FFCP PHASE1:Hg19::chrX:122318318..122318351,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2892 | |EntrezGene=2892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4573 | |HGNC=4573 | ||
|TSSclassifier=strong | |||
|UniProt=P42263 | |UniProt=P42263 | ||
|association_with_transcript=0bp_to_ENST00000371251,ENST00000371256_5end | |association_with_transcript=0bp_to_ENST00000371251,ENST00000371256_5end | ||
|cluster_id=chrX:122318318..122318351,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_GRIA3_5end | |description=CAGE_peak_3_at_GRIA3_5end | ||
|id=chrX:122318318..122318351,+ | |id=chrX:122318318..122318351,+ | ||
|ontology_enrichment_celltype=CL:0002620!5.94e-10!23;CL:0000047!9.77e-09!8 | |ontology_enrichment_celltype=CL:0002620!5.94e-10!23;CL:0000047!9.77e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.17e-18;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,7.11e-18,23;CL:0000047,6.64e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.64e-08;82!UBERON:0010122;3.71e-07;2 | |||
|ontology_enrichment_disease=DOID:17!9.46e-07!5;DOID:450!9.46e-07!5;DOID:66!9.46e-07!5;DOID:423!9.46e-07!5;DOID:0080000!9.46e-07!5;DOID:11722!9.46e-07!5 | |ontology_enrichment_disease=DOID:17!9.46e-07!5;DOID:450!9.46e-07!5;DOID:66!9.46e-07!5;DOID:423!9.46e-07!5;DOID:0080000!9.46e-07!5;DOID:11722!9.46e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;2.94e-12;5!DOID:450;2.94e-12;5!DOID:66;2.94e-12;5!DOID:423;2.94e-12;5!DOID:0080000;2.94e-12;5!DOID:11722;2.94e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.39e-12,5;DOID:450,1.39e-12,5;DOID:66,1.39e-12,5;DOID:423,1.39e-12,5;DOID:0080000,1.39e-12,5;DOID:11722,1.39e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.36e-43!82;UBERON:0005743!1.99e-41!86;UBERON:0001049!4.19e-38!57;UBERON:0005068!4.19e-38!57;UBERON:0006241!4.19e-38!57;UBERON:0007135!4.19e-38!57;UBERON:0000073!1.00e-37!94;UBERON:0001016!1.00e-37!94;UBERON:0002780!7.82e-35!41;UBERON:0001890!7.82e-35!41;UBERON:0006240!7.82e-35!41;UBERON:0003080!1.12e-33!42;UBERON:0000955!5.42e-33!69;UBERON:0006238!5.42e-33!69;UBERON:0002616!1.16e-32!59;UBERON:0001893!2.02e-32!34;UBERON:0002020!9.15e-32!34;UBERON:0003528!9.15e-32!34;UBERON:0002791!2.78e-31!33;UBERON:0001869!8.36e-31!32;UBERON:0002619!1.48e-26!22;UBERON:0002346!3.66e-24!90;UBERON:0001950!4.83e-24!20;UBERON:0003075!5.39e-24!86;UBERON:0007284!5.39e-24!86;UBERON:0000956!1.88e-22!25;UBERON:0000203!1.88e-22!25;UBERON:0000924!1.96e-20!173;UBERON:0006601!1.96e-20!173;UBERON:0003056!3.89e-20!61;UBERON:0004121!4.99e-20!169;UBERON:0007023!6.25e-20!115;UBERON:0000033!3.62e-17!123;UBERON:0000153!2.65e-16!129;UBERON:0007811!2.65e-16!129;UBERON:0000475!3.32e-12!365;UBERON:0002420!4.00e-12!9;UBERON:0007245!4.00e-12!9;UBERON:0010009!4.00e-12!9;UBERON:0010011!4.00e-12!9;UBERON:0000454!4.00e-12!9;UBERON:0002308!8.85e-11!9;UBERON:0000125!8.85e-11!9;UBERON:0002097!1.24e-09!40;UBERON:0009663!1.42e-09!7;UBERON:0000200!7.78e-09!6;UBERON:0002199!9.99e-09!45;UBERON:0002416!9.99e-09!45;UBERON:0001871!1.14e-08!7;UBERON:0000025!4.23e-08!194;UBERON:0000468!6.77e-08!659;UBERON:0000349!7.71e-08!5;UBERON:0002021!1.48e-07!5;UBERON:0001872!1.66e-07!5 | |ontology_enrichment_uberon=UBERON:0001017!4.36e-43!82;UBERON:0005743!1.99e-41!86;UBERON:0001049!4.19e-38!57;UBERON:0005068!4.19e-38!57;UBERON:0006241!4.19e-38!57;UBERON:0007135!4.19e-38!57;UBERON:0000073!1.00e-37!94;UBERON:0001016!1.00e-37!94;UBERON:0002780!7.82e-35!41;UBERON:0001890!7.82e-35!41;UBERON:0006240!7.82e-35!41;UBERON:0003080!1.12e-33!42;UBERON:0000955!5.42e-33!69;UBERON:0006238!5.42e-33!69;UBERON:0002616!1.16e-32!59;UBERON:0001893!2.02e-32!34;UBERON:0002020!9.15e-32!34;UBERON:0003528!9.15e-32!34;UBERON:0002791!2.78e-31!33;UBERON:0001869!8.36e-31!32;UBERON:0002619!1.48e-26!22;UBERON:0002346!3.66e-24!90;UBERON:0001950!4.83e-24!20;UBERON:0003075!5.39e-24!86;UBERON:0007284!5.39e-24!86;UBERON:0000956!1.88e-22!25;UBERON:0000203!1.88e-22!25;UBERON:0000924!1.96e-20!173;UBERON:0006601!1.96e-20!173;UBERON:0003056!3.89e-20!61;UBERON:0004121!4.99e-20!169;UBERON:0007023!6.25e-20!115;UBERON:0000033!3.62e-17!123;UBERON:0000153!2.65e-16!129;UBERON:0007811!2.65e-16!129;UBERON:0000475!3.32e-12!365;UBERON:0002420!4.00e-12!9;UBERON:0007245!4.00e-12!9;UBERON:0010009!4.00e-12!9;UBERON:0010011!4.00e-12!9;UBERON:0000454!4.00e-12!9;UBERON:0002308!8.85e-11!9;UBERON:0000125!8.85e-11!9;UBERON:0002097!1.24e-09!40;UBERON:0009663!1.42e-09!7;UBERON:0000200!7.78e-09!6;UBERON:0002199!9.99e-09!45;UBERON:0002416!9.99e-09!45;UBERON:0001871!1.14e-08!7;UBERON:0000025!4.23e-08!194;UBERON:0000468!6.77e-08!659;UBERON:0000349!7.71e-08!5;UBERON:0002021!1.48e-07!5;UBERON:0001872!1.66e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.13e-59;32!UBERON:0002619;2.32e-55;22!UBERON:0002791;3.21e-55;32!UBERON:0001893;3.50e-53;34!UBERON:0003528;2.88e-50;34!UBERON:0002020;2.88e-50;34!UBERON:0001950;5.88e-50;20!UBERON:0000956;3.38e-48;25!UBERON:0000203;3.38e-48;25!UBERON:0002780;7.21e-44;41!UBERON:0001890;7.21e-44;41!UBERON:0000073;1.32e-26;53!UBERON:0002616;1.32e-26;53!UBERON:0001017;3.52e-24;75!UBERON:0000955;1.29e-21;68!UBERON:0002420;9.53e-20;9!UBERON:0007245;9.53e-20;9!UBERON:0010009;9.53e-20;9!UBERON:0010011;9.53e-20;9!UBERON:0000454;9.53e-20;9!UBERON:0001016;8.19e-19;83!UBERON:0000200;5.87e-17;6!UBERON:0000349;6.47e-15;5!UBERON:0001871;9.82e-15;6!UBERON:0009663;1.91e-14;7!UBERON:0002021;2.98e-14;5!UBERON:0001872;4.24e-14;5!UBERON:0000369;2.38e-12;4!UBERON:0002435;2.38e-12;4!UBERON:0000204;2.38e-12;4!UBERON:0000125;4.78e-11;9!UBERON:0002308;4.78e-11;9!UBERON:0002097;1.98e-10;41!UBERON:0005383;6.85e-10;3!UBERON:0005382;6.85e-10;3!UBERON:0001870;2.17e-09;3!UBERON:0002199;4.23e-08;46!UBERON:0002416;4.23e-08