FFCP PHASE1:Hg19::chr2:21229000..21229020,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=-443bp_to_M12413_5end | |association_with_transcript=-443bp_to_M12413_5end | ||
|cluster_id=chr2:21229000..21229020,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_16_at_APOB_5end | |description=CAGE_peak_16_at_APOB_5end | ||
|id=chr2:21229000..21229020,- | |id=chr2:21229000..21229020,- | ||
|ontology_enrichment_celltype=CL:0000181!5.78e-29!12;CL:0000417!5.78e-29!12;CL:0000668!5.78e-29!12;CL:0000414!5.78e-29!12;CL:0000412!5.78e-29!12;CL:0000182!5.78e-29!12;CL:0000223!1.63e-09!59 | |ontology_enrichment_celltype=CL:0000181!5.78e-29!12;CL:0000417!5.78e-29!12;CL:0000668!5.78e-29!12;CL:0000414!5.78e-29!12;CL:0000412!5.78e-29!12;CL:0000182!5.78e-29!12;CL:0000223!1.63e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.49e-43;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.80e-43,12;CL:0000223,1.11e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.79e-32;11!UBERON:0009497;1.67e-27;13!UBERON:0001041;5.92e-12;30!UBERON:0003104;1.49e-11;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.37e-32!19;UBERON:0006925!6.37e-32!19;UBERON:0008836!6.37e-32!19;UBERON:0008835!1.89e-27!22;UBERON:0003894!1.89e-27!22;UBERON:0009854!3.23e-26!23;UBERON:0007499!4.78e-24!25;UBERON:0009497!4.78e-24!25;UBERON:0000015!4.78e-24!25;UBERON:0002423!4.78e-24!25;UBERON:0006235!4.78e-24!25;UBERON:0004161!4.78e-24!25;UBERON:0005057!4.36e-23!26;UBERON:0009856!4.36e-23!26;UBERON:0002365!3.27e-19!31;UBERON:0002330!3.27e-19!31;UBERON:0002368!6.59e-17!35;UBERON:0003929!1.86e-16!54;UBERON:0005172!4.66e-13!55;UBERON:0005173!4.66e-13!55;UBERON:0000949!6.22e-13!45;UBERON:0004921!2.90e-12!129;UBERON:0004185!2.90e-12!129;UBERON:0002530!4.11e-12!59;UBERON:0002417!1.19e-11!61;UBERON:0000916!1.19e-11!61;UBERON:0005911!2.47e-10!82;UBERON:0004119!2.71e-10!169;UBERON:0000925!2.71e-10!169;UBERON:0006595!2.71e-10!169;UBERON:0001007!7.75e-10!155;UBERON:0001555!7.75e-10!155;UBERON:0007026!7.75e-10!155;UBERON:0000160!2.26e-08!27 | |ontology_enrichment_uberon=UBERON:0002107!6.37e-32!19;UBERON:0006925!6.37e-32!19;UBERON:0008836!6.37e-32!19;UBERON:0008835!1.89e-27!22;UBERON:0003894!1.89e-27!22;UBERON:0009854!3.23e-26!23;UBERON:0007499!4.78e-24!25;UBERON:0009497!4.78e-24!25;UBERON:0000015!4.78e-24!25;UBERON:0002423!4.78e-24!25;UBERON:0006235!4.78e-24!25;UBERON:0004161!4.78e-24!25;UBERON:0005057!4.36e-23!26;UBERON:0009856!4.36e-23!26;UBERON:0002365!3.27e-19!31;UBERON:0002330!3.27e-19!31;UBERON:0002368!6.59e-17!35;UBERON:0003929!1.86e-16!54;UBERON:0005172!4.66e-13!55;UBERON:0005173!4.66e-13!55;UBERON:0000949!6.22e-13!45;UBERON:0004921!2.90e-12!129;UBERON:0004185!2.90e-12!129;UBERON:0002530!4.11e-12!59;UBERON:0002417!1.19e-11!61;UBERON:0000916!1.19e-11!61;UBERON:0005911!2.47e-10!82;UBERON:0004119!2.71e-10!169;UBERON:0000925!2.71e-10!169;UBERON:0006595!2.71e-10!169;UBERON:0001007!7.75e-10!155;UBERON:0001555!7.75e-10!155;UBERON:0007026!7.75e-10!155;UBERON:0000160!2.26e-08!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.62e-47;19!UBERON:0006925;1.62e-47;19!UBERON:0002423;5.35e-36;25!UBERON:0002365;7.70e-28;31!UBERON:0002330;7.70e-28;31!UBERON:0002108;7.82e-26;4!UBERON:0002368;1.50e-24;33!UBERON:0000949;5.58e-18;43!UBERON:0000160;9.34e-13;17!UBERON:0001007;2.48e-12;81!UBERON:0005172;9.10e-11;52!UBERON:0005173;9.10e-11;52!UBERON:0005409;4.80e-10;22!UBERON:0002417;1.80e-09;58!UBERON:0000916;1.80e-09;58!UBERON:0002530;2.24e-09;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.58e-47,19;UBERON:0006925,1.58e-47,19;UBERON:0008836,1.58e-47,19;UBERON:0008835,5.52e-41,22;UBERON:0003894,5.52e-41,22;UBERON:0009854,3.50e-39,23;UBERON:0007499,5.23e-36,25;UBERON:0009497,5.23e-36,25;UBERON:0000015,5.23e-36,25;UBERON:0002423,5.23e-36,25;UBERON:0006235,5.23e-36,25;UBERON:0004161,5.23e-36,25;UBERON:0009856,1.33e-34,26;UBERON:0002365,6.16e-29,31;UBERON:0002330,6.16e-29,31;UBERON:0002108,7.18e-26,4;UBERON:0002368,1.45e-25,35;UBERON:0000949,9.43e-20,45;UBERON:0003929,2.36e-16,54;UBERON:0005172,2.36e-16,54;UBERON:0005173,2.36e-16,54;UBERON:0004921,5.14e-16,118;UBERON:0002530,6.55e-15,59;UBERON:0002417,1.19e-14,60;UBERON:0000916,1.19e-14,60;UBERON:0001007,8.03e-13,145;UBERON:0001555,8.03e-13,145;UBERON:0007026,8.03e-13,145;UBERON:0000160,9.49e-13,17;UBERON:0004119,1.66e-11,160;UBERON:0000925,1.66e-11,160;UBERON:0006595,1.66e-11,160;UBERON:0005911,1.58e-10,82;UBERON:0001041,7.01e-10,87;UBERON:0005409,6.54e-09,25;UBERON:0005177,2.10e-08,101;UBERON:0011216,9.19e-08,223;UBERON:0009569,1.68e-07,112;UBERON:0003914,3.79e-07,117;UBERON:0005256,8.03e-07,122 | |||
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|short_description=p16@APOB | |short_description=p16@APOB | ||
}} | }} |
Latest revision as of 23:01, 19 September 2015
Short description: | p16@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -443bp_to_M12413_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.80e-43 | 12 |
endodermal cell | 1.11e-08 | 58 |