FFCP PHASE1:Hg19::chr6:111888323..111888337,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10758 | |EntrezGene=10758 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1343 | |HGNC=1343 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000368734_5end | |association_with_transcript=0bp_to_ENST00000368734_5end | ||
|cluster_id=chr6:111888323..111888337,- | |||
|description=CAGE_peak_16_at_TRAF3IP2_5end | |description=CAGE_peak_16_at_TRAF3IP2_5end | ||
|id=chr6:111888323..111888337,- | |id=chr6:111888323..111888337,- | ||
|ontology_enrichment_celltype=CL:0000115!2.22e-17!35;CL:0002078!2.01e-12!44;CL:0002139!4.82e-10!24;CL:0000213!3.74e-08!57;CL:0000215!3.74e-08!57;CL:0000071!5.18e-07!18;CL:0002546!5.18e-07!18 | |ontology_enrichment_celltype=CL:0000115!2.22e-17!35;CL:0002078!2.01e-12!44;CL:0002139!4.82e-10!24;CL:0000213!3.74e-08!57;CL:0000215!3.74e-08!57;CL:0000071!5.18e-07!18;CL:0002546!5.18e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000817;5.56e-16;1!CL:0002188;2.99e-12;5!CL:0000097;2.99e-12;5!CL:1000746;5.15e-09;7!CL:1000612;5.15e-09;7!CL:0000115;2.21e-08;36!CL:0002367;2.23e-08;2!CL:0000163;3.34e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,2.99e-12,5;CL:0000097,2.99e-12,5;CL:0002028,2.99e-12,5;CL:0000115,8.34e-10,36;CL:1000746,5.16e-09,7;CL:1000612,5.16e-09,7;CL:0002367,1.61e-08,2;CL:0002078,7.79e-08,45;CL:0000163,3.34e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1240;4.25e-08;39!DOID:2531;2.89e-07;51!DOID:0060083;2.89e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.60e-10,51;DOID:0060083,6.60e-10,51;DOID:1240,3.18e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.03e-14!90;UBERON:0001049!1.57e-14!57;UBERON:0005068!1.57e-14!57;UBERON:0006241!1.57e-14!57;UBERON:0007135!1.57e-14!57;UBERON:0003056!9.70e-14!61;UBERON:0001893!1.32e-13!34;UBERON:0001869!1.96e-13!32;UBERON:0002780!4.93e-13!41;UBERON:0001890!4.93e-13!41;UBERON:0006240!4.93e-13!41;UBERON:0003075!6.92e-13!86;UBERON:0007284!6.92e-13!86;UBERON:0002791!7.25e-13!33;UBERON:0000073!9.00e-13!94;UBERON:0001016!9.00e-13!94;UBERON:0003080!1.41e-12!42;UBERON:0002020!2.07e-12!34;UBERON:0003528!2.07e-12!34;UBERON:0002619!1.47e-11!22;UBERON:0002616!1.59e-11!59;UBERON:0000956!2.80e-11!25;UBERON:0000203!2.80e-11!25;UBERON:0005743!2.85e-11!86;UBERON:0001950!3.67e-11!20;UBERON:0001017!1.51e-10!82;UBERON:0000955!3.62e-10!69;UBERON:0006238!3.62e-10!69;UBERON:0000153!1.30e-08!129;UBERON:0007811!1.30e-08!129;UBERON:0000200!1.42e-08!6;UBERON:0000924!3.11e-08!173;UBERON:0006601!3.11e-08!173;UBERON:0000033!1.22e-07!123;UBERON:0004121!4.29e-07!169;UBERON:0001986!5.18e-07!18;UBERON:0004638!5.18e-07!18;UBERON:0004852!5.18e-07!18;UBERON:0007023!5.44e-07!115;UBERON:0000483!5.63e-07!309;UBERON:0000119!9.34e-07!312 | |ontology_enrichment_uberon=UBERON:0002346!1.03e-14!90;UBERON:0001049!1.57e-14!57;UBERON:0005068!1.57e-14!57;UBERON:0006241!1.57e-14!57;UBERON:0007135!1.57e-14!57;UBERON:0003056!9.70e-14!61;UBERON:0001893!1.32e-13!34;UBERON:0001869!1.96e-13!32;UBERON:0002780!4.93e-13!41;UBERON:0001890!4.93e-13!41;UBERON:0006240!4.93e-13!41;UBERON:0003075!6.92e-13!86;UBERON:0007284!6.92e-13!86;UBERON:0002791!7.25e-13!33;UBERON:0000073!9.00e-13!94;UBERON:0001016!9.00e-13!94;UBERON:0003080!1.41e-12!42;UBERON:0002020!2.07e-12!34;UBERON:0003528!2.07e-12!34;UBERON:0002619!1.47e-11!22;UBERON:0002616!1.59e-11!59;UBERON:0000956!2.80e-11!25;UBERON:0000203!2.80e-11!25;UBERON:0005743!2.85e-11!86;UBERON:0001950!3.67e-11!20;UBERON:0001017!1.51e-10!82;UBERON:0000955!3.62e-10!69;UBERON:0006238!3.62e-10!69;UBERON:0000153!1.30e-08!129;UBERON:0007811!1.30e-08!129;UBERON:0000200!1.42e-08!6;UBERON:0000924!3.11e-08!173;UBERON:0006601!3.11e-08!173;UBERON:0000033!1.22e-07!123;UBERON:0004121!4.29e-07!169;UBERON:0001986!5.18e-07!18;UBERON:0004638!5.18e-07!18;UBERON:0004852!5.18e-07!18;UBERON:0007023!5.44e-07!115;UBERON:0000483!5.63e-07!309;UBERON:0000119!9.34e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;5.15e-09;7!UBERON:0001229;5.15e-09;7!UBERON:0005969;2.23e-08;2!UBERON:0003956;2.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,5.16e-09,7;UBERON:0000074,5.16e-09,7;UBERON:0001229,5.16e-09,7;UBERON:0001230,5.16e-09,7;UBERON:0003220,5.16e-09,7;UBERON:0005749,5.16e-09,7;UBERON:0004199,5.16e-09,7;UBERON:0004209,5.16e-09,7;UBERON:0004198,5.16e-09,7;UBERON:0005969,1.61e-08,2;UBERON:0003956,1.61e-08,2;UBERON:0005103,5.37e-08,8;UBERON:0000083,5.37e-08,8;UBERON:0009201,5.37e-08,8;UBERON:0006553,5.37e-08,8;UBERON:0003074,5.37e-08,8;UBERON:0003060,5.37e-08,8;UBERON:0000080,3.34e-07,9;UBERON:0002120,3.34e-07,9;UBERON:0004875,3.34e-07,9;UBERON:0005721,3.34e-07,9;UBERON:0005754,3.34e-07,9;UBERON:0007297,3.34e-07,9 | |||
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| ||
|short_description=p16@TRAF3IP2 | |short_description=p16@TRAF3IP2 | ||
}} | }} |
Latest revision as of 21:01, 19 September 2015
Short description: | p16@TRAF3IP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TRAF3IP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368734_5end |
EntrezGene: | TRAF3IP2 |
HGNC: | 1343 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 2.99e-12 | 5 |
mast cell | 2.99e-12 | 5 |
basophil mast progenitor cell | 2.99e-12 | 5 |
endothelial cell | 8.34e-10 | 36 |
glomerular cell | 5.16e-09 | 7 |
kidney corpuscule cell | 5.16e-09 | 7 |
trabecular meshwork cell | 1.61e-08 | 2 |
meso-epithelial cell | 7.79e-08 | 45 |
endocrine cell | 3.34e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 5.16e-09 | 7 |
renal glomerulus | 5.16e-09 | 7 |
renal corpuscle | 5.16e-09 | 7 |
glomerular capsule | 5.16e-09 | 7 |
metanephric mesenchyme | 5.16e-09 | 7 |
glomerular tuft | 5.16e-09 | 7 |
S-shaped body | 5.16e-09 | 7 |
renal vesicle | 5.16e-09 | 7 |
comma-shaped body | 5.16e-09 | 7 |
reticulum trabeculare | 1.61e-08 | 2 |
aqueous drainage system | 1.61e-08 | 2 |
mesonephric epithelium | 5.37e-08 | 8 |
mesonephric tubule | 5.37e-08 | 8 |
nephric duct | 5.37e-08 | 8 |
renal duct | 5.37e-08 | 8 |
mesonephric duct | 5.37e-08 | 8 |
pronephric duct | 5.37e-08 | 8 |
mesonephros | 3.34e-07 | 9 |
pronephros | 3.34e-07 | 9 |
nephrogenic cord | 3.34e-07 | 9 |
pronephric mesoderm | 3.34e-07 | 9 |
rostral part of nephrogenic cord | 3.34e-07 | 9 |
presumptive pronephric mesoderm | 3.34e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.60e-10 | 51 |
immune system cancer | 6.60e-10 | 51 |
leukemia | 3.18e-09 | 39 |