FFCP PHASE1:Hg19::chr15:48703464..48703484,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:48703464..48703484,- | |||
|coexpression_cluster_id=C834 | |||
|description=CAGE_peak_at_chr15:48703464..48703484,- | |description=CAGE_peak_at_chr15:48703464..48703484,- | ||
|id=chr15:48703464..48703484,- | |id=chr15:48703464..48703484,- | ||
|ontology_enrichment_celltype=CL:0000055!9.56e-28!180;CL:0000057!6.63e-20!75;CL:0000680!2.10e-12!57;CL:0000056!2.10e-12!57;CL:0000355!2.10e-12!57;CL:0002620!4.12e-12!23;CL:0000187!3.28e-11!54;CL:0000048!2.34e-10!430;CL:0000183!6.42e-10!59;CL:0000723!1.27e-09!436;CL:0000393!6.63e-09!60;CL:0000211!6.63e-09!60;CL:0000192!7.06e-09!42;CL:0000514!7.06e-09!42;CL:0000034!1.07e-08!444;CL:0002371!2.22e-08!591;CL:0000144!2.70e-07!625;CL:0000359!3.29e-07!32;CL:0002334!7.20e-07!12;CL:0000222!7.42e-07!119 | |ontology_enrichment_celltype=CL:0000055!9.56e-28!180;CL:0000057!6.63e-20!75;CL:0000680!2.10e-12!57;CL:0000056!2.10e-12!57;CL:0000355!2.10e-12!57;CL:0002620!4.12e-12!23;CL:0000187!3.28e-11!54;CL:0000048!2.34e-10!430;CL:0000183!6.42e-10!59;CL:0000723!1.27e-09!436;CL:0000393!6.63e-09!60;CL:0000211!6.63e-09!60;CL:0000192!7.06e-09!42;CL:0000514!7.06e-09!42;CL:0000034!1.07e-08!444;CL:0002371!2.22e-08!591;CL:0000144!2.70e-07!625;CL:0000359!3.29e-07!32;CL:0002334!7.20e-07!12;CL:0000222!7.42e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.51e-11;23!CL:0002334;1.98e-10;12!CL:0000134;1.05e-09;55!CL:1000306;3.62e-09;4!CL:0002547;3.62e-09;4!CL:0000153;2.52e-08;9!CL:0000447;2.52e-08;9!CL:0000048;5.36e-08;58!CL:0002580;9.54e-08;3!CL:0002579;2.72e-07;3!CL:0000349;2.80e-07;19!CL:0002320;3.45e-07;188!CL:0000135;5.82e-07;3!CL:0000388;5.82e-07;3!CL:0000723;8.31e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.17e-19,76;CL:0000048,1.87e-12,427;CL:0000723,5.16e-12,433;CL:0000034,1.91e-11,441;CL:0002620,1.93e-11,23;CL:0000134,4.41e-11,354;CL:0002320,1.52e-10,361;CL:0002334,2.22e-10,12;CL:0000219,1.04e-09,386;CL:1000306,3.65e-09,4;CL:0002547,3.65e-09,4;CL:0000153,4.03e-08,9;CL:0000447,4.03e-08,9;CL:0002580,9.62e-08,3;CL:0002579,1.90e-07,3;CL:0000349,2.21e-07,19;CL:0000135,4.37e-07,3;CL:0000388,4.37e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;9.71e-08;5!DOID:450;9.71e-08;5!DOID:66;9.71e-08;5!DOID:423;9.71e-08;5!DOID:0080000;9.71e-08;5!DOID:11722;9.71e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.79e-08,5;DOID:450,9.79e-08,5;DOID:66,9.79e-08,5;DOID:423,9.79e-08,5;DOID:0080000,9.79e-08,5;DOID:11722,9.79e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.61e-12!61;UBERON:0002036!3.61e-12!61;UBERON:0003082!3.61e-12!61;UBERON:0000914!7.58e-12!83;UBERON:0002329!7.58e-12!83;UBERON:0003077!7.58e-12!83;UBERON:0003059!7.58e-12!83;UBERON:0007282!7.58e-12!83;UBERON:0009618!7.58e-12!83;UBERON:0007285!7.58e-12!83;UBERON:0004290!1.38e-11!70;UBERON:0002385!2.39e-11!63;UBERON:0001015!2.39e-11!63;UBERON:0000383!2.39e-11!63;UBERON:0000486!6.15e-10!82;UBERON:0004872!2.76e-09!84;UBERON:0005256!3.87e-09!143;UBERON:0004923!7.16e-08!57;UBERON:0002199!1.77e-07!45;UBERON:0002416!1.77e-07!45;UBERON:0000475!5.67e-07!365;UBERON:0001637!6.65e-07!42;UBERON:0003509!6.65e-07!42;UBERON:0004572!6.65e-07!42;UBERON:0002097!7.65e-07!40;UBERON:0002100!8.14e-07!216;UBERON:0002049!8.35e-07!79;UBERON:0007798!8.35e-07!79 | |ontology_enrichment_uberon=UBERON:0001134!3.61e-12!61;UBERON:0002036!3.61e-12!61;UBERON:0003082!3.61e-12!61;UBERON:0000914!7.58e-12!83;UBERON:0002329!7.58e-12!83;UBERON:0003077!7.58e-12!83;UBERON:0003059!7.58e-12!83;UBERON:0007282!7.58e-12!83;UBERON:0009618!7.58e-12!83;UBERON:0007285!7.58e-12!83;UBERON:0004290!1.38e-11!70;UBERON:0002385!2.39e-11!63;UBERON:0001015!2.39e-11!63;UBERON:0000383!2.39e-11!63;UBERON:0000486!6.15e-10!82;UBERON:0004872!2.76e-09!84;UBERON:0005256!3.87e-09!143;UBERON:0004923!7.16e-08!57;UBERON:0002199!1.77e-07!45;UBERON:0002416!1.77e-07!45;UBERON:0000475!5.67e-07!365;UBERON:0001637!6.65e-07!42;UBERON:0003509!6.65e-07!42;UBERON:0004572!6.65e-07!42;UBERON:0002097!7.65e-07!40;UBERON:0002100!8.14e-07!216;UBERON:0002049!8.35e-07!79;UBERON:0007798!8.35e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.34e-11;9!UBERON:0000042;1.34e-11;9!UBERON:0004797;3.62e-09;4!UBERON:0000415;3.62e-09;4!UBERON:0007240;3.62e-09;4!UBERON:0005742;3.62e-09;4!UBERON:0005734;3.62e-09;4!UBERON:0004664;3.62e-09;4!UBERON:0004663;3.62e-09;4!UBERON:0003688;3.95e-09;6!UBERON:0002358;3.95e-09;6!UBERON:0003684;3.95e-09;6!UBERON:0001178;3.95e-09;6!UBERON:0002384;5.92e-08;198!UBERON:0007846;5.82e-07;3!UBERON:0000043;5.82e-07;3!UBERON:0007845;5.82e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.70e-11,371;UBERON:0003688,3.07e-09,6;UBERON:0002358,3.07e-09,6;UBERON:0003684,3.07e-09,6;UBERON:0001178,3.07e-09,6;UBERON:0000415,3.65e-09,4;UBERON:0007240,3.65e-09,4;UBERON:0005742,3.65e-09,4;UBERON:0005734,3.65e-09,4;UBERON:0004664,3.65e-09,4;UBERON:0004663,3.65e-09,4;UBERON:0004457,2.03e-08,12;UBERON:0000042,2.03e-08,12;UBERON:0002199,4.52e-08,46;UBERON:0002416,4.52e-08,46;UBERON:0002097,2.85e-07,41;UBERON:0007846,4.37e-07,3;UBERON:0000043,4.37e-07,3;UBERON:0007845,4.37e-07,3;UBERON:0004923,4.77e-07,66 | |||
|phase1_expression=2.54349730978779,5.35251309727458,2.81908808191942,2.00146596706261,0.446961094427288,3.48935409640147,0,0,0.783556884599516,0,0,0.218441372130172,0.791300934685361,0.123766352960047,0,1.34465029290355,0.602694528023977,1.46062018077475,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,0.670700859703636,0.12786256184353,1.0843174571537,2.00535164254356,3.18662341713812,0,1.45990461090791,0.567208902984407,0.886917589850256,1.05401742831751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0.267899184852239,0,0,0,0,0,0,0,0,8.94549513051573,2.5326102332916,1.45650098894541,6.3104056564739,2.12801029319014,0,1.06748995729705,0.49333509683432,0,0.538842688278752,0.326923806226917,0.151357427644931,4.03323147135999,0,0,0,0,0.117434498643765,0.485618833104395,0.421352420106746,0.61246251376468,0.122834317311768,0.206651562351531,0,0.494533858557114,0,0,0.336672227908132,0.250237039743928,0,0.438977620880838,1.22595118319608,0.150238058906597,0.340296549480063,3.40840307808838,3.20336083227851,2.33125091275518,3.90118424909723,0.824420233907511,4.63752972082133,1.8611685633159,3.71307930930786,1.26668106709558,3.78650661366172,2.02509777013059,1.61646056818812,4.61512470271599,0.806016785821122,0.67824236924195,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0.115930404975077,1.52631302506568,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0.646358578788889,0,0,1.32969058292435,0,0,0,0,1.42977993658148,1.62786481617433,0,0,1.06617584622764,0,0,0,0.199945982364114,0,0,0,2.39624855491583,1.14861935834114,0,1.30303176000821,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.831883446123229,1.96271887676878,2.20783381047509,1.63997980989798,0.300946099727719,0,0,1.32845119707087,0.553107505625109,0.695068915744663,0,0.343143423810856,0,0,0,0.303127571446259,1.66435439510497,0,3.2254015016441,4.29693525206575,2.52594084989766,2.30650468660262,2.55853624533352,2.89537058058494,0,1.07946785661859,1.24293207719189,0.657017248110473,0,0.464841513839837,0,0,0,0.34444334449382,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.647747748306418,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.650756789328606,0,0,0,0,0,11.2478750890912,0.676695028044854,0,0.767518373630648,0,0.751941714077915,0.435050081742686,0.340906509664404,0.267096106940212,0,0.192190067365106,0,0,0,4.09256