FFCP PHASE1:Hg19::chr16:28303782..28303797,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:28303782..28303797,+
|short_description=p3@SBK1
|description=CAGE_peak_3_at_SBK1_5end
|association_with_transcript=-42bp_to_ENST00000341901,NM_001024401,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=388228 | |EntrezGene=388228 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17699 | |HGNC=17699 | ||
|TSSclassifier=strong | |||
|UniProt=Q52WX2 | |UniProt=Q52WX2 | ||
|association_with_transcript=-42bp_to_ENST00000341901,NM_001024401,uc002dpd.2_5end | |||
|cluster_id=chr16:28303782..28303797,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_SBK1_5end | |||
|id=chr16:28303782..28303797,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.65e-09!8;CL:0002319!4.34e-09!25;CL:0000540!1.45e-07!6;CL:0000031!1.45e-07!6;CL:0000404!1.45e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.48e-15;6!CL:0000404;3.48e-15;6!CL:0002322;7.54e-12;5!CL:0002319;1.61e-07;25!CL:0002321;5.07e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.50e-20,8;CL:0000540,2.22e-15,6;CL:0000031,2.22e-15,6;CL:0000404,2.22e-15,6;CL:0002322,7.70e-12,5;CL:0002319,1.39e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;3.48e-15;6!UBERON:0006601;1.59e-11;82!UBERON:0006215;1.63e-08;3 | |||
|ontology_enrichment_disease=DOID:3095!6.16e-07!22;DOID:2994!6.16e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.70e-48!86;UBERON:0000073!7.56e-48!94;UBERON:0001016!7.56e-48!94;UBERON:0001017!2.17e-47!82;UBERON:0001049!3.38e-40!57;UBERON:0005068!3.38e-40!57;UBERON:0006241!3.38e-40!57;UBERON:0007135!3.38e-40!57;UBERON:0000955!1.78e-36!69;UBERON:0006238!1.78e-36!69;UBERON:0002346!1.29e-33!90;UBERON:0002616!2.98e-33!59;UBERON:0003075!4.24e-32!86;UBERON:0007284!4.24e-32!86;UBERON:0002780!1.11e-30!41;UBERON:0001890!1.11e-30!41;UBERON:0006240!1.11e-30!41;UBERON:0003080!1.37e-29!42;UBERON:0002020!2.44e-29!34;UBERON:0003528!2.44e-29!34;UBERON:0001893!4.22e-29!34;UBERON:0002791!4.58e-28!33;UBERON:0001869!5.95e-28!32;UBERON:0000924!4.31e-27!173;UBERON:0006601!4.31e-27!173;UBERON:0004121!1.15e-25!169;UBERON:0003056!3.94e-25!61;UBERON:0000153!2.40e-24!129;UBERON:0007811!2.40e-24!129;UBERON:0000956!7.10e-24!25;UBERON:0000203!7.10e-24!25;UBERON:0000033!6.08e-23!123;UBERON:0002619!2.79e-22!22;UBERON:0001950!1.27e-20!20;UBERON:0007023!1.31e-14!115;UBERON:0003076!1.66e-11!15;UBERON:0003057!1.66e-11!15;UBERON:0004733!1.24e-09!12;UBERON:0002028!1.24e-09!12;UBERON:0007277!1.24e-09!12;UBERON:0000025!4.41e-09!194;UBERON:0004732!1.29e-08!13;UBERON:0000064!2.38e-08!219;UBERON:0000200!1.44e-07!6;UBERON:0002680!1.72e-07!9;UBERON:0001895!1.72e-07!9;UBERON:0010092!1.72e-07!9;UBERON:0001871!2.39e-07!7;UBERON:0004111!2.72e-07!241;UBERON:0000483!2.89e-07!309;UBERON:0002420!3.69e-07!9;UBERON:0007245!3.69e-07!9;UBERON:0010009!3.69e-07!9;UBERON:0010011!3.69e-07!9;UBERON:0000454!3.69e-07!9;UBERON:0002308!5.24e-07!9;UBERON:0000125!5.24e-07!9;UBERON:0000119!5.77e-07!312;UBERON:0002021!7.99e-07!5;UBERON:0001872!8.54e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.96e-46;20!UBERON:0002619;5.10e-46;22!UBERON:0001869;3.27e-41;32!UBERON:0000956;5.78e-40;25!UBERON:0000203;5.78e-40;25!UBERON:0003528;1.