FFCP PHASE1:Hg19::chr8:145640490..145640504,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55630 | |EntrezGene=55630 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=17129 | |HGNC=17129 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=253bp_to_uc003zco.2_5end | |association_with_transcript=253bp_to_uc003zco.2_5end | ||
|cluster_id=chr8:145640490..145640504,- | |||
|coexpression_cluster_id=C124 | |||
|description=CAGE_peak_7_at_SLC39A4_5end | |description=CAGE_peak_7_at_SLC39A4_5end | ||
|id=chr8:145640490..145640504,- | |id=chr8:145640490..145640504,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.53e-14!115;UBERON:0001869!8.20e-12!32;UBERON:0002619!1.83e-11!22;UBERON:0001893!4.91e-11!34;UBERON:0000956!5.30e-10!25;UBERON:0000203!5.30e-10!25;UBERON:0001950!9.05e-10!20;UBERON:0002791!2.94e-09!33;UBERON:0002020!5.96e-09!34;UBERON:0003528!5.96e-09!34;UBERON:0002780!6.69e-09!41;UBERON:0001890!6.69e-09!41;UBERON:0006240!6.69e-09!41;UBERON:0003080!1.18e-08!42;UBERON:0005409!1.53e-07!35;UBERON:0002106!3.72e-07!3;UBERON:0004854!3.72e-07!3;UBERON:0009034!3.72e-07!3;UBERON:0002095!3.72e-07!3;UBERON:0004782!3.72e-07!3;UBERON:0003281!3.72e-07!3;UBERON:0009664!3.72e-07!3;UBERON:0002296!3.72e-07!3;UBERON:0005602!3.72e-07!3;UBERON:0001179!3.72e-07!3;UBERON:0006293!3.72e-07!3;UBERON:0000200!3.92e-07!6;UBERON:0000481!6.12e-07!347;UBERON:0004921!7.26e-07!129;UBERON:0004185!7.26e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!2.53e-14!115;UBERON:0001869!8.20e-12!32;UBERON:0002619!1.83e-11!22;UBERON:0001893!4.91e-11!34;UBERON:0000956!5.30e-10!25;UBERON:0000203!5.30e-10!25;UBERON:0001950!9.05e-10!20;UBERON:0002791!2.94e-09!33;UBERON:0002020!5.96e-09!34;UBERON:0003528!5.96e-09!34;UBERON:0002780!6.69e-09!41;UBERON:0001890!6.69e-09!41;UBERON:0006240!6.69e-09!41;UBERON:0003080!1.18e-08!42;UBERON:0005409!1.53e-07!35;UBERON:0002106!3.72e-07!3;UBERON:0004854!3.72e-07!3;UBERON:0009034!3.72e-07!3;UBERON:0002095!3.72e-07!3;UBERON:0004782!3.72e-07!3;UBERON:0003281!3.72e-07!3;UBERON:0009664!3.72e-07!3;UBERON:0002296!3.72e-07!3;UBERON:0005602!3.72e-07!3;UBERON:0001179!3.72e-07!3;UBERON:0006293!3.72e-07!3;UBERON:0000200!3.92e-07!6;UBERON:0000481!6.12e-07!347;UBERON:0004921!7.26e-07!129;UBERON:0004185!7.26e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.70e-40;4!UBERON:0000160;1.03e-30;17!UBERON:0005409;4.07e-24;22!UBERON:0004921;9.90e-15;33!UBERON:0001155;1.12e-10;9!UBERON:0000059;6.61e-09;11!UBERON:0002114;1.04e-08;2!UBERON:0000922;7.79e-08;49!UBERON:0001555;5.17e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.70e-40,4;UBERON:0000160,9.67e-31,17;UBERON:0005409,2.17e-21,25;UBERON:0001155,1.07e-10,9;UBERON:0000059,6.35e-09,11;UBERON:0002114,1.04e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,13.0229185293946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59223616106011,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.0824158583811665,0.337017719270924,0,0,0,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0.315222829196793,2.30800187793992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0.0657727735628491,0,0,0.627944742804112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.40219106755613,17.0476457193087,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0,4.2322147241232,0,0,0,0,0,0,0,0,0,0,0.454672189309436,1.33982065078089,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,13.0229185293946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59223616106011,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.0824158583811665,0.337017719270924,0,0,0,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0.315222829196793,2.30800187793992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0.0657727735628491,0,0,0.627944742804112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.40219106755613,17.0476457193087,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0,4.2322147241232,0,0,0,0,0,0,0,0,0,0,0.454672189309436,1.33982065078089,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@SLC39A4 | |short_description=p7@SLC39A4 | ||
}} | }} |
Latest revision as of 01:51, 17 September 2015
Short description: | p7@SLC39A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC39A4_5end |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | 253bp_to_uc003zco.2_5end |
EntrezGene: | SLC39A4 |
HGNC: | 17129 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.70e-40 | 4 |
intestine | 9.67e-31 | 17 |
gastrointestinal system | 2.17e-21 | 25 |
colon | 1.07e-10 | 9 |
large intestine | 6.35e-09 | 11 |
duodenum | 1.04e-08 | 2 |