FFCP PHASE1:Hg19::chr8:4852550..4852596,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64478 | |EntrezGene=64478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14026 | |HGNC=14026 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIG2 | |UniProt=E5RIG2 | ||
|association_with_transcript=-56bp_to_ENST00000520002_5end | |association_with_transcript=-56bp_to_ENST00000520002_5end | ||
|cluster_id=chr8:4852550..4852596,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_CSMD1_5end | |description=CAGE_peak_2_at_CSMD1_5end | ||
|id=chr8:4852550..4852596,- | |id=chr8:4852550..4852596,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.88e-16;82!UBERON:0006215;4.43e-11;3!UBERON:0006241;6.20e-11;3!UBERON:0003057;6.20e-11;3!UBERON:0010122;7.58e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.31e-72!57;UBERON:0005068!3.31e-72!57;UBERON:0006241!3.31e-72!57;UBERON:0007135!3.31e-72!57;UBERON:0001017!1.43e-69!82;UBERON:0005743!5.06e-68!86;UBERON:0000073!3.34e-62!94;UBERON:0001016!3.34e-62!94;UBERON:0002616!5.91e-60!59;UBERON:0001893!1.36e-58!34;UBERON:0002020!1.56e-58!34;UBERON:0003528!1.56e-58!34;UBERON:0002346!1.01e-57!90;UBERON:0002780!6.98e-57!41;UBERON:0001890!6.98e-57!41;UBERON:0006240!6.98e-57!41;UBERON:0002791!1.30e-56!33;UBERON:0000955!1.90e-56!69;UBERON:0006238!1.90e-56!69;UBERON:0003075!6.19e-56!86;UBERON:0007284!6.19e-56!86;UBERON:0001869!2.66e-55!32;UBERON:0003080!2.76e-55!42;UBERON:0007023!3.36e-50!115;UBERON:0002619!7.45e-44!22;UBERON:0000956!2.26e-41!25;UBERON:0000203!2.26e-41!25;UBERON:0001950!1.00e-39!20;UBERON:0003056!6.01e-39!61;UBERON:0000924!7.35e-37!173;UBERON:0006601!7.35e-37!173;UBERON:0004121!4.44e-35!169;UBERON:0000033!9.32e-33!123;UBERON:0000153!6.45e-32!129;UBERON:0007811!6.45e-32!129;UBERON:0002420!4.98e-19!9;UBERON:0007245!4.98e-19!9;UBERON:0010009!4.98e-19!9;UBERON:0010011!4.98e-19!9;UBERON:0000454!4.98e-19!9;UBERON:0002308!2.35e-18!9;UBERON:0000125!2.35e-18!9;UBERON:0003076!2.97e-17!15;UBERON:0003057!2.97e-17!15;UBERON:0000025!1.87e-15!194;UBERON:0009663!6.75e-15!7;UBERON:0000200!8.71e-14!6;UBERON:0001871!1.04e-13!7;UBERON:0000064!2.26e-12!219;UBERON:0004733!2.56e-12!12;UBERON:0002028!2.56e-12!12;UBERON:0007277!2.56e-12!12;UBERON:0002021!7.31e-12!5;UBERON:0000349!8.14e-12!5;UBERON:0004111!1.24e-11!241;UBERON:0001872!1.72e-11!5;UBERON:0002298!1.85e-11!8;UBERON:0004732!3.20e-11!13;UBERON:0000369!9.32e-10!4;UBERON:0002435!9.32e-10!4;UBERON:0000204!9.32e-10!4;UBERON:0010082!9.32e-10!4;UBERON:0000477!2.48e-09!286;UBERON:0000483!1.85e-08!309;UBERON:0000119!3.05e-08!312;UBERON:0002771!6.89e-08!3;UBERON:0005383!8.03e-08!3;UBERON:0005382!8.03e-08!3;UBERON:0002680!8.13e-08!9;UBERON:0001895!8.13e-08!9;UBERON:0010092!8.13e-08!9;UBERON:0002240!6.35e-07!3;UBERON:0000475!8.31e-07!365;UBERON:0000988!8.42e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!3.31e-72!57;UBERON:0005068!3.31e-72!57;UBERON:0006241!3.31e-72!57;UBERON:0007135!3.31e-72!57;UBERON:0001017!1.43e-69!82;UBERON:0005743!5.06e-68!86;UBERON:0000073!3.34e-62!94;UBERON:0001016!3.34e