FFCP PHASE1:Hg19::chr6:134210625..134210636,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6943 | |EntrezGene=6943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11632 | |HGNC=11632 | ||
|TSSclassifier=strong | |||
|UniProt=O43680 | |UniProt=O43680 | ||
|association_with_transcript=89bp_to_BT019660,CR450293_5end | |association_with_transcript=89bp_to_BT019660,CR450293_5end | ||
|cluster_id=chr6:134210625..134210636,+ | |||
|description=CAGE_peak_6_at_TCF21_5end | |description=CAGE_peak_6_at_TCF21_5end | ||
|id=chr6:134210625..134210636,+ | |id=chr6:134210625..134210636,+ | ||
|ontology_enrichment_celltype=CL:0002615!3.73e-13!3;CL:0002504!8.96e-13!3;CL:1000279!8.96e-13!3;CL:1000280!8.96e-13!3;CL:0000192!4.81e-11!42;CL:0000514!4.81e-11!42;CL:0000187!1.49e-09!54;CL:0000680!6.68e-09!57;CL:0000056!6.68e-09!57;CL:0000355!6.68e-09!57;CL:1000487!8.19e-09!2;CL:0000183!1.66e-08!59;CL:0000393!2.57e-08!60;CL:0000211!2.57e-08!60 | |ontology_enrichment_celltype=CL:0002615!3.73e-13!3;CL:0002504!8.96e-13!3;CL:1000279!8.96e-13!3;CL:1000280!8.96e-13!3;CL:0000192!4.81e-11!42;CL:0000514!4.81e-11!42;CL:0000187!1.49e-09!54;CL:0000680!6.68e-09!57;CL:0000056!6.68e-09!57;CL:0000355!6.68e-09!57;CL:1000487!8.19e-09!2;CL:0000183!1.66e-08!59;CL:0000393!2.57e-08!60;CL:0000211!2.57e-08!60 | ||
|ontology_enrichment_celltype_v019=CL:0002504;3.11e-27;3!CL:1000279;3.11e-27;3!CL:0002615;3.11e-27;3!CL:1000280;3.11e-27;3!CL:0002599;4.66e-21;1!CL:1000487;3.18e-11;2!CL:0000192;2.98e-08;43!CL:0000136;4.95e-07;13!CL:0000187;6.94e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,3.56e-27,3;CL:0002504,4.07e-27,3;CL:1000279,4.07e-27,3;CL:1000280,4.07e-27,3;CL:0002599,2.30e-21,1;CL:0000192,1.22e-11,43;CL:0000514,1.22e-11,43;CL:1000487,3.70e-11,2;CL:0000187,4.00e-09,55;CL:0000680,1.18e-08,58;CL:0000056,1.18e-08,58;CL:0000355,1.18e-08,58;CL:0000393,3.11e-08,61;CL:0000211,3.11e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.98e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.82e-11,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003688;3.71e-14;6!UBERON:0002358;3.71e-14;6!UBERON:0003684;3.71e-14;6!UBERON:0001178;3.71e-14;6!UBERON:0001135;1.61e-12;15!UBERON:0001155;9.23e-10;9!UBERON:0004457;9.23e-10;9!UBERON:0000042;9.23e-10;9!UBERON:0000059;3.76e-08;11!UBERON:0001043;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.97e-14,6;UBERON:0002358,3.97e-14,6;UBERON:0003684,3.97e-14,6;UBERON:0001178,3.97e-14,6;UBERON:0001135,1.65e-12,15;UBERON:0001155,1.01e-09,9;UBERON:0000059,4.04e-08,11;UBERON:0001134,4.21e-08,62;UBERON:0002036,4.21e-08,62;UBERON:0003082,4.21e-08,62;UBERON:0001043,5.18e-08,3;UBERON:0009143,5.18e-08,3;UBERON:0002385,7.52e-08,64;UBERON:0001015,7.52e-08,64;UBERON:0000383,7.52e-08,64;UBERON:0004457,1.57e-07,12;UBERON:0000042,1.57e-07,12;UBERON:0002329,4.43e-07,71;UBERON:0003059,4.43e-07,71;UBERON:0007282,4.43e-07,71;UBERON:0004290,4.43e-07,71;UBERON:0009618,4.43e-07,71;UBERON:0003077,5.55e-07,72;UBERON:0007285,5.55e-07,72;UBERON:0007524,6.91e-07,73 | |||
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| ||
|short_description=p6@TCF21 | |short_description=p6@TCF21 | ||
}} | }} |
Latest revision as of 20:54, 24 September 2015
Short description: | p6@TCF21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TCF21_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_BT019660, CR450293_5end |
EntrezGene: | TCF21 |
HGNC: | 11632 |
UniProt: | O43680 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 3.56e-27 | 3 |
enteric smooth muscle cell | 4.07e-27 | 3 |
smooth muscle cell of large intestine | 4.07e-27 | 3 |
smooth muscle cell of colon | 4.07e-27 | 3 |
smooth muscle cell of the esophagus | 2.30e-21 | 1 |
smooth muscle cell | 1.22e-11 | 43 |
smooth muscle myoblast | 1.22e-11 | 43 |
smooth muscle cell of prostate | 3.70e-11 | 2 |
muscle cell | 4.00e-09 | 55 |
muscle precursor cell | 1.18e-08 | 58 |
myoblast | 1.18e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.18e-08 | 58 |
electrically responsive cell | 3.11e-08 | 61 |
electrically active cell | 3.11e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.97e-14 | 6 |
peritoneum | 3.97e-14 | 6 |
abdominal cavity | 3.97e-14 | 6 |
visceral peritoneum | 3.97e-14 | 6 |
smooth muscle tissue | 1.65e-12 | 15 |
colon | 1.01e-09 | 9 |
large intestine | 4.04e-08 | 11 |
skeletal muscle tissue | 4.21e-08 | 62 |
striated muscle tissue | 4.21e-08 | 62 |
myotome | 4.21e-08 | 62 |
esophagus | 5.18e-08 | 3 |
esophageal region | 5.18e-08 | 3 |
muscle tissue | 7.52e-08 | 64 |
musculature | 7.52e-08 | 64 |
musculature of body | 7.52e-08 | 64 |
cavity lining | 1.57e-07 | 12 |
serous membrane | 1.57e-07 | 12 |
somite | 4.43e-07 | 71 |
presomitic mesoderm | 4.43e-07 | 71 |
presumptive segmental plate | 4.43e-07 | 71 |
dermomyotome | 4.43e-07 | 71 |
trunk paraxial mesoderm | 4.43e-07 | 71 |
paraxial mesoderm | 5.55e-07 | 72 |
presumptive paraxial mesoderm | 5.55e-07 | 72 |
dense mesenchyme tissue | 6.91e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.82e-11 | 2 |