FFCP PHASE1:Hg19::chr15:48808480..48808519,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:48808480..48808519,-
|short_description=p@chr15:48808480..48808519,-
|description=CAGE_peak_at_chr15:48808480..48808519,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:48808480..48808519,- | |||
|coexpression_cluster_id=C834 | |||
|description=CAGE_peak_at_chr15:48808480..48808519,- | |||
|id=chr15:48808480..48808519,- | |||
|ontology_enrichment_celltype=CL:0000055!1.18e-26!180;CL:0000057!1.36e-23!75;CL:0002620!1.09e-12!23;CL:0000680!6.44e-10!57;CL:0000056!6.44e-10!57;CL:0000355!6.44e-10!57;CL:0002334!1.92e-09!12;CL:0000183!4.00e-09!59;CL:0000187!8.31e-09!54;CL:0000192!7.62e-08!42;CL:0000514!7.62e-08!42;CL:0000359!7.43e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.98e-16;12!CL:0002620;3.43e-12;23!CL:0000057;1.12e-11;73!CL:0000153;1.28e-08;9!CL:0000447;1.28e-08;9!CL:1000306;2.22e-07;4!CL:0002547;2.22e-07;4!CL:0002320;2.56e-07;188!CL:0000349;6.23e-07;19!CL:0000138;7.27e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.59e-26,76;CL:0002334,2.35e-16,12;CL:0000048,4.68e-16,427;CL:0000723,2.01e-15,433;CL:0000034,1.31e-14,441;CL:0002620,3.43e-12,23;CL:0000134,4.67e-11,354;CL:0002320,7.04e-11,361;CL:0000153,8.72e-09,9;CL:0000447,8.72e-09,9;CL:0000219,3.69e-08,386;CL:1000306,2.42e-07,4;CL:0002547,2.42e-07,4;CL:0000058,4.86e-07,6;CL:0000138,4.86e-07,6;CL:0000349,6.96e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.16e-08;5!DOID:450;2.16e-08;5!DOID:66;2.16e-08;5!DOID:423;2.16e-08;5!DOID:0080000;2.16e-08;5!DOID:11722;2.16e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.36e-08,5;DOID:450,2.36e-08,5;DOID:66,2.36e-08,5;DOID:423,2.36e-08,5;DOID:0080000,2.36e-08,5;DOID:11722,2.36e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.10e-12!83;UBERON:0002329!1.10e-12!83;UBERON:0003077!1.10e-12!83;UBERON:0003059!1.10e-12!83;UBERON:0007282!1.10e-12!83;UBERON:0009618!1.10e-12!83;UBERON:0007285!1.10e-12!83;UBERON:0004290!1.96e-11!70;UBERON:0004872!4.95e-11!84;UBERON:0002385!6.24e-11!63;UBERON:0001015!6.24e-11!63;UBERON:0000383!6.24e-11!63;UBERON:0001134!1.85e-10!61;UBERON:0002036!1.85e-10!61;UBERON:0003082!1.85e-10!61;UBERON:0000486!8.36e-10!82;UBERON:0005256!2.96e-09!143;UBERON:0000475!3.64e-09!365;UBERON:0004923!3.85e-09!57;UBERON:0002199!1.04e-07!45;UBERON:0002416!1.04e-07!45;UBERON:0002100!1.37e-07!216;UBERON:0001637!2.39e-07!42;UBERON:0003509!2.39e-07!42;UBERON:0004572!2.39e-07!42;UBERON:0002049!3.19e-07!79;UBERON:0007798!3.19e-07!79;UBERON:0005631!4.61e-07!14;UBERON:0000158!4.61e-07!14;UBERON:0003102!5.68e-07!95;UBERON:0001009!8.88e-07!113;UBERON:0000468!9.74e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.23e-08;198!UBERON:0004457;2.05e-08;9!UBERON:0000042;2.05e-08;9!UBERON:0004797;2.22e-07;4!UBERON:0000415;2.22e-07;4!UBERON:0007240;2.22e-07;4!UBERON:0005742;2.22e-07;4!UBERON:0005734;2.22e-07;4!UBERON:0004664;2.22e-07;4!UBERON:0004663;2.22e-07;4!UBERON:0002199;7.44e-07;46!UBERON:0002416;7.44e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.36e-11,371;UBERON:0004923,2.61e-09,66;UBERON:0002199,3.04e-09,46;UBERON:0002416,3.04e-09,46;UBERON:0003124,4.69e-08,7;UBERON:0003102,6.96e-08,99;UBERON:0002097,9.44e-08,41;UBERON:0000415,2.42e-07,4;UBERON:0007240,2.42e-07,4;UBERON:0005742,2.42e-07,4;UBERON:0005734,2.42e-07,4;UBERON:0004664,2.42e-07,4;UBERON:0004663,2.42e-07,4;UBERON:0005631,2.75e-07,14;UBERON:0000158,2.75e-07,14 | |||
|phase1_expression=4.1786027232228,3.63970890614671,4.93340414335899,1.0007329835313,0.893922188854576,3.48935409640147,2.53299878168311,0.631719873426831,0.522371256399677,0,0,0.873765488520689,0.527533956456907,0.37129905888014,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,6.86734389530676,7.01873074890245,5.79386075843295,2.3858578411533,1.94653948121054,0.567208902984407,1.33037638477538,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.550236083880135,0.417989933073621,0,0,0,0,0,0.488124115096339,0,0.81014194788176,0.357198913136319,0,0.112611480483322,0,0,0,0,0,0,2.98183171017191,6.07826455989983,3.17782033951725,26.1021324881421,2.4826786753885,1.12135520028461,1.06748995729705,3.20667812942308,0.622422070799533,1.48181739276657,0.490385709340376,1.21085942115945,2.30470369792,0,0.624320153660641,0.570471821544449,1.19558944441441,0.587172493218824,0.485618833104395,0.140450806702248,0.204154171254893,0.245668634623536,1.23990937410919,5.94001428641027,4.20353779773547,0,0.718618141816238,0.505008341862199,0.375355559615893,0.554128230968366,2.63386572528503,1.5324389789951,2.55404700141215,0.340296549480063,4.12596162084383,3.20336083227851,2.33125091275518,5.40163972951924,2.57631323096097,5.66809188100384,2.79175284497385,1.85653965465393,3.02054715999716,3.28163906517349,4.97069452668416,4.0411514204703,4.61512470271599,2.21654616100809,0.339121184620975,0,0,0,0,0,0,0.414644220061482,0,0,0,1.28648187638577,0,0,0.721879481669586,0.354920400119532,0,0,0.441175890929576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0.352226082707465,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,1.29271715757778,0,0,0.26593811658487,0,0,0,0,1.00084595560703,1.08524321078289,0,0.325736184293735,1.06617584622764,0,0,0,0.399891964728228,0,0,0,1.19812427745791,0,0,1.88215698667853,1.84928690295345,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,0,0,1.87173775377726,2.67643483195743,0.315404830067869,1.63997980989798,5.11608369537122,2.27407504055985,2.0694614258501,1.99267679560631,0,2.34585759063824,0.391602314925481,0.686286847621712,0,0,0,0.606255142892519,6.65741758041988,1.81434175997808,5.21026396419431,1.99500565274481,5.61320188866147,4.86928767171664,2.04682899626681,4.18220194973379,1.48418066444991,1.07946785661859,3.9063579568888,2.54594183642808,5.71179872101983,1.04589340613963,0,0.200506470303285,0,1.03333003348146,1.0925470080403,1.31124414959424,0,0.231046011313244,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.824328093181778,0,0,0,0,16.068392984416,3.38347514022427,0.462145851343933,1.5350367472613,0,1.71872391789238,0.580066775656914,0.767039646744908,1.78064071293475,0.165284915360978,0,0,0,0.464845549297286,13.8517432605482,0,1.54016790088044,1.59691809095107,0,2.03856641014312,0.286249773483982,0.744316738719335,1.89827654831236,0.953150969619124,0,0.855877976067841,2.22742273548156,1.56989728039846,1.07923474549989,0.274537029736055