-62!94;UBERON:0002616!5.91e-60!59;UBERON:0001893!1.36e-58!34;UBERON:0002020!1.56e-58!34;UBERON:0003528!1.56e-58!34;UBERON:0002346!1.01e-57!90;UBERON:0002780!6.98e-57!41;UBERON:0001890!6.98e-57!41;UBERON:0006240!6.98e-57!41;UBERON:0002791!1.30e-56!33;UBERON:0000955!1.90e-56!69;UBERON:0006238!1.90e-56!69;UBERON:0003075!6.19e-56!86;UBERON:0007284!6.19e-56!86;UBERON:0001869!2.66e-55!32;UBERON:0003080!2.76e-55!42;UBERON:0007023!3.36e-50!115;UBERON:0002619!7.45e-44!22;UBERON:0000956!2.26e-41!25;UBERON:0000203!2.26e-41!25;UBERON:0001950!1.00e-39!20;UBERON:0003056!6.01e-39!61;UBERON:0000924!7.35e-37!173;UBERON:0006601!7.35e-37!173;UBERON:0004121!4.44e-35!169;UBERON:0000033!9.32e-33!123;UBERON:0000153!6.45e-32!129;UBERON:0007811!6.45e-32!129;UBERON:0002420!4.98e-19!9;UBERON:0007245!4.98e-19!9;UBERON:0010009!4.98e-19!9;UBERON:0010011!4.98e-19!9;UBERON:0000454!4.98e-19!9;UBERON:0002308!2.35e-18!9;UBERON:0000125!2.35e-18!9;UBERON:0003076!2.97e-17!15;UBERON:0003057!2.97e-17!15;UBERON:0000025!1.87e-15!194;UBERON:0009663!6.75e-15!7;UBERON:0000200!8.71e-14!6;UBERON:0001871!1.04e-13!7;UBERON:0000064!2.26e-12!219;UBERON:0004733!2.56e-12!12;UBERON:0002028!2.56e-12!12;UBERON:0007277!2.56e-12!12;UBERON:0002021!7.31e-12!5;UBERON:0000349!8.14e-12!5;UBERON:0004111!1.24e-11!241;UBERON:0001872!1.72e-11!5;UBERON:0002298!1.85e-11!8;UBERON:0004732!3.20e-11!13;UBERON:0000369!9.32e-10!4;UBERON:0002435!9.32e-10!4;UBERON:0000204!9.32e-10!4;UBERON:0010082!9.32e-10!4;UBERON:0000477!2.48e-09!286;UBERON:0000483!1.85e-08!309;UBERON:0000119!3.05e-08!312;UBERON:0002771!6.89e-08!3;UBERON:0005383!8.03e-08!3;UBERON:0005382!8.03e-08!3;UBERON:0002680!8.13e-08!9;UBERON:0001895!8.13e-08!9;UBERON:0010092!8.13e-08!9;UBERON:0002240!6.35e-07!3;UBERON:0000475!8.31e-07!365;UBERON:0000988!8.42e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.49e-80;32!UBERON:0002619;8.08e-76;22!UBERON:0002791;1.13e-75;32!UBERON:0003528;4.63e-73;34!UBERON:0002020;4.63e-73;34!UBERON:0001893;5.84e-73;34!UBERON:0001950;1.53e-68;20!UBERON:0000956;2.20e-66;25!UBERON:0000203;2.20e-66;25!UBERON:0002780;3.93e-60;41!UBERON:0001890;3.93e-60;41!UBERON:0000073;8.06e-49;53!UBERON:0002616;8.06e-49;53!UBERON:0001017;1.30e-38;75!UBERON:0000955;1.22e-37;68!UBERON:0001016;8.60e-33;83!UBERON:0002420;5.65e-26;9!UBERON:0007245;5.65e-26;9!UBERON:0010009;5.65e-26;9!UBERON:0010011;5.65e-26;9!UBERON:0000454;5.65e-26;9!UBERON:0000200;8.93e-23;6!UBERON:0001871;1.41e-19;6!UBERON:0000125;1.68e-19;9!UBERON:0002308;1.68e-19;9!UBERON:0002021;1.87e-19;5!UBERON:0000349;1.90e-19;5!UBERON:0009663;6.44e-19;7!UBERON:0001872;8.59e-19;5!UBERON:0000369;8.13e-16;4!UBERON:0002435;8.13e-16;4!UBERON:0000204;8.13e-16;4!UBERON:0007023;1.34e-14;114!UBERON:0011216;5.61e-13;132!UBERON:0005383;1.93e-12;3!UBERON:0005382;1.93e-12;3!UBERON:0001870;2.56e-12;3!UBERON:0002240;6.20e-11;3!UBERON:0005174;6.20e-11;3!UBERON:0001137;6.20e-11;3!UBERON:0004733;8.88e-10;12!UBERON:0002028;8.88e-10;12!UBERON:0002680;1.89e-09;9!UBERON:0001895;1.89e-09;9!UBERON:0002771;5.16e-09;2!UBERON:0002702;5.37e-09;2