FFCP PHASE1:Hg19::chr6:1626414..1626429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2762 | |EntrezGene=2762 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4369 | |HGNC=4369 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000486793_5end | |association_with_transcript=0bp_to_ENST00000486793_5end | ||
|cluster_id=chr6:1626414..1626429,- | |||
|coexpression_cluster_id=C4581 | |||
|description=CAGE_peak_7_at_GMDS_5end | |description=CAGE_peak_7_at_GMDS_5end | ||
|id=chr6:1626414..1626429,- | |id=chr6:1626414..1626429,- | ||
|ontology_enrichment_celltype=CL:0000327!1.21e-13!14;CL:0000153!9.19e-13!9;CL:0000447!9.19e-13!9;CL:0000499!7.70e-10!27;CL:0000667!2.16e-08!6;CL:0000058!2.16e-08!6;CL:0000138!2.16e-08!6 | |ontology_enrichment_celltype=CL:0000327!1.21e-13!14;CL:0000153!9.19e-13!9;CL:0000447!9.19e-13!9;CL:0000499!7.70e-10!27;CL:0000667!2.16e-08!6;CL:0000058!2.16e-08!6;CL:0000138!2.16e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000153;9.94e-24;9!CL:0000447;9.94e-24;9!CL:0000138;2.83e-19;6!CL:0000327;7.57e-18;15!CL:0002564;4.91e-14;3!CL:0000499;5.42e-14;28!CL:0002602;5.74e-10;2!CL:0002540;3.26e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.20e-23,9;CL:0000447,1.20e-23,9;CL:0000058,2.49e-19,6;CL:0000138,2.49e-19,6;CL:0000327,7.50e-18,15;CL:0000499,5.12e-14,28;CL:0002564,6.71e-14,3;CL:0002602,5.50e-10,2;CL:0002540,2.72e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006965;6.01e-10;2!UBERON:0006241;9.60e-07;3!UBERON:0003057;9.60e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-19!115;UBERON:0000477!3.55e-11!286;UBERON:0004905!2.38e-09!5;UBERON:0000982!2.38e-09!5;UBERON:0004770!2.38e-09!5;UBERON:0000153!6.70e-09!129;UBERON:0007811!6.70e-09!129;UBERON:0003103!6.90e-09!69;UBERON:0003075!7.10e-08!86;UBERON:0007284!7.10e-08!86;UBERON:0005743!7.68e-08!86;UBERON:0001017!1.07e-07!82;UBERON:0000119!1.17e-07!312;UBERON:0002346!3.23e-07!90;UBERON:0002616!4.13e-07!59;UBERON:0000033!4.38e-07!123;UBERON:0004111!7.27e-07!241;UBERON:0003296!9.76e-07!4;UBERON:0010133!9.76e-07!4 | |ontology_enrichment_uberon=UBERON:0007023!1.56e-19!115;UBERON:0000477!3.55e-11!286;UBERON:0004905!2.38e-09!5;UBERON:0000982!2.38e-09!5;UBERON:0004770!2.38e-09!5;UBERON:0000153!6.70e-09!129;UBERON:0007811!6.70e-09!129;UBERON:0003103!6.90e-09!69;UBERON:0003075!7.10e-08!86;UBERON:0007284!7.10e-08!86;UBERON:0005743!7.68e-08!86;UBERON:0001017!1.07e-07!82;UBERON:0000119!1.17e-07!312;UBERON:0002346!3.23e-07!90;UBERON:0002616!4.13e-07!59;UBERON:0000033!4.38e-07!123;UBERON:0004111!7.27e-07!241;UBERON:0003296!9.76e-07!4;UBERON:0010133!9.76e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;5.10e-26;8!UBERON:0000982;5.10e-26;8!UBERON:0004770;5.10e-26;8!UBERON:0011135;2.96e-22;5!UBERON:0002216;2.96e-22;5!UBERON:0011134;2.96e-22;5!UBERON:0002209;2.96e-22;5!UBERON:0002213;2.96e-22;5!UBERON:0007844;2.96e-22;5!UBERON:0011138;2.96e-22;5!UBERON:0001130;2.96e-22;5!UBERON:0001066;2.96e-22;5!UBERON:0001468;2.96e-22;5!UBERON:0002242;4.91e-14;3!UBERON:0001829;1.40e-10;2!UBERON:0002360;4.19e-10;2!UBERON:0000094;4.19e-10;2!UBERON:0010743;4.19e-10;2!UBERON:0006444;5.74e-10;2!UBERON:0001995;5.74e-10;2!UBERON:0004715;5.74e-10;2!UBERON:0004765;1.01e-09;26!UBERON:0000341;2.35e-09;2!UBERON:0001044;9.45e-08;6!UBERON:0003293;9.45e-08;6!UBERON:0003294;9.45e-08;6!UBERON:0010047;9.45e-08;6!UBERON:0003408;9.45e-08;6!UBERON:0000167;9.45e-08;6!UBERON:0001434;1.71e-07;36!UBERON:0002418;6.56e-07;3!UBERON:0004755;6.56e-07;3!UBERON:0000075;9.21e-07;16!UBERON:0002240;9.60e-07;3!UBERON:0005174;9.60e-07;3!UBERON:0001137;9.60e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,9.05e-26,8;UBERON:0000982,9.05e-26,8;UBERON:0004770,9.05e-26,8;UBERON:0011135,3.88e-22,5;UBERON:0002216,3.88e-22,5;UBERON:0011134,3.88e-22,5;UBERON:0002209,3.88e-22,5;UBERON:0002213,3.88e-22,5;UBERON:0005856,3.88e-22,5;UBERON:0005866,3.88e-22,5;UBERON:0005863,3.88e-22,5;UBERON:0007844,3.88e-22,5;UBERON:0011138,3.88e-22,5;UBERON:0001130,3.88e-22,5;UBERON:0001066,3.88e-22,5;UBERON:0001468,3.88e-22,5;UBERON:0002242,6.71e-14,3;UBERON:0003068,6.71e-14,3;UBERON:0002328,6.71e-14,3;UBERON:0004880,6.71e-14,3;UBERON:0001829,1.40e-10,2;UBERON:0002360,4.39e-10,2;UBERON:0000094,4.39e-10,2;UBERON:0010743,4.39e-10,2;UBERON:0006444,5.50e-10,2;UBERON:0001995,5.50e-10,2;UBERON:0004715,5.50e-10,2;UBERON:0000341,1.74e-09,2;UBERON:0001044,9.46e-08,6;UBERON:0003293,9.46e-08,6;UBERON:0003294,9.46e-08,6;UBERON:0010047,9.46e-08,6;UBERON:0000167,9.46e-08,6;UBERON:0002418,6.37e-07,3;UBERON:0004755,6.37e-07,3;UBERON:0002240,8.55e-07,3;UBERON:0005174,8.55e-07,3;UBERON:0001137,8.55e-07,3;UBERON:0000075,9.95e-07,16 | |||
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|short_description=p7@GMDS | |short_description=p7@GMDS | ||
}} | }} |
Latest revision as of 17:37, 16 September 2015
Short description: | p7@GMDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GMDS_5end |
Coexpression cluster: | C4581_Chondrocyte_salivary_submaxillary_parotid_dura_aorta_retina |
Association with transcript: | 0bp_to_ENST00000486793_5end |
EntrezGene: | GMDS |
HGNC: | 4369 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.20e-23 | 9 |
carbohydrate secreting cell | 1.20e-23 | 9 |
chondroblast | 2.49e-19 | 6 |
chondrocyte | 2.49e-19 | 6 |
extracellular matrix secreting cell | 7.50e-18 | 15 |
stromal cell | 5.12e-14 | 28 |
nucleus pulposus cell of intervertebral disc | 6.71e-14 | 3 |
annulus pulposus cell | 5.50e-10 | 2 |
mesenchymal stem cell of the bone marrow | 2.72e-07 | 6 |