FFCP PHASE1:Hg19::chr6:30131287..30131298,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89870 | |EntrezGene=89870 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16284 | |HGNC=16284 | ||
|TSSclassifier=strong | |||
|UniProt=A6NL11 | |UniProt=A6NL11 | ||
|association_with_transcript=-163bp_to_ENST00000376688_5end | |association_with_transcript=-163bp_to_ENST00000376688_5end | ||
|cluster_id=chr6:30131287..30131298,+ | |||
|description=CAGE_peak_2_at_TRIM15_5end | |description=CAGE_peak_2_at_TRIM15_5end | ||
|id=chr6:30131287..30131298,+ | |id=chr6:30131287..30131298,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.06e-18!12;CL:0000417!5.06e-18!12;CL:0000668!5.06e-18!12;CL:0000414!5.06e-18!12;CL:0000412!5.06e-18!12;CL:0000182!5.06e-18!12;CL:0000223!5.92e-14!59;CL:0002178!6.36e-07!3 | |ontology_enrichment_celltype=CL:0000181!5.06e-18!12;CL:0000417!5.06e-18!12;CL:0000668!5.06e-18!12;CL:0000414!5.06e-18!12;CL:0000412!5.06e-18!12;CL:0000182!5.06e-18!12;CL:0000223!5.92e-14!59;CL:0002178!6.36e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.16e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.22e-17,12;CL:0000223,6.61e-10,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.67e-18;11!UBERON:0009497;1.55e-15;13!UBERON:0003104;6.19e-10;31!CL:0000223;4.77e-08;58!UBERON:0001041;7.34e-07;30!UBERON:0006595;8.09e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.02e-10!106;DOID:299!3.31e-10!25;DOID:4929!9.97e-10!2;DOID:3119!7.94e-08!14;DOID:0050687!6.84e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000160;2.73e-43;17!UBERON:0005409;1.34e-42;22!UBERON:0004921;1.16e-23;33!UBERON:0002108;2.66e-23;4!UBERON:0000059;2.67e-18;11!UBERON:0002107;2.36e-16;19!UBERON:0006925;2.36e-16;19!UBERON:0001155;4.79e-13;9!UBERON:0002423;1.99e-12;25!UBERON:0001007;2.34e-12;81!UBERON:0002365;1.16e-09;31!UBERON:0002330;1.16e-09;31!UBERON:0001555;1.62e-08;54!UBERON:0002368;5.11e-08;33 | |||
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|short_description=p2@TRIM15 | |short_description=p2@TRIM15 | ||
}} | }} |
Latest revision as of 15:55, 17 September 2015
Short description: | p2@TRIM15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIM15_5end |
Coexpression cluster: | NA |
Association with transcript: | -163bp_to_ENST00000376688_5end |
EntrezGene: | TRIM15 |
HGNC: | 16284 |
UniProt: | A6NL11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.22e-17 | 12 |
endodermal cell | 6.61e-10 | 58 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.02e-43 | 17 |
gastrointestinal system | 1.31e-37 | 25 |
small intestine | 2.77e-23 | 4 |
subdivision of digestive tract | 9.15e-22 | 118 |
large intestine | 2.09e-18 | 11 |
digestive system | 1.99e-17 | 145 |
digestive tract | 1.99e-17 | 145 |
primitive gut | 1.99e-17 | 145 |
liver | 2.32e-16 | 19 |
digestive gland | 2.32e-16 | 19 |
liver bud | 2.32e-16 | 19 |
endoderm-derived structure | 1.21e-15 | 160 |
endoderm | 1.21e-15 | 160 |
presumptive endoderm | 1.21e-15 | 160 |
hepatic diverticulum | 3.95e-14 | 22 |
liver primordium | 3.95e-14 | 22 |
digestive tract diverticulum | 1.63e-13 | 23 |
colon | 4.23e-13 | 9 |
epithelial sac | 1.97e-12 | 25 |
epithelium of foregut-midgut junction | 1.97e-12 | 25 |
anatomical boundary | 1.97e-12 | 25 |
hepatobiliary system | 1.97e-12 | 25 |
foregut-midgut junction | 1.97e-12 | 25 |
septum transversum | 1.97e-12 | 25 |
organ system subdivision | 2.82e-12 | 223 |
sac | 5.95e-12 | 26 |
gut epithelium | 1.09e-10 | 54 |
exocrine gland | 5.14e-10 | 31 |
exocrine system | 5.14e-10 | 31 |
endocrine gland | 7.33e-09 | 35 |
gland | 2.96e-07 | 59 |
endocrine system | 7.21e-07 | 45 |
endo-epithelium | 7.87e-07 | 82 |