FFCP PHASE1:Hg19::chr16:23766308..23766323,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:23766308..23766323,+
|short_description=p2@CHP2
|description=CAGE_peak_2_at_CHP2_5end
|association_with_transcript=360bp_to_ENST00000300113,NM_022097,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=63928 | |EntrezGene=63928 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=O43745,A8K2I8 | |UniProt=O43745,A8K2I8 | ||
|association_with_transcript=360bp_to_ENST00000300113,NM_022097,uc002dmb.1_5end | |||
|cluster_id=chr16:23766308..23766323,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_2_at_CHP2_5end | |||
|id=chr16:23766308..23766323,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002623;3.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.57e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.15e-20!57;UBERON:0005068!4.15e-20!57;UBERON:0006241!4.15e-20!57;UBERON:0007135!4.15e-20!57;UBERON:0007023!7.19e-20!115;UBERON:0002616!8.65e-17!59;UBERON:0002298!1.10e-16!8;UBERON:0000955!1.05e-13!69;UBERON:0006238!1.05e-13!69;UBERON:0002780!2.64e-13!41;UBERON:0001890!2.64e-13!41;UBERON:0006240!2.64e-13!41;UBERON:0000059!5.76e-13!11;UBERON:0003080!6.00e-13!42;UBERON:0001017!7.76e-13!82;UBERON:0003075!2.80e-12!86;UBERON:0007284!2.80e-12!86;UBERON:0005743!4.22e-12!86;UBERON:0000160!5.06e-12!27;UBERON:0002346!1.36e-11!90;UBERON:0002791!3.07e-11!33;UBERON:0001893!7.09e-11!34;UBERON:0002020!7.27e-11!34;UBERON:0003528!7.27e-11!34;UBERON:0000073!1.14e-10!94;UBERON:0001016!1.14e-10!94;UBERON:0001155!1.75e-10!9;UBERON:0005409!4.57e-09!35;UBERON:0003076!9.09e-09!15;UBERON:0003057!9.09e-09!15;UBERON:0001950!1.26e-08!20;UBERON:0003056!2.33e-08!61;UBERON:0001896!3.29e-08!3;UBERON:0005290!3.29e-08!3;UBERON:0010096!3.29e-08!3;UBERON:0006331!3.80e-08!3;UBERON:0000988!6.74e-08!3;UBERON:0002619!7.90e-08!22;UBERON:0000033!1.43e-07!123;UBERON:0004733!2.82e-07!12;UBERON:0002028!2.82e-07!12;UBERON:0007277!2.82e-07!12;UBERON:0000153!4.42e-07!129;UBERON:0007811!4.42e-07!129;UBERON:0001869!4.63e-07!32;UBERON:0001154!4.69e-07!1;UBERON:0001153!4.69e-07!1;UBERON:0002038!5.89e-07!1;UBERON:0009661!5.89e-07!1;UBERON:0000956!7.35e-07!25;UBERON:0000203!7.35e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.87e-63;17!UBERON:0005409;1.24e-49;22!UBERON:0000059;7.55e-41;11!UBERON:0004921;5.00e-39;33!UBERON:0002108;2.23e-33;4!UBERON:0001155;2.32e-32;9!UBERON:0001154;3.57e-19;1!UBERON:0001153;3.57e-19;1!UBERON:0009854;3.57e-19;1!UBERON:0001555;3.02e-17;54!UBERON:0004907;2.90e-15;5!UBERON:0001007;5.09e-10;81!UBERON:0002114;2.63e-07;2!UBERON:0000922;6.73e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.87e-63,17;UBERON:0005409,6.94e-44,25;UBERON:0000059,7.55e-41,11;UBERON:0002108,2.23e-33,4;UBERON:0001155,2.42e-32,9;UBERON:0001154,3.91e-19,1;UBERON:0001153,3.91e-19,1;UBERON:0001045,3.91e-19,1;UBERON:0004907,2.90e-15,5;UBERON:0004921,9.84e-12,118;UBERON:0001007,1.91e-09,145;UBERON:0001555,1.91e-09,145;UBERON:0007026,1.91e-09,145;UBERON:0004119,1.67e-08,160;UBERON:0000925,1.67e-08,160;UBERON:0006595,1.67e-08,160;UBERON:0002114,2.63e-07,2;UBERON:0011216,2.76e-07,223 | |||
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|short_description=p2@CHP2 | |||
}} | }} |
Latest revision as of 06:30, 25 September 2015
Short description: | p2@CHP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHP2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 360bp_to_ENST00000300113, NM_022097, uc002dmb.1_5end |
EntrezGene: | CHP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.87e-63 | 17 |
gastrointestinal system | 6.94e-44 | 25 |
large intestine | 7.55e-41 | 11 |
small intestine | 2.23e-33 | 4 |
colon | 2.42e-32 | 9 |
vermiform appendix | 3.91e-19 | 1 |
caecum | 3.91e-19 | 1 |
midgut | 3.91e-19 | 1 |
lower digestive tract | 2.90e-15 | 5 |
subdivision of digestive tract | 9.84e-12 | 118 |
digestive system | 1.91e-09 | 145 |
digestive tract | 1.91e-09 | 145 |
primitive gut | 1.91e-09 | 145 |
endoderm-derived structure | 1.67e-08 | 160 |
endoderm | 1.67e-08 | 160 |
presumptive endoderm | 1.67e-08 | 160 |
duodenum | 2.63e-07 | 2 |
organ system subdivision | 2.76e-07 | 223 |