FFCP PHASE1:Hg19::chr15:56363634..56363673,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:56363634..56363673,+
|short_description=p@chr15:56363634..56363673,+
|description=CAGE_peak_at_chr15:56363634..56363673,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:56363634..56363673,+ | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_at_chr15:56363634..56363673,+ | |||
|id=chr15:56363634..56363673,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.68e-09!5;CL:0000066!4.42e-07!254;CL:0002327!9.04e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.43e-16;5!CL:0000540;1.05e-08;6!CL:0000404;1.05e-08;6!CL:1000415;1.46e-07;2!CL:0002327;4.17e-07;4!CL:0002535;7.66e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.22e-16,5;CL:0000540,1.01e-08,6;CL:0000031,1.01e-08,6;CL:0000404,1.01e-08,6;CL:1000415,1.37e-07,2;CL:0002327,4.87e-07,4;CL:0002535,6.39e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;1.05e-08;6 | |||
|ontology_enrichment_disease=DOID:305!6.38e-11!106;DOID:299!8.41e-10!25;DOID:4362!1.67e-08!5;DOID:193!5.36e-08!29;DOID:120!1.27e-07!27;DOID:0050687!3.92e-07!143;DOID:5093!4.34e-07!4;DOID:1612!4.34e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.18e-12;4!DOID:1612;5.18e-12;4!DOID:299;1.96e-10;25!DOID:4362;3.18e-10;5!DOID:120;1.08e-09;27!DOID:193;6.94e-09;29!DOID:4468;1.86e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.53e-12,4;DOID:1612,4.53e-12,4;DOID:299,1.84e-10,25;DOID:4362,2.62e-10,5;DOID:120,9.42e-10,27;DOID:193,6.11e-09,29;DOID:4468,2.01e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003100!9.30e-16!41;UBERON:0005795!4.04e-13!22;UBERON:0003134!7.44e-12!37;UBERON:0000474!7.44e-12!37;UBERON:0000995!7.71e-12!21;UBERON:0003975!4.00e-11!22;UBERON:0001737!5.21e-11!9;UBERON:0000002!9.08e-10!6;UBERON:0001560!9.08e-10!6;UBERON:0004175!2.47e-09!25;UBERON:0000310!9.56e-09!10;UBERON:0003133!6.89e-08!48;UBERON:0001443!8.39e-08!11;UBERON:0001911!9.04e-07!4;UBERON:0005333!9.04e-07!4;UBERON:0008425!9.04e-07!4;UBERON:0005311!9.04e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000995;3.87e-13;17!UBERON:0000002;1.21e-12;6!UBERON:0001560;1.21e-12;6!UBERON:0003975;2.59e-12;18!UBERON:0004175;2.61e-10;21!UBERON:0003100;6.23e-09;41!UBERON:0003134;1.36e-08;33!UBERON:0000474;2.83e-08;37!UBERON:0001911;4.17e-07;4!UBERON:0000310;4.24e-07;10!UBERON:0006955;7.66e-07;2!UBERON:0004801;7.66e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,1.13e-12,6;UBERON:0001560,1.13e-12,6;UBERON:0005795,3.03e-12,22;UBERON:0003100,2.40e-11,41;UBERON:0000995,2.30e-10,21;UBERON:0003975,8.14e-10,22;UBERON:0004175,1.95e-08,25;UBERON:0003134,6.99e-08,37;UBERON:0000474,6.99e-08,37;UBERON:0000310,4.16e-07,10;UBERON:0001911,4.87e-07,4;UBERON:0005333,4.87e-07,4;UBERON:0008425,4.87e-07,4;UBERON:0005311,4.87e-07,4;UBERON:0006955,6.39e-07,2;UBERON:0004801,6.39e-07,2 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71085326900425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44499962275583,3.81844568827169,0,8.17223831068289,5.56625026950238,6.39066685782351,2.59152637538426,10.849796587652,12.774207567654,0,0,0,0,0,0.473227200159376,0.505754070234305,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,1.50793458617446,0,0,0,0,0,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,10.0789276919316,0.708875486211932,0.626909658919938,2.03443756959773,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.921845842708516,0,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.128139149255701,0,0,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47963966309705,3.79543699634705,0,0,0,0,0,0,0,0,0,0,0,10.4129496677416,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11688647996127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,2.51932747854276,0.715880777515084,0,0,0,0,0,0,0,0,0,0,0,4.16684417736373,1.57427999993152,1.44999915086959,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0.32681539055697,4.46155981691531,1.30815439456455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10998064528027,8.81457164059398,0,0,5.97157158647103,0,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84609546029793,0,7.2895090100755,0.979923974143776,1.65412492502765,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0.353024506766001,1.12990370390266,0,0,0,12.906391260497,2.40476460754601,0,0,0.576361668616424,0,0,0,0,2.12124631155116,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,2.39614800598789,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,1.92903778158023,26.8201901364606,63.1469313804361,0.2249738915515,0,0,11.404779378375,10.2447419488958,0,0,0,0.575745591958336,0,0,0,0.542999601753713,0,5.22539776175055,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0.573409195690071,0.110929051536852,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966695013382396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05040537003259,0,0.705351887381368,7.96238241118321,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,2.58591088751157,0.150420656698515,0,0,0,0,2.06998520703863,0,0,0,0,12.580420607419,0,0,0,4.08839768446705,0,0,0,0,0.266107110487916,0.115233987555779,0.171488009437418,0,0,0,0,0,0.314231179832004,0,0.913158720509496,0,0,0,0.47404083519818,0,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0,0,0,0,1.60374807980835,0.62041277132864,0,7.15874763505871,0,0,0,0,0,3.88568794447312,6.55030497693896,0,0,0,0,0,0,0.218559560503957,0,0,1.41405928260976,0.392616934229891,0,1.2679671827502,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,4.2322147241232,0,0,0,2.01866279736126,0,0,0,0,0,0,0,0,0,0.310298987585686,0,4.76128862927481,0,0,0,0,0,0,3.08009970976753,0,0,0,0,0,0,0,0,0.244482888365733,5.2896503181046,0,0,0 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|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71085326900425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44499962275583,3.81844568827169,0,8.17223831068289,5.56625026950238,6.39066685782351,2.59152637538426,10.849796587652,12.774207567654,0,0,0,0,0,0.473227200159376,0.505754070234305,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,1.50793458617446,0,0,0,0,0,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,10.0789276919316,0.708875486211932,0.626909658919938,2.03443756959773,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.921845842708516,0,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.128139149255701,0,0,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47963966309705,3.79543699634705,0,0,0,0,0,0,0,0,0,0,0,10.4129496677416,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11688647996127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,2.51932747854276,0.715880777515084,0,0,0,0,0,0,0,0,0,0,0,4.16684417736373,1.57427999993152,1.44999915086959,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0.32681539055697,4.46155981691531,1.30815439456455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10998064528027,8.81457164059398,0,0,5.97157158647103,0,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84609546029793,0,7.2895090100755,0.979923974143776,1.65412492502765,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0.353024506766001,1.12990370390266,0,0,0,12.906391260497,2.40476460754601,0,0,0.576361668616424,0,0,0,0,2.12124631155116,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,2.39614800598789,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,1.92903778158023,26.8201901364606,63.1469313804361,0.2249738915515,0,0,11.404779378375,10.2447419488958,0,0,0,0.575745591958336,0,0,0,0.542999601753713,0,5.22539776175055,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0.573409195690071,0.110929051536852,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966695013382396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05040537003259,0,0.705351887381368,7.96238241118321,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,2.58591088751157,0.150420656698515,0,0,0,0,2.06998520703863,0,0,0,0,12.580420607419,0,0,0,4.08839768446705,0,0,0,0,0.266107110487916,0.115233987555779,0.171488009437418,0,0,0,0,0,0.314231179832004,0,0.913158720509496,0,0,0,0.47404083519818,0,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0,0,0,0,1.60374807980835,0.62041277132864,0,7.15874763505871,0,0,0,0,0,3.88568794447312,6.55030497693896,0,0,0,0,0,0,0.218559560503957,0,0,1.41405928260976,0.392616934229891,0,1.2679671827502,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,4.2322147241232,0,0,0,2.01866279736126,0,0,0,0,0,0,0,0,0,0.310298987585686,0,4.76128862927481,0,0,0,0,0,0,3.08009970976753,0,0,0,0,0,0,0,0,0.244482888365733,5.2896503181046,0,0,0 | ||
|short_description=p@chr15:56363634..56363673,+ | |||
}} | }} |
Latest revision as of 02:42, 25 July 2015
Short description: | p@chr15:56363634..56363673, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:56363634..56363673, + |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.22e-16 | 5 |
neuron | 1.01e-08 | 6 |
neuroblast | 1.01e-08 | 6 |
electrically signaling cell | 1.01e-08 | 6 |
epithelial cell of gall bladder | 1.37e-07 | 2 |
mammary gland epithelial cell | 4.87e-07 | 4 |
epithelial cell of cervix | 6.39e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 1.13e-12 | 6 |
neck of organ | 1.13e-12 | 6 |
embryonic uterus | 3.03e-12 | 22 |
female organism | 2.40e-11 | 41 |
uterus | 2.30e-10 | 21 |
internal female genitalia | 8.14e-10 | 22 |
internal genitalia | 1.95e-08 | 25 |
female reproductive organ | 6.99e-08 | 37 |
female reproductive system | 6.99e-08 | 37 |
breast | 4.16e-07 | 10 |
mammary gland | 4.87e-07 | 4 |
mammary bud | 4.87e-07 | 4 |
mammary ridge | 4.87e-07 | 4 |
mammary placode | 4.87e-07 | 4 |
uterine epithelium | 6.39e-07 | 2 |
cervix epithelium | 6.39e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.53e-12 | 4 |
breast cancer | 4.53e-12 | 4 |
adenocarcinoma | 1.84e-10 | 25 |
cervical cancer | 2.62e-10 | 5 |
female reproductive organ cancer | 9.42e-10 | 27 |
reproductive organ cancer | 6.11e-09 | 29 |
clear cell adenocarcinoma | 2.01e-07 | 2 |