67e-39;34!UBERON:0002020;1.67e-39;34!UBERON:0002791;3.28e-38;32!UBERON:0001893;7.11e-38;34!UBERON:0002780;1.97e-33;41!UBERON:0001890;1.97e-33;41!UBERON:0000073;2.16e-31;53!UBERON:0002616;2.16e-31;53!UBERON:0000955;1.33e-23;68!UBERON:0001017;7.01e-22;75!UBERON:0001016;6.27e-21;83!UBERON:0000200;6.00e-15;6!UBERON:0002021;7.20e-14;5!UBERON:0001872;1.44e-13;5!UBERON:0001871;4.28e-13;6!UBERON:0002680;9.58e-10;9!UBERON:0001895;9.58e-10;9!UBERON:0004733;1.44e-09;12!UBERON:0002028;1.44e-09;12!UBERON:0002420;2.86e-09;9!UBERON:0007245;2.86e-09;9!UBERON:0010009;2.86e-09;9!UBERON:0010011;2.86e-09;9!UBERON:0000454;2.86e-09;9!UBERON:0000125;6.27e-09;9!UBERON:0002308;6.27e-09;9!UBERON:0004732;9.61e-09;13!UBERON:0001870;1.55e-08;3!UBERON:0000349;2.21e-08;5!UBERON:0000988;3.41e-08;3!UBERON:0007023;2.32e-07;114!UBERON:0011216;3.57e-07;132!UBERON:0002298;6.17e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.07e-65,81;UBERON:0001016,4.08e-63,89;UBERON:0000073,1.47e-55,53;UBERON:0002616,1.47e-55,53;UBERON:0001049,4.05e-55,56;UBERON:0005068,4.05e-55,56;UBERON:0006241,4.05e-55,56;UBERON:0007135,4.05e-55,56;UBERON:0000955,2.74e-51,68;UBERON:0006238,2.74e-51,68;UBERON:0003528,2.34e-47,34;UBERON:0002020,2.34e-47,34;UBERON:0002780,3.38e-47,41;UBERON:0001890,3.38e-47,41;UBERON:0003080,3.38e-47,41;UBERON:0006240,3.38e-47,41;UBERON:0001869,4.92e-47,32;UBERON:0001950,2.27e-46,20;UBERON:0002619,3.46e-46,22;UBERON:0001893,6.87e-44,34;UBERON:0002791,3.66e-43,32;UBERON:0000956,4.11e-40,25;UBERON:0000203,4.11e-40,25;UBERON:0003075,1.89e-36,82;UBERON:0007284,1.89e-36,82;UBERON:0002346,2.46e-36,86;UBERON:0003056,2.70e-31,61;UBERON:0004121,8.18e-31,171;UBERON:0000924,8.18e-31,171;UBERON:0006601,8.18e-31,171;UBERON:0010371,6.72e-30,104;UBERON:0011216,1.37e-25,223;UBERON:0010314,2.31e-22,132;UBERON:0007023,1.27e-21,114;UBERON:0000200,2.17e-15,6;UBERON:0002021,1.10e-13,5;UBERON:0001872,1.28e-13,5;UBERON:0001871,2.48e-13,6;UBERON:0000025,9.14e-13,192;UBERON:0002680,7.42e-10,9;UBERON:0001895,7.42e-10,9;UBERON:0010092,7.42e-10,9;UBERON:0004733,1.20e-09,12;UBERON:0002028,1.20e-09,12;UBERON:0007277,1.20e-09,12;UBERON:0003076,1.21e-09,15;UBERON:0003057,1.21e-09,15;UBERON:0002420,2.23e-09,9;UBERON:0007245,2.23e-09,9;UBERON:0010009,2.23e-09,9;UBERON:0010011,2.23e-09,9;UBERON:0000454,2.23e-09,9;UBERON:0000125,4.19e-09,9;UBERON:0002308,4.19e-09,9;UBERON:0004732,8.18e-09,13;UBERON:0004111,1.01e-08,240;UBERON:0001870,1.20e-08,3;UBERON:0000349,1.77e-08,5;UBERON:0000988,2.49e-08,3;UBERON:0000483,4.26e-07,306;UBERON:0002298,5.29e-07,6;UBERON:0000119,6.37e-07,309 | |||
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| ||
|short_description=p3@SBK1 | |||
}} | }} |
Latest revision as of 23:42, 15 September 2015
Short description: | p3@SBK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SBK1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -42bp_to_ENST00000341901, NM_001024401, uc002dpd.2_5end |
EntrezGene: | SBK1 |
HGNC: | 17699 |
UniProt: | Q52WX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.50e-20 | 8 |
neuron | 2.22e-15 | 6 |
neuroblast | 2.22e-15 | 6 |
electrically signaling cell | 2.22e-15 | 6 |
embryonic stem cell | 7.70e-12 | 5 |
neural cell | 1.39e-07 | 25 |