!UBERON:0004732;5.59e-09;13!UBERON:0001876;6.02e-09;2!UBERON:0001873;7.58e-09;2!UBERON:0001954;7.72e-09;2!UBERON:0003022;7.72e-09;2!UBERON:0002421;7.72e-09;2!UBERON:0002600;7.72e-09;2!UBERON:0010314;1.72e-08;132!UBERON:0001875;4.27e-08;2!UBERON:0006514;4.27e-08;2!UBERON:0001897;8.43e-08;2!UBERON:0010225;8.43e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.37e-100,56;UBERON:0005068,3.37e-100,56;UBERON:0006241,3.37e-100,56;UBERON:0007135,3.37e-100,56;UBERON:0000073,5.00e-91,53;UBERON:0002616,5.00e-91,53;UBERON:0001869,1.31e-90,32;UBERON:0001893,5.40e-85,34;UBERON:0003528,7.15e-85,34;UBERON:0002020,7.15e-85,34;UBERON:0002780,1.01e-84,41;UBERON:0001890,1.01e-84,41;UBERON:0003080,1.01e-84,41;UBERON:0006240,1.01e-84,41;UBERON:0002791,2.63e-84,32;UBERON:0001017,3.09e-84,81;UBERON:0000955,3.58e-80,68;UBERON:0006238,3.58e-80,68;UBERON:0002619,8.10e-76,22;UBERON:0001016,5.48e-75,89;UBERON:0002346,2.87e-69,86;UBERON:0001950,1.40e-68,20;UBERON:0000956,2.20e-66,25;UBERON:0000203,2.20e-66,25;UBERON:0003075,9.23e-66,82;UBERON:0007284,9.23e-66,82;UBERON:0003056,1.01e-54,61;UBERON:0010371,6.15e-50,104;UBERON:0007023,1.14e-44,114;UBERON:0004121,1.70e-40,171;UBERON:0000924,1.70e-40,171;UBERON:0006601,1.70e-40,171;UBERON:0010314,1.35e-39,132;UBERON:0011216,3.46e-27,223;UBERON:0002420,5.85e-26,9;UBERON:0007245,5.85e-26,9;UBERON:0010009,5.85e-26,9;UBERON:0010011,5.85e-26,9;UBERON:0000454,5.85e-26,9;UBERON:0000200,7.98e-23,6;UBERON:0000025,1.00e-22,192;UBERON:0001871,1.41e-19,6;UBERON:0000125,1.73e-19,9;UBERON:0002308,1.73e-19,9;UBERON:0002021,1.80e-19,5;UBERON:0000349,2.17e-19,5;UBERON:0009663,6.64e-19,7;UBERON:0001872,7.98e-19,5;UBERON:0003076,6.11e-17,15;UBERON:0003057,6.11e-17,15;UBERON:0004111,2.82e-16,240;UBERON:0000369,8.29e-16,4;UBERON:0002435,8.29e-16,4;UBERON:0000204,8.29e-16,4;UBERON:0010082,8.29e-16,4;UBERON:0005383,1.89e-12,3;UBERON:0005382,1.89e-12,3;UBERON:0001870,2.76e-12,3;UBERON:0002240,6.77e-11,3;UBERON:0005174,6.77e-11,3;UBERON:0001137,6.77e-11,3;UBERON:0000483,9.83e-11,306;UBERON:0000119,1.54e-10,309;UBERON:0004733,9.03e-10,12;UBERON:0002028,9.03e-10,12;UBERON:0007277,9.03e-10,12;UBERON:0002680,2.06e-09,9;UBERON:0001895,2.06e-09,9;UBERON:0010092,2.06e-09,9;UBERON:0002771,4.97e-09,2;UBERON:0002702,5.58e-09,2;UBERON:0004732,5.67e-09,13;UBERON:0001876,6.02e-09,2;UBERON:0001873,7.58e-09,2;UBERON:0010122,7.58e-09,2;UBERON:0001954,8.49e-09,2;UBERON:0003022,8.49e-09,2;UBERON:0002421,8.49e-09,2;UBERON:0002600,8.49e-09,2;UBERON:0001875,4.35e-08,2;UBERON:0006514,4.35e-08,2;UBERON:0001897,8.89e-08,2;UBERON:0010225,8.89e-08,2 | |||
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|short_description=p2@CSMD1 | |short_description=p2@CSMD1 | ||
}} | }} |
Latest revision as of 09:38, 18 September 2015
Short description: | p2@CSMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CSMD1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -56bp_to_ENST00000520002_5end |
EntrezGene: | CSMD1 |
HGNC: | 14026 |
UniProt: | E5RIG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data