FFCP PHASE1:Hg19::chr18:47721315..47721430,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4645 | |EntrezGene=4645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7603 | |HGNC=7603 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULV0,Q7Z7A5,Q9H6Y6 | |UniProt=Q9ULV0,Q7Z7A5,Q9H6Y6 | ||
|association_with_transcript=20bp_to_ENST00000285039,NM_001080467,uc002leb.2_5end | |association_with_transcript=20bp_to_ENST00000285039,NM_001080467,uc002leb.2_5end | ||
|cluster_id=chr18:47721315..47721430,- | |||
|description=CAGE_peak_1_at_MYO5B_5end | |description=CAGE_peak_1_at_MYO5B_5end | ||
|id=chr18:47721315..47721430,- | |id=chr18:47721315..47721430,- | ||
|ontology_enrichment_celltype=CL:0000066!2.29e-24!254;CL:0000223!2.02e-15!59;CL:0002076!9.20e-14!43;CL:0002368!3.90e-07!13 | |ontology_enrichment_celltype=CL:0000066!2.29e-24!254;CL:0000223!2.02e-15!59;CL:0002076!9.20e-14!43;CL:0002368!3.90e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.10e-13;42!CL:0002251;8.83e-09;20!CL:0002368;1.17e-08;13!CL:0000082;9.63e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.34e-27,253;CL:0000223,1.07e-19,58;CL:0002076,2.01e-17,42;CL:0002251,9.35e-09,20;CL:0002368,1.10e-08,13;CL:0000082,9.78e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.80e-13;29!UBERON:0006595;1.60e-11;86!UBERON:0001041;1.69e-11;30!CL:0000223;2.98e-11;58 | |||
|ontology_enrichment_disease=DOID:305!6.52e-20!106;DOID:0050687!4.04e-12!143;DOID:299!1.61e-08!25 | |ontology_enrichment_disease=DOID:305!6.52e-20!106;DOID:0050687!4.04e-12!143;DOID:299!1.61e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:299;7.35e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.28e-21,106;DOID:0050687,2.45e-13,143;DOID:299,6.57e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.87e-27!169;UBERON:0000925!4.87e-27!169;UBERON:0006595!4.87e-27!169;UBERON:0004921!1.63e-23!129;UBERON:0004185!1.63e-23!129;UBERON:0001007!3.99e-23!155;UBERON:0001555!3.99e-23!155;UBERON:0007026!3.99e-23!155;UBERON:0000077!5.88e-21!130;UBERON:0000062!4.08e-17!511;UBERON:0001041!4.61e-16!98;UBERON:0001004!2.39e-15!72;UBERON:0000466!1.78e-14!126;UBERON:0000064!2.61e-14!219;UBERON:0005911!6.88e-14!82;UBERON:0000065!5.59e-13!53;UBERON:0000464!5.11e-12!104;UBERON:0008947!1.11e-11!38;UBERON:0003258!1.11e-11!38;UBERON:0007023!1.15e-11!115;UBERON:0000481!2.32e-11!347;UBERON:0005177!7.70e-11!107;UBERON:0005153!7.05e-10!37;UBERON:0000072!1.18e-09!46;UBERON:0002530!2.52e-09!59;UBERON:0000922!3.13e-09!612;UBERON:0005157!7.62e-09!51;UBERON:0001048!8.67e-09!168;UBERON:0009569!1.81e-08!113;UBERON:0000468!3.58e-08!659;UBERON:0000480!4.12e-08!626;UBERON:0005181!4.73e-08!35;UBERON:0000467!6.16e-08!625;UBERON:0005178!7.79e-08!34;UBERON:0002224!7.79e-08!34;UBERON:0002050!9.79e-08!605;UBERON:0005423!9.79e-08!605;UBERON:0002048!1.41e-07!22;UBERON:0000117!1.41e-07!22;UBERON:0000171!1.41e-07!22;UBERON:0000170!1.41e-07!22;UBERON:0005597!1.41e-07!22;UBERON:0000118!1.41e-07!22;UBERON:0000923!1.78e-07!604;UBERON:0005291!1.78e-07!604;UBERON:0006598!1.78e-07!604;UBERON:0002532!1.78e-07!604;UBERON:0000063!1.87e-07!97;UBERON:0003929!2.37e-07!54;UBERON:0003104!4.71e-07!238;UBERON:0009142!4.71e-07!238;UBERON:0000058!5.54e-07!26;UBERON:0001008!8.63e-07!45;UBERON:0005156!1.00e-06!59;UBERON:0000990!1.00e-06!59 | |ontology_enrichment_uberon=UBERON:0004119!4.87e-27!169;UBERON:0000925!4.87e-27!169;UBERON:0006595!4.87e-27!169;UBERON:0004921!1.63e-23!129;UBERON:0004185!1.63e-23!129;UBERON:0001007!3.99e-23!155;UBERON:0001555!3.99e-23!155;UBERON:0007026!3.99e-23!155;UBERON:0000077!5.88e-21!130;UBERON:0000062!4.08e-17!511;UBERON:0001041!4.61e-16!98;UBERON:0001004!2.39e-15!72;UBERON:0000466!1.78e-14!126;UBERON:0000064!2.61e-14!219;UBERON:0005911!6.88e-14!82;UBERON:0000065!5.59e-13!53;UBERON:0000464!5.11e-12!104;UBERON:0008947!1.11e-11!38;UBERON:0003258!1.11e-11!38;UBERON:0007023!1.15e-11!115;UBERON:0000481!2.32e-11!347;UBERON:0005177!7.70e-11!107;UBERON:0005153!7.05e-10!37;UBERON:0000072!1.18e-09!46;UBERON:0002530!2.52e-09!59;UBERON:0000922!3.13e-09!612;UBERON:0005157!7.62e-09!51;UBERON:0001048!8.67e-09!168;UBERON:0009569!1.81e-08!113;UBERON:0000468!3.58e-08!659;UBERON:0000480!4.12e-08!626;UBERON:0005181!4.73e-08!35;UBERON:0000467!6.16e-08!625;UBERON:0005178!7.79e-08!34;UBERON:0002224!7.79e-08!34;UBERON:0002050!9.79e-08!605;UBERON:0005423!9.79e-08!605;UBERON:0002048!1.41e-07!22;UBERON:0000117!1.41e-07!22;UBERON:0000171!1.41e-07!22;UBERON:0000170!1.41e-07!22;UBERON:0005597!1.41e-07!22;UBERON:0000118!1.41e-07!22;UBERON:0000923!1.78e-07!604;UBERON:0005291!1.78e-07!604;UBERON:0006598!1.78e-07!604;UBERON:0002532!1.78e-07!604;UBERON:0000063!1.87e-07!97;UBERON:0003929!2.37e-07!54;UBERON:0003104!4.71e-07!238;UBERON:0009142!4.71e-07!238;UBERON:0000058!5.54e-07!26;UBERON:0001008!8.63e-07!45;UBERON:0005156!1.00e-06!59;UBERON:0000990!1.00e-06!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.05e-14;33!UBERON:0000065;3.34e-12;44!UBERON:0001004;1.99e-10;65!UBERON:0005409;6.56e-10;22!UBERON:0000072;7.34e-10;37!UBERON:0002048;8.73e-10;22!UBERON:0000117;8.73e-10;22!UBERON:0000171;8.73e-10;22!UBERON:0000170;8.73e-10;22!UBERON:0004807;9.64e-10;22!UBERON:0005178;2.09e-09;34!UBERON:0002224;2.09e-09;34!UBERON:0005181;4.22e-09;35!UBERON:0002365;3.18e-08;31!UBERON:0002330;3.18e-08;31!UBERON:0000160;4.11e-08;17!UBERON:0001041;6.33e-08;14!UBERON:0004802;9.63e-08;19!UBERON:0000115;9.63e-08;19!UBERON:0001555;1.82e-07;54!UBERON:0000058;4.26e-07;10!UBERON:0001007;4.87e-07;81!UBERON:0005911;4.96e-07;36!UBERON:0005177;6.13e-07;99 | |||
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| ||
|short_description=p1@MYO5B | |short_description=p1@MYO5B | ||
}} | }} |
Latest revision as of 18:07, 19 September 2015
Short description: | p1@MYO5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYO5B_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000285039, NM_001080467, uc002leb.2_5end |
EntrezGene: | MYO5B |
HGNC: | 7603 |
UniProt: | Q9ULV0Q7Z7A5Q9H6Y6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.34e-27 | 253 |
endodermal cell | 1.07e-19 | 58 |
endo-epithelial cell | 2.01e-17 | 42 |
epithelial cell of alimentary canal | 9.35e-09 | 20 |
respiratory epithelial cell | 1.10e-08 | 13 |
epithelial cell of lung | 9.78e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.28e-21 | 106 |
cell type cancer | 2.45e-13 | 143 |
adenocarcinoma | 6.57e-10 | 25 |