FFCP PHASE1:Hg19::chr16:81679223..81679271,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:81679223..81679271,+
|short_description=p@chr16:81679223..81679271,+
|description=CAGE_peak_at_chr16:81679223..81679271,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:81679223..81679271,+ | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_at_chr16:81679223..81679271,+ | |||
|id=chr16:81679223..81679271,+ | |||
|ontology_enrichment_celltype=CL:0000349!2.74e-07!3;CL:0002577!2.74e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.96e-34;19!CL:0002577;7.16e-22;3!CL:0002536;6.67e-15;2!CL:0002537;1.08e-12;5!CL:0002541;7.67e-10;3!CL:0002553;4.55e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.16e-34,19;CL:0002577,6.92e-22,3;CL:0002536,7.40e-15,2;CL:0002537,7.68e-13,5;CL:0002541,7.18e-10,3;CL:0002553,4.40e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr16:81679223..81679271,+ | |||
}} | }} |
Latest revision as of 12:43, 25 July 2015
Short description: | p@chr16:81679223..81679271, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:81679223..81679271, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.16e-34 | 19 |
placental epithelial cell | 6.92e-22 | 3 |
amniotic epithelial cell | 7.40e-15 | 2 |
amnion mesenchymal stem cell | 7.68e-13 | 5 |
chorionic membrane mesenchymal stem cell | 7.18e-10 | 3 |
lung fibroblast | 4.40e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.89e-47 | 14 |
membranous layer | 2.89e-47 | 14 |
extraembryonic structure | 7.08e-27 | 24 |
chorion | 1.44e-24 | 7 |
amnion | 2.57e-24 | 7 |
somatic layer of lateral plate mesoderm | 2.91e-21 | 8 |
placenta | 1.47e-16 | 4 |
allantois | 1.47e-16 | 4 |
pituitary gland | 3.70e-15 | 2 |
egg chorion | 7.18e-10 | 3 |
diencephalon | 2.01e-09 | 7 |
future diencephalon | 2.01e-09 | 7 |
organ component layer | 1.12e-08 | 66 |
gland of diencephalon | 5.23e-08 | 4 |
neuroendocrine gland | 5.23e-08 | 4 |
lower lobe of right lung | 9.94e-08 | 1 |
right lung lobe | 9.94e-08 | 1 |
lower lobe of lung | 9.94e-08 | 1 |
lobe of lung | 9.94e-08 | 1 |
right lung | 9.94e-08 | 1 |
epididymis | 1.06e-07 | 1 |
putamen | 1.14e-07 | 1 |