FFCP PHASE1:Hg19::chr2:21233685..21233694,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=236bp_to_X03326_5end | |association_with_transcript=236bp_to_X03326_5end | ||
|cluster_id=chr2:21233685..21233694,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_57_at_APOB_5end | |description=CAGE_peak_57_at_APOB_5end | ||
|id=chr2:21233685..21233694,- | |id=chr2:21233685..21233694,- | ||
|ontology_enrichment_celltype=CL:0000181!1.08e-31!12;CL:0000417!1.08e-31!12;CL:0000668!1.08e-31!12;CL:0000414!1.08e-31!12;CL:0000412!1.08e-31!12;CL:0000182!1.08e-31!12;CL:0000223!1.54e-10!59 | |ontology_enrichment_celltype=CL:0000181!1.08e-31!12;CL:0000417!1.08e-31!12;CL:0000668!1.08e-31!12;CL:0000414!1.08e-31!12;CL:0000412!1.08e-31!12;CL:0000182!1.08e-31!12;CL:0000223!1.54e-10!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.09e-53;12!CL:0000047;2.85e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.50e-54,12;CL:0000223,4.21e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.14e-40;11!UBERON:0009497;1.83e-34;13!UBERON:0001041;4.67e-15;30!UBERON:0003104;1.51e-14;31!CL:0000223;2.24e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.48e-35!19;UBERON:0006925!4.48e-35!19;UBERON:0008836!4.48e-35!19;UBERON:0008835!3.48e-30!22;UBERON:0003894!3.48e-30!22;UBERON:0009854!7.74e-29!23;UBERON:0007499!1.82e-26!25;UBERON:0009497!1.82e-26!25;UBERON:0000015!1.82e-26!25;UBERON:0002423!1.82e-26!25;UBERON:0006235!1.82e-26!25;UBERON:0004161!1.82e-26!25;UBERON:0005057!2.04e-25!26;UBERON:0009856!2.04e-25!26;UBERON:0002365!3.51e-21!31;UBERON:0002330!3.51e-21!31;UBERON:0002368!1.16e-18!35;UBERON:0003929!3.19e-18!54;UBERON:0000949!2.58e-14!45;UBERON:0004921!7.98e-14!129;UBERON:0004185!7.98e-14!129;UBERON:0002530!1.89e-13!59;UBERON:0005172!1.52e-11!55;UBERON:0005173!1.52e-11!55;UBERON:0005911!1.56e-11!82;UBERON:0001007!3.62e-11!155;UBERON:0001555!3.62e-11!155;UBERON:0007026!3.62e-11!155;UBERON:0002417!2.58e-10!61;UBERON:0000916!2.58e-10!61;UBERON:0004119!4.51e-10!169;UBERON:0000925!4.51e-10!169;UBERON:0006595!4.51e-10!169;UBERON:0000160!3.43e-09!27;UBERON:0005409!4.05e-07!35;UBERON:0002108!7.20e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.64e-60;19!UBERON:0006925;5.64e-60;19!UBERON:0002423;1.51e-45;25!UBERON:0002365;2.69e-35;31!UBERON:0002330;2.69e-35;31!UBERON:0002368;4.13e-31;33!UBERON:0000949;9.41e-23;43!UBERON:0005172;1.37e-13;52!UBERON:0005173;1.37e-13;52!UBERON:0002417;6.63e-12;58!UBERON:0000916;6.63e-12;58!UBERON:0002530;8.61e-12;57!UBERON:0001007;1.16e-09;81!UBERON:0002114;2.19e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.84e-60,19;UBERON:0006925,4.84e-60,19;UBERON:0008836,4.84e-60,19;UBERON:0008835,7.77e-52,22;UBERON:0003894,7.77e-52,22;UBERON:0009854,1.41e-49,23;UBERON:0007499,1.35e-45,25;UBERON:0009497,1.35e-45,25;UBERON:0000015,1.35e-45,25;UBERON:0002423,1.35e-45,25;UBERON:0006235,1.35e-45,25;UBERON:0004161,1.35e-45,25;UBERON:0009856,7.77e-44,26;UBERON:0002365,9.86e-37,31;UBERON:0002330,9.86e-37,31;UBERON:0002368,1.66e-32,35;UBERON:0000949,3.20e-25,45;UBERON:0003929,5.81e-21,54;UBERON:0005172,5.81e-21,54;UBERON:0005173,5.81e-21,54;UBERON:0002530,3.72e-19,59;UBERON:0002417,7.88e-19,60;UBERON:0000916,7.88e-19,60;UBERON:0005911,1.15e-13,82;UBERON:0001041,7.44e-13,87;UBERON:0004921,9.32e-12,118;UBERON:0005177,5.25e-11,101;UBERON:0009569,7.11e-10,112;UBERON:0001007,1.82e-09,145;UBERON:0001555,1.82e-09,145;UBERON:0007026,1.82e-09,145;UBERON:0003914,1.98e-09,117;UBERON:0005256,5.07e-09,122;UBERON:0011216,6.17e-09,223;UBERON:0004119,1.61e-08,160;UBERON:0000925,1.61e-08,160;UBERON:0006595,1.61e-08,160;UBERON:0002114,2.19e-07,2;UBERON:0000490,2.46e-07,148;UBERON:0000025,5.76e-07,192;UBERON:0001048,9.70e-07,160;UBERON:0003104,9.70e-07,160;UBERON:0009142,9.70e-07,160 | |||
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|short_description=p57@APOB | |short_description=p57@APOB | ||
}} | }} |
Latest revision as of 23:32, 19 September 2015
Short description: | p57@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_57_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 236bp_to_X03326_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.50e-54 | 12 |
endodermal cell | 4.21e-11 | 58 |