;46!UBERON:0011216;1.14e-07;132!UBERON:0001873;3.71e-07;2!UBERON:0001876;3.99e-07;2!UBERON:0002771;5.16e-07;2!UBERON:0001954;5.39e-07;2!UBERON:0003022;5.39e-07;2!UBERON:0002421;5.39e-07;2!UBERON:0002600;5.39e-07;2!UBERON:0002702;7.35e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.70e-66,32;UBERON:0001893,5.36e-62,34;UBERON:0002780,1.05e-61,41;UBERON:0001890,1.05e-61,41;UBERON:0003080,1.05e-61,41;UBERON:0006240,1.05e-61,41;UBERON:0002791,1.18e-61,32;UBERON:0003528,1.22e-57,34;UBERON:0002020,1.22e-57,34;UBERON:0002619,1.82e-55,22;UBERON:0001017,3.23e-54,81;UBERON:0001950,4.44e-50,20;UBERON:0000073,5.81e-49,53;UBERON:0002616,5.81e-49,53;UBERON:0001049,1.05e-48,56;UBERON:0005068,1.05e-48,56;UBERON:0006241,1.05e-48,56;UBERON:0007135,1.05e-48,56;UBERON:0000956,2.73e-48,25;UBERON:0000203,2.73e-48,25;UBERON:0001016,1.08e-47,89;UBERON:0000955,7.60e-46,68;UBERON:0006238,7.60e-46,68;UBERON:0003056,1.08e-38,61;UBERON:0003075,2.44e-32,82;UBERON:0007284,2.44e-32,82;UBERON:0002346,2.18e-30,86;UBERON:0010371,1.17e-26,104;UBERON:0004121,2.37e-24,171;UBERON:0000924,2.37e-24,171;UBERON:0006601,2.37e-24,171;UBERON:0002420,7.17e-20,9;UBERON:0007245,7.17e-20,9;UBERON:0010009,7.17e-20,9;UBERON:0010011,7.17e-20,9;UBERON:0000454,7.17e-20,9;UBERON:0010314,4.77e-19,132;UBERON:0007023,3.47e-18,114;UBERON:0000200,5.44e-17,6;UBERON:0011216,5.61e-15,223;UBERON:0000349,6.97e-15,5;UBERON:0001871,9.31e-15,6;UBERON:0009663,1.45e-14,7;UBERON:0002021,2.76e-14,5;UBERON:0001872,3.53e-14,5;UBERON:0002097,3.07e-13,41;UBERON:0000369,2.42e-12,4;UBERON:0002435,2.42e-12,4;UBERON:0000204,2.42e-12,4;UBERON:0010082,2.42e-12,4;UBERON:0002199,2.34e-11,46;UBERON:0002416,2.34e-11,46;UBERON:0000125,3.88e-11,9;UBERON:0002308,3.88e-11,9;UBERON:0005383,6.77e-10,3;UBERON:0005382,6.77e-10,3;UBERON:0001870,2.27e-09,3;UBERON:0000025,2.67e-09,192;UBERON:0004111,2.02e-07,240;UBERON:0001873,3.67e-07,2;UBERON:0010122,3.67e-07,2;UBERON:0001876,4.00e-07,2;UBERON:0002771,5.03e-07,2;UBERON:0001954,5.63e-07,2;UBERON:0003022,5.63e-07,2;UBERON:0002421,5.63e-07,2;UBERON:0002600,5.63e-07,2;UBERON:0002702,7.47e-07,2 | |||
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| ||
|short_description=p3@GRIA3 | |short_description=p3@GRIA3 | ||
}} | }} |
Latest revision as of 07:18, 19 September 2015
Short description: | p3@GRIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRIA3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000371251, ENST00000371256_5end |
EntrezGene: | GRIA3 |
HGNC: | 4573 |
UniProt: | P42263 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 7.11e-18 | 23 |
neuronal stem cell | 6.64e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.39e-12 | 5 |
myotonic disease | 1.39e-12 | 5 |
muscle tissue disease | 1.39e-12 | 5 |
myopathy | 1.39e-12 | 5 |
muscular disease | 1.39e-12 | 5 |
myotonic dystrophy | 1.39e-12 | 5 |