FFCP PHASE1:Hg19::chr16:27225956..27225964,+: Difference between revisions
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|id=chr16:27225956..27225964,+
|short_description=p12@JMJD5
|description=CAGE_peak_12_at_JMJD5_5end
|association_with_transcript=23bp_to_uc010bxx.2_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79831 | |EntrezGene=79831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25840 | |HGNC=25840 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_uc010bxx.2_5end | |||
|cluster_id=chr16:27225956..27225964,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_12_at_JMJD5_5end | |||
|id=chr16:27225956..27225964,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.30e-14!12;CL:0000417!2.30e-14!12;CL:0000668!2.30e-14!12;CL:0000414!2.30e-14!12;CL:0000412!2.30e-14!12;CL:0000182!2.30e-14!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.71e-30;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.45e-30,12;CL:0000223,6.14e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000223;6.83e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!6.80e-25!26;UBERON:0002107!8.80e-16!19;UBERON:0006925!8.80e-16!19;UBERON:0008836!8.80e-16!19;UBERON:0008835!1.11e-13!22;UBERON:0003894!1.11e-13!22;UBERON:0009854!4.20e-13!23;UBERON:0002368!4.22e-13!35;UBERON:0007499!4.40e-12!25;UBERON:0009497!4.40e-12!25;UBERON:0000015!4.40e-12!25;UBERON:0002423!4.40e-12!25;UBERON:0006235!4.40e-12!25;UBERON:0004161!4.40e-12!25;UBERON:0009856!1.25e-11!26;UBERON:0004177!4.27e-11!7;UBERON:0004921!1.09e-10!129;UBERON:0004185!1.09e-10!129;UBERON:0000949!3.30e-10!45;UBERON:0002365!8.32e-10!31;UBERON:0002330!8.32e-10!31;UBERON:0001007!8.50e-09!155;UBERON:0001555!8.50e-09!155;UBERON:0007026!8.50e-09!155;UBERON:0003929!1.64e-08!54;UBERON:0005172!2.37e-08!55;UBERON:0005173!2.37e-08!55;UBERON:0005409!2.64e-08!35;UBERON:0004119!5.14e-08!169;UBERON:0000925!5.14e-08!169;UBERON:0006595!5.14e-08!169;UBERON:0002530!8.60e-08!59;UBERON:0002417!1.57e-07!61;UBERON:0000916!1.57e-07!61;UBERON:0002106!3.35e-07!3;UBERON:0004854!3.35e-07!3;UBERON:0009034!3.35e-07!3;UBERON:0002095!3.35e-07!3;UBERON:0004782!3.35e-07!3;UBERON:0003281!3.35e-07!3;UBERON:0009664!3.35e-07!3;UBERON:0002296!3.35e-07!3;UBERON:0005602!3.35e-07!3;UBERON:0001179!3.35e-07!3;UBERON:0006293!3.35e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.67e-34;19!UBERON:0006925;7.67e-34;19!UBERON:0002423;6.14e-26;25!UBERON:0002365;9.28e-22;31!UBERON:0002330;9.28e-22;31!UBERON:0002368;1.73e-17;33!UBERON:0000949;1.18e-14;43!UBERON:0002114;1.83e-14;2!UBERON:0005172;9.07e-11;52!UBERON:0005173;9.07e-11;52!UBERON:0001007;1.38e-09;81!UBERON:0002108;3.22e-09;4!UBERON:0002530;4.43e-08;57!UBERON:0002417;2.07e-07;58!UBERON:0000916;2.07e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.04e-34,19;UBERON:0006925,7.04e-34,19;UBERON:0008836,7.04e-34,19;UBERON:0008835,2.19e-29,22;UBERON:0003894,2.19e-29,22;UBERON:0009854,3.80e-28,23;UBERON:0007499,5.75e-26,25;UBERON:0009497,5.75e-26,25;UBERON:0000015,5.75e-26,25;UBERON:0002423,5.75e-26,25;UBERON:0006235,5.75e-26,25;UBERON:0004161,5.75e-26,25;UBERON:0009856,5.31e-25,26;UBERON:0002365,4.17e-21,31;UBERON:0002330,4.17e-21,31;UBERON:0002368,8.68e-19,35;UBERON:0000949,8.74e-15,45;UBERON:0002114,2.09e-14,2;UBERON:0003929,1.93e-12,54;UBERON:0005172,1.93e-12,54;UBERON:0005173,1.93e-12,54;UBERON:0002530,1.91e-11,59;UBERON:0002417,2.88e-11,60;UBERON:0000916,2.88e-11,60;UBERON:0002108,3.49e-09,4;UBERON:0004921,6.01e-09,118;UBERON:0005911,2.05e-08,82;UBERON:0001041,5.76e-08,87;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0005177,6.11e-07,101;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p12@JMJD5 | |||
}} | }} |
Latest revision as of 21:08, 15 September 2015
Short description: | p12@JMJD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_JMJD5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 23bp_to_uc010bxx.2_5end |
EntrezGene: | JMJD5 |
HGNC: | 25840 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.45e-30 | 12 |
endodermal cell | 6.14e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 7.04e-34 | 19 |
digestive gland | 7.04e-34 | 19 |
liver bud | 7.04e-34 | 19 |
hepatic diverticulum | 2.19e-29 | 22 |
liver primordium | 2.19e-29 | 22 |
digestive tract diverticulum | 3.80e-28 | 23 |
epithelial sac | 5.75e-26 | 25 |
epithelium of foregut-midgut junction | 5.75e-26 | 25 |
anatomical boundary | 5.75e-26 | 25 |
hepatobiliary system | 5.75e-26 | 25 |
foregut-midgut junction | 5.75e-26 | 25 |
septum transversum | 5.75e-26 | 25 |
sac | 5.31e-25 | 26 |
exocrine gland | 4.17e-21 | 31 |
exocrine system | 4.17e-21 | 31 |
endocrine gland | 8.68e-19 | 35 |
endocrine system | 8.74e-15 | 45 |
duodenum | 2.09e-14 | 2 |
gut epithelium | 1.93e-12 | 54 |
abdomen element | 1.93e-12 | 54 |
abdominal segment element | 1.93e-12 | 54 |
gland | 1.91e-11 | 59 |
abdominal segment of trunk | 2.88e-11 | 60 |
abdomen | 2.88e-11 | 60 |
small intestine | 3.49e-09 | 4 |
subdivision of digestive tract | 6.01e-09 | 118 |
endo-epithelium | 2.05e-08 | 82 |
foregut | 5.76e-08 | 87 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
trunk region element | 6.11e-07 | 101 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |