FFCP PHASE1:Hg19::chr2:201242699..201242710,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26010 | |EntrezGene=26010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24574 | |HGNC=24574 | ||
|TSSclassifier=strong | |||
|UniProt=C9JKE4 | |UniProt=C9JKE4 | ||
|association_with_transcript=-17bp_to_ENST00000421573_5end | |association_with_transcript=-17bp_to_ENST00000421573_5end | ||
|cluster_id=chr2:201242699..201242710,+ | |||
|coexpression_cluster_id=C1048 | |||
|description=CAGE_peak_23_at_SPATS2L_5end | |description=CAGE_peak_23_at_SPATS2L_5end | ||
|id=chr2:201242699..201242710,+ | |id=chr2:201242699..201242710,+ | ||
|ontology_enrichment_celltype=CL:0002178!5.80e-08!3 | |ontology_enrichment_celltype=CL:0002178!5.80e-08!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!7.13e-12!2;DOID:4929!7.52e-12!2 | |ontology_enrichment_disease=DOID:3493!7.13e-12!2;DOID:4929!7.52e-12!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.85e-12;2!DOID:4929;3.06e-12;2!DOID:3119;3.44e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.85e-12,2;DOID:4929,2.59e-12,2;DOID:3119,3.44e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005409!2.78e-19!35;UBERON:0000160!2.58e-14!27;UBERON:0002294!3.90e-12!7;UBERON:0001173!3.90e-12!7;UBERON:0004912!3.90e-12!7;UBERON:0004921!2.23e-10!129;UBERON:0004185!2.23e-10!129;UBERON:0001007!3.50e-10!155;UBERON:0001555!3.50e-10!155;UBERON:0007026!3.50e-10!155;UBERON:0002108!5.69e-09!14;UBERON:0004119!5.70e-09!169;UBERON:0000925!5.70e-09!169;UBERON:0006595!5.70e-09!169;UBERON:0002110!6.21e-08!3;UBERON:0006242!6.21e-08!3;UBERON:0004913!7.35e-07!1;UBERON:0003703!7.35e-07!1;UBERON:0001174!7.35e-07!1;UBERON:0004914!7.35e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.17e-70;4!UBERON:0005409;1.55e-60;22!UBERON:0000160;2.20e-59;17!UBERON:0004921;2.97e-36;33!UBERON:0002114;4.17e-30;2!UBERON:0004913;4.59e-23;1!UBERON:0003703;4.59e-23;1!UBERON:0001174;4.59e-23;1!UBERON:0004914;4.59e-23;1!UBERON:0000059;1.21e-18;11!UBERON:0001555;2.38e-14;54!UBERON:0001155;8.37e-11;9!UBERON:0001007;3.66e-08;81!UBERON:0001052;9.36e-07;4!UBERON:0002394;9.36e-07;4!UBERON:0003928;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.81e-70,4;UBERON:0000160,2.11e-59,17;UBERON:0005409,1.44e-53,25;UBERON:0002114,3.59e-30,2;UBERON:0004913,3.28e-23,1;UBERON:0003703,3.28e-23,1;UBERON:0001174,3.28e-23,1;UBERON:0004914,3.28e-23,1;UBERON:0000059,1.24e-18,11;UBERON:0004921,1.22e-11,118;UBERON:0001155,7.96e-11,9;UBERON:0001007,1.94e-09,145;UBERON:0001555,1.94e-09,145;UBERON:0007026,1.94e-09,145;UBERON:0004119,1.57e-08,160;UBERON:0000925,1.57e-08,160;UBERON:0006595,1.57e-08,160 | |||
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|short_description=p23@SPATS2L | |short_description=p23@SPATS2L | ||
}} | }} |
Latest revision as of 10:19, 19 September 2015
Short description: | p23@SPATS2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_SPATS2L_5end |
Coexpression cluster: | C1048_signet_small_colon_duodenum_temporal_trachea_gall |
Association with transcript: | -17bp_to_ENST00000421573_5end |
EntrezGene: | SPATS2L |
HGNC: | 24574 |
UniProt: | C9JKE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.81e-70 | 4 |
intestine | 2.11e-59 | 17 |
gastrointestinal system | 1.44e-53 | 25 |
duodenum | 3.59e-30 | 2 |
hepatopancreatic ampulla | 3.28e-23 | 1 |
extrahepatic bile duct | 3.28e-23 | 1 |
common bile duct | 3.28e-23 | 1 |
duodenal papilla | 3.28e-23 | 1 |
large intestine | 1.24e-18 | 11 |
subdivision of digestive tract | 1.22e-11 | 118 |
colon | 7.96e-11 | 9 |
digestive system | 1.94e-09 | 145 |
digestive tract | 1.94e-09 | 145 |
primitive gut | 1.94e-09 | 145 |
endoderm-derived structure | 1.57e-08 | 160 |
endoderm | 1.57e-08 | 160 |
presumptive endoderm | 1.57e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.85e-12 | 2 |
tubular adenocarcinoma | 2.59e-12 | 2 |
gastrointestinal system cancer | 3.44e-07 | 14 |