,0.706874414074119,0,0,0.421258456238981,0.48763373908959,2.43713489631284,1.05650146756755,2.04749867111979,2.96951407102797,1.13008116620243,0.551365343546124,1.99031692572366,1.31535265576129,0,1.31178950409327,0.811641507850816,0.6196469961995,0.845086807596724,0,0.392996164052485,0.7133421029625,0,7.59987487071591,7.24448764511784,0,0.349934720244983,0,0.670302275535787,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95572084034114,0,0,0,2.14870036263921,1.18785872333055,1.53580351049616,0,0,1.33570446027487,0,0,0.398495976502139,0.276283915531148,0,0.409074730008619,0,4.66559381492711,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,1.07730361905316,1.48124672601102,0,0,0.108647371922008,3.50901275705111,2.56473261525214,12.2597998484286,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.269604531922708,0.802577647298789,0,0,0,0,0.789168805698781,0,0,0.568679216656392,0,0,0,0,0,0,0,0.138674673013139,0,0,0,1.22308667769421,0,0.0967563312890851,0,0,0.872901148395775,0,1.12990370390266,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0.599428828746391,0,0,0.171594997861965,0,0,0,0.407712618220842,0.523014231561666,0,0,0,0.136905378891993,0,0.429765441419957,0,1.11712960508902,0.458320848023367,0,0.199679000498991,0.858452096273142,0.223171457441873,0,1.44119953416961,0,0,0,0.0674035438541849,0.196854963029498,0,0,0,0,0,0,0,0,0.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| ||
|short_description=p@chr15:48808480..48808519,- | |||
}} | }} |
Latest revision as of 02:09, 25 July 2015
Short description: | p@chr15:48808480..48808519, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:48808480..48808519, - |
Coexpression cluster: | C834_Fibroblast_Sertoli_chorionic_Smooth_Synoviocyte_Preadipocyte_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.59e-26 | 76 |
preadipocyte | 2.35e-16 | 12 |
multi fate stem cell | 4.68e-16 | 427 |
somatic stem cell | 2.01e-15 | 433 |
stem cell | 1.31e-14 | 441 |
skin fibroblast | 3.43e-12 | 23 |
mesenchymal cell | 4.67e-11 | 354 |
connective tissue cell | 7.04e-11 | 361 |
GAG secreting cell | 8.72e-09 | 9 |
carbohydrate secreting cell | 8.72e-09 | 9 |
motile cell | 3.69e-08 | 386 |
fibroblast of tunica adventitia of artery | 2.42e-07 | 4 |
fibroblast of the aortic adventitia | 2.42e-07 | 4 |
chondroblast | 4.86e-07 | 6 |
chondrocyte | 4.86e-07 | 6 |
extraembryonic cell | 6.96e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.36e-11 | 371 |
organ component layer | 2.61e-09 | 66 |
integument | 3.04e-09 | 46 |
integumental system | 3.04e-09 | 46 |
chorion | 4.69e-08 | 7 |
surface structure | 6.96e-08 | 99 |
skin of body | 9.44e-08 | 41 |
artery wall | 2.42e-07 | 4 |
tunica adventitia of artery | 2.42e-07 | 4 |
adventitia | 2.42e-07 | 4 |
tunica adventitia of blood vessel | 2.42e-07 | 4 |
aorta tunica adventitia | 2.42e-07 | 4 |
aorta wall | 2.42e-07 | 4 |
extraembryonic membrane | 2.75e-07 | 14 |
membranous layer | 2.75e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.36e-08 | 5 |
myotonic disease | 2.36e-08 | 5 |
muscle tissue disease | 2.36e-08 | 5 |
myopathy | 2.36e-08 | 5 |
muscular disease | 2.36e-08 | 5 |
myotonic dystrophy | 2.36e-08 | 5 |