FFCP PHASE1:Hg19::chr3:87039621..87039638,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:87039621..87039638,- | |||
|coexpression_cluster_id=C461 | |||
|description=CAGE_peak_at_chr3:87039621..87039638,- | |description=CAGE_peak_at_chr3:87039621..87039638,- | ||
|id=chr3:87039621..87039638,- | |id=chr3:87039621..87039638,- | ||
|ontology_enrichment_celltype=CL:0002620!7.12e-12!23;CL:0000057!2.16e-09!75;CL:0000055!8.49e-09!180;CL:0000188!8.32e-08!9 | |ontology_enrichment_celltype=CL:0002620!7.12e-12!23;CL:0000057!2.16e-09!75;CL:0000055!8.49e-09!180;CL:0000188!8.32e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002541;7.53e-34;3!CL:0000349;1.40e-14;19!CL:0002537;6.95e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.06e-33,3;CL:0000349,1.38e-14,19;CL:0002537,5.95e-10,5 | |||
|ontology_enrichment_development_v019=UBERON:0008814;4.55e-07;2!UBERON:0010056;4.55e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;2.46e-12;1!DOID:4549;2.46e-12;1!DOID:5861;2.46e-12;1!DOID:6496;2.46e-12;1!DOID:3112;2.46e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.40e-12,1;DOID:4549,1.40e-12,1;DOID:5861,1.40e-12,1;DOID:6496,1.40e-12,1;DOID:3112,3.08e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!6.46e-08!14;UBERON:0000158!6.46e-08!14 | |ontology_enrichment_uberon=UBERON:0005631!6.46e-08!14;UBERON:0000158!6.46e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.53e-34;3!UBERON:0000920;7.53e-34;3!UBERON:0005631;1.07e-27;10!UBERON:0000158;1.07e-27;10!UBERON:0000478;1.57e-11;24!UBERON:0000305;2.64e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.06e-33,3;UBERON:0005631,8.38e-20,14;UBERON:0000158,8.38e-20,14;UBERON:0003124,7.73e-15,7;UBERON:0000478,1.55e-11,24;UBERON:0004923,1.31e-07,66;UBERON:0000305,2.37e-07,7 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.790513071238134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,0.794455084879313,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,0,0.298897361103602,0.352303495931295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0.211931901159562,0.600182192168805,0.309157587715317,0.515281080091258,0.18611685633159,1.35021065793013,0.0974370051611986,1.26216887122057,0.368199594569197,0,0.710019185033229,0.10075209822764,0.169560592310488,0.386521706326594,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0,0.237270619111097,0.539325232640658,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0.845302752556,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.434343920002738,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.606255142892519,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.308419387605311,0,0.0821271560138091,0,0,0.483437798366489,0,0.368323955743585,0,0.182091168006717,0,0,1.61732207919271,0,0,0.422206515571503,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.255679882248303,0.267096106940212,0.330569830721956,0.192190067365106,0,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.67121139316383,0.296964680832639,2.45728561679386,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,1.5950057986596,1.09917112082235,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.391969589657511,0.783532859223623,0,0,0.290268993867255,0.511625219603299,0.328461828212837,0,1.76512253383001,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.761610424337591,0,0,0,0,0,0,1.03018711554838,0,0,0,0,0.260994291965212,0,0,0.97894681802587,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5311722192247,0.762764190934334,0,0,0.300841313397029,0,0,0,1.31017534008077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0.0657727735628491,0,0,0,0,0.840816489941367,0,0,0,0,0,0,0,0,0,0.17071847709395,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.237840181555137,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,7.05789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.790513071238134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,0.794455084879313,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,0,0.298897361103602,0.352303495931295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0.211931901159562,0.600182192168805,0.309157587715317,0.515281080091258,0.18611685633159,1.35021065793013,0.0974370051611986,1.26216887122057,0.368199594569197,0,0.710019185033229,0.10075209822764,0.169560592310488,0.386521706326594,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0,0.237270619111097,0.539325232640658,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0.845302752556,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.434343920002738,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.606255142892519,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.308419387605311,0,0.0821271560138091,0,0,0.483437798366489,0,0.368323955743585,0,0.182091168006717,0,0,1.61732207919271,0,0,0.422206515571503,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.255679882248303,0.267096106940212,0.330569830721956,0.192190067365106,0,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.67121139316383,0.296964680832639,2.45728561679386,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,1.5950057986596,1.09917112082235,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.391969589657511,0.783532859223623,0,0,0.290268993867255,0.511625219603299,0.328461828212837,0,1.76512253383001,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.761610424337591,0,0,0,0,0,0,1.03018711554838,0,0,0,0,0.260994291965212,0,0,0.97894681802587,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5311722192247,0.762764190934334,0,0,0.300841313397029,0,0,0,1.31017534008077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0.0657727735628491,0,0,0,0,0.840816489941367,0,0,0,0,0,0,0,0,0,0.17071847709395,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.237840181555137,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,7.05789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr3:87039621..87039638,- | |short_description=p@chr3:87039621..87039638,- | ||
}} | }} |
Latest revision as of 23:48, 29 July 2015
Short description: | p@chr3:87039621..87039638, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:87039621..87039638, - |
Coexpression cluster: | C461_oral_chorionic_squamous_amniotic_epidermoid_gall_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.06e-33 | 3 |
extraembryonic cell | 1.38e-14 | 19 |
amnion mesenchymal stem cell | 5.95e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.06e-33 | 3 |
extraembryonic membrane | 8.38e-20 | 14 |
membranous layer | 8.38e-20 | 14 |
chorion | 7.73e-15 | 7 |
extraembryonic structure | 1.55e-11 | 24 |
organ component layer | 1.31e-07 | 66 |
amnion | 2.37e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.40e-12 | 1 |
extraosseous chondrosarcoma | 1.40e-12 | 1 |
myxoid chondrosarcoma | 1.40e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 1.40e-12 | 1 |
papillary adenocarcinoma | 3.08e-12 | 1 |