FFCP PHASE1:Hg19::chr14:24732738..24732753,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:24732738..24732753,-
|short_description=p3@TGM1
|description=CAGE_peak_3_at_TGM1_5end
|association_with_transcript=0bp_to_ENST00000558074,ENST00000560226_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7051 | |EntrezGene=7051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11777 | |HGNC=11777 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558074,ENST00000560226_5end | |||
|cluster_id=chr14:24732738..24732753,- | |||
|coexpression_cluster_id=C683 | |||
|description=CAGE_peak_3_at_TGM1_5end | |||
|id=chr14:24732738..24732753,- | |||
|ontology_enrichment_celltype=CL:0002076!8.00e-13!43;CL:0000223!1.76e-11!59;CL:0000066!8.25e-11!254;CL:0000039!7.20e-10!7;CL:0000586!7.20e-10!7;CL:0002368!2.27e-09!13;CL:0000150!6.03e-08!9;CL:0000349!6.34e-08!3;CL:0002577!6.34e-08!3;CL:0002623!1.37e-07!3;CL:0002328!1.94e-07!3;CL:0000622!2.18e-07!5;CL:0002159!4.50e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002577;4.94e-17;3!CL:0002623;1.74e-16;3!CL:0000575;3.01e-12;2!CL:0000622;4.26e-10;5!CL:0002202;2.56e-09;9!CL:0002632;2.56e-09;9!CL:0000154;1.72e-08;6!CL:0002328;6.95e-08;3!CL:0002076;7.12e-08;42!CL:0000307;1.09e-07;3!CL:0002252;5.43e-07;1!CL:0000349;9.03e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,4.95e-17,3;CL:0002623,3.21e-16,3;CL:0000575,3.18e-12,2;CL:0002076,1.34e-10,42;CL:0000223,1.76e-10,58;CL:0000622,6.11e-10,5;CL:0002202,2.93e-09,9;CL:0002632,2.93e-09,9;CL:0000154,2.32e-08,6;CL:0002328,6.72e-08,3;CL:0000066,1.12e-07,253;CL:0000068,1.39e-07,3;CL:0000069,1.39e-07,3;CL:0000307,1.39e-07,3;CL:0000377,1.39e-07,3;CL:0002252,5.13e-07,1;CL:0000349,8.26e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000377;1.09e-07;3!UBERON:0009143;4.58e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!2.64e-14!7;UBERON:0005631!1.49e-13!14;UBERON:0000158!1.49e-13!14;UBERON:0001987!1.99e-09!4;UBERON:0004340!1.99e-09!4;UBERON:0000166!1.19e-08!21;UBERON:0004119!1.51e-08!169;UBERON:0000925!1.51e-08!169;UBERON:0006595!1.51e-08!169;UBERON:0004923!1.93e-08!57;UBERON:0005795!1.03e-07!22;UBERON:0001004!1.09e-07!72;UBERON:0004815!1.94e-07!3;UBERON:0002031!1.94e-07!3;UBERON:0000165!4.44e-07!28;UBERON:0000930!4.44e-07!28;UBERON:0000077!5.06e-07!130;UBERON:0000478!5.71e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;6.62e-13;4!UBERON:0001041;1.57e-09;14!UBERON:0001043;1.54e-08;3!UBERON:0000165;1.66e-08;28!UBERON:0001044;1.72e-08;6!UBERON:0003293;1.72e-08;6!UBERON:0003294;1.72e-08;6!UBERON:0010047;1.72e-08;6!UBERON:0003408;1.72e-08;6!UBERON:0000167;1.72e-08;6!UBERON:0001723;2.35e-08;3!UBERON:0001033;2.35e-08;3!UBERON:0007196;2.36e-08;15!UBERON:0001558;2.36e-08;15!UBERON:0004815;6.95e-08;3!UBERON:0002031;6.95e-08;3!UBERON:0007811;1.90e-07;52!UBERON:0000033;2.82e-07;50!UBERON:0003126;4.75e-07;7!UBERON:0001005;4.75e-07;7!UBERON:0002372;6.42e-07;1!UBERON:0001961;6.42e-07;1!UBERON:0001744;6.42e-07;1!UBERON:0001042;6.42e-07;1!UBERON:0001735;6.42e-07;1!UBERON:0000153;6.98e-07;54!UBERON:0000161;9.09e-07;19!UBERON:0000166;9.09e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,6.63e-13,4;UBERON:0004340,6.63e-13,4;UBERON:0004119,4.57e-11,160;UBERON:0000925,4.57e-11,160;UBERON:0006595,4.57e-11,160;UBERON:0000166,5.70e-11,22;UBERON:0001041,1.92e-10,87;UBERON:0005631,2.45e-09,14;UBERON:0000158,2.45e-09,14;UBERON:0001444,3.84e-09,49;UBERON:0004921,3.87e-09,118;UBERON:0001043,1.49e-08,3;UBERON:0009143,1.49e-08,3;UBERON:0000153,2.27e-08,62;UBERON:0007811,2.27e-08,62;UBERON:0001044,2.32e-08,6;UBERON:0003293,2.32e-08,6;UBERON:0003294,2.32e-08,6;UBERON:0010047,2.32e-08,6;UBERON:0000167,2.32e-08,6;UBERON:0001723,2.57e-08,3;UBERON:0001033,2.57e-08,3;UBERON:0010056,2.57e-08,3;UBERON:0007196,2.64e-08,15;UBERON:0001558,2.64e-08,15;UBERON:0000161,2.69e-08,36;UBERON:0000165,4.18e-08,29;UBERON:0000930,4.18e-08,29;UBERON:0004815,6.72e-08,3;UBERON:0002031,6.72e-08,3;UBERON:0001007,8.79e-08,145;UBERON:0001555,8.79e-08,145;UBERON:0007026,8.79e-08,145;UBERON:0000033,8.90e-08,56;UBERON:0001004,9.19e-08,74;UBERON:0003124,1.45e-07,7;UBERON:0003126,5.64e-07,7;UBERON:0001005,5.64e-07,7;UBERON:0002372,6.08e-07,1;UBERON:0001961,6.08e-07,1;UBERON:0001744,6.08e-07,1;UBERON:0001735,6.08e-07,1 | |||
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| ||
|short_description=p3@TGM1 | |||
}} | }} |
Latest revision as of 14:13, 19 September 2015
Short description: | p3@TGM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TGM1_5end |
Coexpression cluster: | C683_esophagus_tongue_tonsil_Corneal_cervical_Esophageal_throat |
Association with transcript: | 0bp_to_ENST00000558074, ENST00000560226_5end |
EntrezGene: | TGM1 |
HGNC: | 11777 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 4.95e-17 | 3 |
acinar cell of salivary gland | 3.21e-16 | 3 |
corneal epithelial cell | 3.18e-12 | 2 |
endo-epithelial cell | 1.34e-10 | 42 |
endodermal cell | 1.76e-10 | 58 |
acinar cell | 6.11e-10 | 5 |
epithelial cell of tracheobronchial tree | 2.93e-09 | 9 |
epithelial cell of lower respiratory tract | 2.93e-09 | 9 |
protein secreting cell | 2.32e-08 | 6 |
bronchial epithelial cell | 6.72e-08 | 3 |
epithelial cell | 1.12e-07 | 253 |
duct epithelial cell | 1.39e-07 | 3 |
branched duct epithelial cell | 1.39e-07 | 3 |
tracheal epithelial cell | 1.39e-07 | 3 |
tracheoblast | 1.39e-07 | 3 |
epithelial cell of esophagus | 5.13e-07 | 1 |
extraembryonic cell | 8.26e-07 | 19 |