FFCP PHASE1:Hg19::chr4:188358861..188358867,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:188358861..188358867,- | |||
|description=CAGE_peak_at_chr4:188358861..188358867,- | |description=CAGE_peak_at_chr4:188358861..188358867,- | ||
|id=chr4:188358861..188358867,- | |id=chr4:188358861..188358867,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000054;3.34e-11;2!CL:0000137;3.34e-11;2!CL:0000092;3.34e-11;2!CL:0000322;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,4.09e-11,2;CL:0000137,4.09e-11,2;CL:0000092,4.09e-11,2;CL:0000322,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.16e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;5.16e-21;1!DOID:3165;5.16e-21;1!DOID:3151;5.16e-21;1!DOID:0060121;5.16e-21;1!DOID:2438;5.16e-21;1!DOID:4418;5.16e-21;1!DOID:3149;5.16e-21;1!DOID:4929;2.12e-11;2!DOID:3451;3.34e-11;2!DOID:4159;3.34e-11;2!DOID:0060122;3.34e-11;2!DOID:200;3.34e-11;2!DOID:4305;3.34e-11;2!DOID:3910;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.22e-21,1;DOID:3149,4.22e-21,1;DOID:0060085,7.72e-21,1;DOID:3165,7.72e-21,1;DOID:0060121,7.72e-21,1;DOID:2438,7.72e-21,1;DOID:4418,7.72e-21,1;DOID:4929,2.02e-11,2;DOID:3451,3.02e-11,2;DOID:4159,3.02e-11,2;DOID:0060122,3.02e-11,2;DOID:200,4.09e-11,2;DOID:4305,4.09e-11,2;DOID:3910,4.52e-11,2;DOID:0050686,9.41e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001155!5.74e-07!9 | |ontology_enrichment_uberon=UBERON:0001155!5.74e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.08e-21;1!UBERON:0003703;2.08e-21;1!UBERON:0001174;2.08e-21;1!UBERON:0004914;2.08e-21;1!UBERON:0002134;5.16e-21;1!UBERON:0005208;5.16e-21;1!UBERON:0004145;5.16e-21;1!UBERON:0005946;5.16e-21;1!UBERON:0005965;5.16e-21;1!UBERON:0002078;5.16e-21;1!UBERON:0000014;1.15e-20;4!UBERON:0004903;3.34e-11;2!UBERON:0002081;3.34e-11;2!UBERON:0002133;3.34e-11;2!UBERON:0002173;3.34e-11;2!UBERON:0002186;3.34e-11;2!UBERON:0000058;6.16e-09;10!UBERON:0002114;5.01e-08;2!UBERON:0004821;6.78e-08;3!UBERON:0007499;6.78e-08;3!UBERON:0003978;6.78e-08;3!UBERON:0004151;6.78e-08;3!UBERON:0000946;6.78e-08;3!UBERON:0003215;6.78e-08;3!UBERON:0010368;6.78e-08;3!UBERON:0009911;6.78e-08;3!UBERON:0002299;6.78e-08;3!UBERON:0006524;6.78e-08;3!UBERON:0008874;6.78e-08;3!UBERON:0002169;6.78e-08;3!UBERON:0004894;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.88e-21,1;UBERON:0003703,1.88e-21,1;UBERON:0001174,1.88e-21,1;UBERON:0004914,1.88e-21,1;UBERON:0002134,3.45e-21,1;UBERON:0005208,3.45e-21,1;UBERON:0005946,3.45e-21,1;UBERON:0005965,3.45e-21,1;UBERON:0002078,3.45e-21,1;UBERON:0000014,1.28e-20,4;UBERON:0002081,2.73e-11,2;UBERON:0002133,2.73e-11,2;UBERON:0010227,2.73e-11,2;UBERON:0004903,4.52e-11,2;UBERON:0002173,4.52e-11,2;UBERON:0002186,4.52e-11,2;UBERON:0002114,4.84e-08,2;UBERON:0003978,5.93e-08,3;UBERON:0009751,5.93