050879832,0.6970372701606,0.308033580176089,0.532306030317022,1.73986598415015,0.18532421910392,0.143124886741991,0,0.632758849437452,0.38126038784765,0,3.42351190427136,0,0,0.179872457583315,0.823611089208164,0.589062011728432,0.202182481573316,0,0,0.975267478179181,1.21856744815642,0,0.682499557039929,1.27264888758341,2.26016233240486,1.65409603063837,0.66343897524122,0.876901770507525,0,0.655894752046633,0,0.6196469961995,0.563391205064483,0.286822704408103,0.982490410131212,0.35667105148125,0,3.16661452946496,5.26871828735843,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0.296964680832639,1.84296421259539,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0.20453736500431,0,3.73247505194169,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,1.48124672601102,0,0,0,3.50901275705111,0.274792780205587,9.59462596833542,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0.193978032976839,0,0.451961481561065,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0,0,0,1.08723364858891,1.46443984837266,0,0,0,0,0,1.28929632425987,0,0,0.458320848023367,0,0,0,0.223171457441873,0.0671834724867263,2.88239906833923,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,1.08599920350743,2.5926644736038,0.653174720218818,1.19730191562487,0,1.5334921960688,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.895528817321244,1.40227985908335,1.10961172300523,0.378806010550178,1.76097531226803,4.44905610798268,0.915360273587694,1.05861646634267,2.02068360757615,0.73927574994817,0.477890301491107,0,0.310525913752519,2.07353103920428,0.797525143673985,1.04349012362347,0.601030435988874,0.380805212168795,0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| ||
|short_description=p@chr15:48703464..48703484,- | |short_description=p@chr15:48703464..48703484,- | ||
}} | }} |
Latest revision as of 02:09, 25 July 2015
Short description: | p@chr15:48703464..48703484, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:48703464..48703484, - |
Coexpression cluster: | C834_Fibroblast_Sertoli_chorionic_Smooth_Synoviocyte_Preadipocyte_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.17e-19 | 76 |
multi fate stem cell | 1.87e-12 | 427 |
somatic stem cell | 5.16e-12 | 433 |
stem cell | 1.91e-11 | 441 |
skin fibroblast | 1.93e-11 | 23 |
mesenchymal cell | 4.41e-11 | 354 |
connective tissue cell | 1.52e-10 | 361 |
preadipocyte | 2.22e-10 | 12 |
motile cell | 1.04e-09 | 386 |
fibroblast of tunica adventitia of artery | 3.65e-09 | 4 |
fibroblast of the aortic adventitia | 3.65e-09 | 4 |
GAG secreting cell | 4.03e-08 | 9 |
carbohydrate secreting cell | 4.03e-08 | 9 |
preadipocyte of the breast | 9.62e-08 | 3 |
omentum preadipocyte | 1.90e-07 | 3 |
extraembryonic cell | 2.21e-07 | 19 |
fibrocyte | 4.37e-07 | 3 |
tendon cell | 4.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.70e-11 | 371 |
omentum | 3.07e-09 | 6 |
peritoneum | 3.07e-09 | 6 |
abdominal cavity | 3.07e-09 | 6 |
visceral peritoneum | 3.07e-09 | 6 |
artery wall | 3.65e-09 | 4 |
tunica adventitia of artery | 3.65e-09 | 4 |
adventitia | 3.65e-09 | 4 |
tunica adventitia of blood vessel | 3.65e-09 | 4 |
aorta tunica adventitia | 3.65e-09 | 4 |
aorta wall | 3.65e-09 | 4 |
cavity lining | 2.03e-08 | 12 |
serous membrane | 2.03e-08 | 12 |
integument | 4.52e-08 | 46 |
integumental system | 4.52e-08 | 46 |
skin of body | 2.85e-07 | 41 |
dense regular connective tissue | 4.37e-07 | 3 |
tendon | 4.37e-07 | 3 |
regular connective tissue | 4.37e-07 | 3 |
organ component layer | 4.77e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.79e-08 | 5 |
myotonic disease | 9.79e-08 | 5 |
muscle tissue disease | 9.79e-08 | 5 |
myopathy | 9.79e-08 | 5 |
muscular disease | 9.79e-08 | 5 |
myotonic dystrophy | 9.79e-08 | 5 |