992258112108,0.326465616318295,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0.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| ||
|short_description=p3@SLC2A1 | |short_description=p3@SLC2A1 | ||
}} | }} |
Latest revision as of 03:50, 18 September 2015
Short description: | p3@SLC2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC2A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_AF070544_5end |
EntrezGene: | SLC2A1 |
HGNC: | 11005 |
UniProt: | P11166 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.11e-12 | 253 |
retinal pigment epithelial cell | 1.65e-11 | 3 |
epithelial cell of prostate | 1.71e-11 | 3 |
visual pigment cell | 9.85e-09 | 4 |
pigment cell | 1.08e-08 | 14 |
extraembryonic cell | 1.25e-08 | 19 |
erythroid lineage cell | 2.58e-08 | 2 |
erythroblast | 2.58e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 2.58e-08 | 2 |
erythroid progenitor cell | 2.58e-08 | 2 |
reticulocyte | 2.58e-08 | 2 |
proerythroblast | 2.58e-08 | 2 |
basophilic erythroblast | 2.58e-08 | 2 |
polychromatophilic erythroblast | 2.58e-08 | 2 |
orthochromatic erythroblast | 2.58e-08 | 2 |
endo-epithelial cell | 3.88e-08 | 42 |
corneal epithelial cell | 1.50e-07 | 2 |
amnion mesenchymal stem cell | 1.75e-07 | 5 |
endodermal cell | 1.94e-07 | 58 |
embryonic stem cell | 5.14e-07 | 5 |
respiratory epithelial cell | 7.06e-07 | 13 |
epithelial cell of tracheobronchial tree | 7.72e-07 | 9 |
epithelial cell of lower respiratory tract | 7.72e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.26e-12 | 14 |
membranous layer | 4.26e-12 | 14 |
pigmented layer of retina | 1.65e-11 | 3 |
presumptive retinal pigmented epithelium | 1.65e-11 | 3 |
layer of retina | 9.85e-09 | 4 |
chorion | 1.81e-08 | 7 |
urinary system structure | 2.49e-08 | 47 |
renal system | 4.18e-08 | 48 |
somatic layer of lateral plate mesoderm | 1.05e-07 | 8 |