FFCP PHASE1:Hg19::chr5:75379224..75379243,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22987 | |EntrezGene=22987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30670 | |HGNC=30670 | ||
|TSSclassifier=strong | |||
|UniProt=Q496J9 | |UniProt=Q496J9 | ||
|association_with_transcript=0bp_to_ENST00000322285_5end | |association_with_transcript=0bp_to_ENST00000322285_5end | ||
|cluster_id=chr5:75379224..75379243,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_2_at_SV2C_5end | |description=CAGE_peak_2_at_SV2C_5end | ||
|id=chr5:75379224..75379243,+ | |id=chr5:75379224..75379243,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.12e-14;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.81e-16;82!UBERON:0006241;4.64e-09;3!UBERON:0003057;4.64e-09;3!UBERON:0010122;2.46e-07;2 | |||
|ontology_enrichment_disease=DOID:169!2.48e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:169;8.59e-12;6!DOID:171;1.16e-09;10!DOID:3095;2.25e-08;22!DOID:2994;2.25e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.80e-12,6;DOID:171,1.03e-09,10;DOID:3095,1.56e-08,22;DOID:2994,1.56e-08,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;2.51e-42;32!UBERON:0003528;2.80e-41;34!UBERON:0002020;2.80e-41;34!UBERON:0002791;4.16e-39;32!UBERON:0001893;4.19e-39;34!UBERON:0002780;4.35e-36;41!UBERON:0001890;4.35e-36;41!UBERON:0002619;2.01e-34;22!UBERON:0001950;7.09e-34;20!UBERON:0000073;8.50e-31;53!UBERON:0002616;8.50e-31;53!UBERON:0000956;7.14e-30;25!UBERON:0000203;7.14e-30;25!UBERON:0001017;3.27e-23;75!UBERON:0001016;1.91e-21;83!UBERON:0000125;7.88e-21;9!UBERON:0002308;7.88e-21;9!UBERON:0000955;6.65e-20;68!UBERON:0002298;1.93e-16;6!UBERON:0009663;1.83e-15;7!UBERON:0001872;1.01e-14;5!UBERON:0000013;3.12e-14;5!UBERON:0002410;3.12e-14;5!UBERON:0000369;5.71e-13;4!UBERON:0002435;5.71e-13;4!UBERON:0000204;5.71e-13;4!UBERON:0004732;3.44e-12;13!UBERON:0002420;7.88e-12;9!UBERON:0007245;7.88e-12;9!UBERON:0010009;7.88e-12;9!UBERON:0010011;7.88e-12;9!UBERON:0000454;7.88e-12;9!UBERON:0000200;9.72e-12;6!UBERON:0000010;1.17e-10;8!UBERON:0004733;2.26e-10;12!UBERON:0002028;2.26e-10;12!UBERON:0005383;3.40e-10;3!UBERON:0005382;3.40e-10;3!UBERON:0000988;1.48e-09;3!UBERON:0002021;2.49e-09;5!UBERON:0002240;4.64e-09;3!UBERON:0005174;4.64e-09;3!UBERON:0001137;4.64e-09;3!UBERON:0011216;4.75e-09;132!UBERON:0007023;1.06e-08;114!UBERON:0001870;1.21e-08;3!UBERON:0001896;1.35e-08;3!UBERON:0005290;1.35e-08;3!UBERON:0000922;1.71e-08;49!UBERON:0001873;2.46e-07;2!UBERON:0002148;3.78e-07;2!UBERON:0006331;3.78e-07;2!UBERON:0009662;3.78e-07;2!UBERON:0001875;6.45e-07;2!UBERON:0006514;6.45e-07;2 | |||
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|short_description=p2@SV2C | |short_description=p2@SV2C | ||
}} | }} |
Latest revision as of 17:49, 18 September 2015
Short description: | p2@SV2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SV2C_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000322285_5end |
EntrezGene: | SV2C |
HGNC: | 30670 |
UniProt: | Q496J9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.80e-12 | 6 |
neuroectodermal tumor | 1.03e-09 | 10 |
germ cell and embryonal cancer | 1.56e-08 | 22 |
germ cell cancer | 1.56e-08 | 22 |