e-08,3;UBERON:0004151,5.93e-08,3;UBERON:0000946,5.93e-08,3;UBERON:0002523,5.93e-08,3;UBERON:0005983,5.93e-08,3;UBERON:0004145,5.93e-08,3;UBERON:0002165,5.93e-08,3;UBERON:0002062,5.93e-08,3;UBERON:0007280,5.93e-08,3;UBERON:0004821,8.29e-08,3;UBERON:0003215,8.29e-08,3;UBERON:0010368,8.29e-08,3;UBERON:0009911,8.29e-08,3;UBERON:0002299,8.29e-08,3;UBERON:0006524,8.29e-08,3;UBERON:0008874,8.29e-08,3;UBERON:0002169,8.29e-08,3;UBERON:0004894,8.29e-08,3 | |||
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| ||
|short_description=p@chr4:188358861..188358867,- | |short_description=p@chr4:188358861..188358867,- | ||
}} | }} |
Latest revision as of 04:11, 30 July 2015
Short description: | p@chr4:188358861..188358867, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:188358861..188358867, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 4.09e-11 | 2 |
osteocyte | 4.09e-11 | 2 |
osteoclast | 4.09e-11 | 2 |
pneumocyte | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.88e-21 | 1 |
extrahepatic bile duct | 1.88e-21 | 1 |
common bile duct | 1.88e-21 | 1 |
duodenal papilla | 1.88e-21 | 1 |
tricuspid valve | 3.45e-21 | 1 |
right atrium valve | 3.45e-21 | 1 |
outflow tract of atrium | 3.45e-21 | 1 |
outflow part of right atrium | 3.45e-21 | 1 |
right cardiac atrium | 3.45e-21 | 1 |
zone of skin | 1.28e-20 | 4 |
cardiac atrium | 2.73e-11 | 2 |
atrioventricular valve | 2.73e-11 | 2 |
future cardiac atrium | 2.73e-11 | 2 |
bronchoalveolar duct junction | 4.52e-11 | 2 |
alveolar duct | 4.52e-11 | 2 |
bronchiole | 4.52e-11 | 2 |
duodenum | 4.84e-08 | 2 |
valve | 5.93e-08 | 3 |
cardiac mesenchyme | 5.93e-08 | 3 |
cardiac chamber | 5.93e-08 | 3 |
cardial valve | 5.93e-08 | 3 |
tunica intima | 5.93e-08 | 3 |
heart layer | 5.93e-08 | 3 |
outflow tract | 5.93e-08 | 3 |
endocardium | 5.93e-08 | 3 |
endocardial cushion | 5.93e-08 | 3 |
presumptive endocardium | 5.93e-08 | 3 |
pulmonary alveolus epithelium | 8.29e-08 | 3 |
alveolus | 8.29e-08 | 3 |
pulmonary lobule | 8.29e-08 | 3 |
lobule | 8.29e-08 | 3 |
alveolus of lung | 8.29e-08 | 3 |
alveolar system | 8.29e-08 | 3 |
pulmonary acinus | 8.29e-08 | 3 |
alveolar sac | 8.29e-08 | 3 |
alveolar wall | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.22e-21 | 1 |
keratoacanthoma | 4.22e-21 | 1 |
organ system benign neoplasm | 7.72e-21 | 1 |
skin benign neoplasm | 7.72e-21 | 1 |
integumentary system benign neoplasm | 7.72e-21 | 1 |
dermis tumor | 7.72e-21 | 1 |
cutaneous fibrous histiocytoma | 7.72e-21 | 1 |
tubular adenocarcinoma | 2.02e-11 | 2 |
skin carcinoma | 3.02e-11 | 2 |
skin cancer | 3.02e-11 | 2 |
integumentary system cancer | 3.02e-11 | 2 |
giant cell tumor | 4.09e-11 | 2 |
bone giant cell tumor | 4.09e-11 | 2 |
lung adenocarcinoma | 4.52e-11 | 2 |
organ system cancer | 9.41e-07 | 137 |