FFCP PHASE1:Hg19::chr7:45956182..45956271,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-437bp_to_BX640961_5end | |association_with_transcript=-437bp_to_BX640961_5end | ||
|cluster_id=chr7:45956182..45956271,- | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_5_at_IGFBP3_5end | |description=CAGE_peak_5_at_IGFBP3_5end | ||
|id=chr7:45956182..45956271,- | |id=chr7:45956182..45956271,- | ||
|ontology_enrichment_celltype=CL:0000055!3.59e-11!180;CL:0000359!2.32e-09!32;CL:0000680!8.74e-08!57;CL:0000056!8.74e-08!57;CL:0000355!8.74e-08!57;CL:0000192!2.00e-07!42;CL:0000514!2.00e-07!42;CL:0000057!6.12e-07!75;CL:0000153!9.87e-07!9;CL:0000447!9.87e-07!9 | |ontology_enrichment_celltype=CL:0000055!3.59e-11!180;CL:0000359!2.32e-09!32;CL:0000680!8.74e-08!57;CL:0000056!8.74e-08!57;CL:0000355!8.74e-08!57;CL:0000192!2.00e-07!42;CL:0000514!2.00e-07!42;CL:0000057!6.12e-07!75;CL:0000153!9.87e-07!9;CL:0000447!9.87e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.11e-12;23!CL:0000153;4.85e-09;9!CL:0000447;4.85e-09;9!CL:0002595;5.61e-08;5!CL:0000327;7.74e-08;15!CL:0000138;1.13e-07;6!CL:0000349;2.17e-07;19!CL:0000499;4.24e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.36e-12,23;CL:0000057,2.56e-12,76;CL:0000153,4.89e-09,9;CL:0000447,4.89e-09,9;CL:0002595,5.85e-08,5;CL:0000327,8.33e-08,15;CL:0000058,1.15e-07,6;CL:0000138,1.15e-07,6;CL:0000349,2.73e-07,19;CL:0000499,4.36e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;9.53e-09;5!DOID:450;9.53e-09;5!DOID:66;9.53e-09;5!DOID:423;9.53e-09;5!DOID:0080000;9.53e-09;5!DOID:11722;9.53e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.00e-08,5;DOID:450,1.00e-08,5;DOID:66,1.00e-08,5;DOID:423,1.00e-08,5;DOID:0080000,1.00e-08,5;DOID:11722,1.00e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002385!4.48e-09!63;UBERON:0001015!4.48e-09!63;UBERON:0000383!4.48e-09!63;UBERON:0001134!7.60e-09!61;UBERON:0002036!7.60e-09!61;UBERON:0003082!7.60e-09!61;UBERON:0002100!1.23e-08!216;UBERON:0004290!6.87e-08!70;UBERON:0000486!1.21e-07!82;UBERON:0001637!3.82e-07!42;UBERON:0003509!3.82e-07!42;UBERON:0004572!3.82e-07!42;UBERON:0000914!7.99e-07!83;UBERON:0002329!7.99e-07!83;UBERON:0003077!7.99e-07!83;UBERON:0003059!7.99e-07!83;UBERON:0007282!7.99e-07!83;UBERON:0009618!7.99e-07!83;UBERON:0007285!7.99e-07!83;UBERON:0005256!8.00e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.55e-10;9!UBERON:0000042;2.55e-10;9!UBERON:0002097;3.34e-09;41!UBERON:0003688;4.11e-09;6!UBERON:0002358;4.11e-09;6!UBERON:0003684;4.11e-09;6!UBERON:0001178;4.11e-09;6!UBERON:0003834;5.61e-08;5!UBERON:0001533;5.61e-08;5!UBERON:0002199;6.29e-08;46!UBERON:0002416;6.29e-08;46!UBERON:0005631;4.61e-07;10!UBERON:0000158;4.61e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,6.07e-11,46;UBERON:0002416,6.07e-11,46;UBERON:0002097,8.09e-11,41;UBERON:0005631,3.62e-09,14;UBERON:0000158,3.62e-09,14;UBERON:0003688,3.82e-09,6;UBERON:0002358,3.82e-09,6;UBERON:0003684,3.82e-09,6;UBERON:0001178,3.82e-09,6;UBERON:0003834,5.85e-08,5;UBERON:0001533,5.85e-08,5;UBERON:0003124,2.61e-07,7;UBERON:0004457,2.63e-07,12;UBERON:0000042,2.63e-07,12;UBERON:0004923,5.49e-07,66 | |||
|phase1_expression=5.08699461957559,3.21150785836475,5.21531295155093,11.0080628188443,2.23480547213644,8.72338524100369,0,0,1.04474251279935,0.982935746006035,0,0,0.263766978228454,0.123766352960047,0.662794751455832,0.672325146451775,0,0.730310090387373,0.975865597581014,0.123121058076788,0,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,1.2786256184353,108.43174571537,74.6993486847475,69.3814825822346,6.36228757640879,48.176852159961,0,0.221729397462564,0.87834785693126,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.886413581652058,0.397227542439656,2.0078563452417,1.06400514659507,5.04609840128076,2.1349799145941,1.97334038733728,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0.877955241761676,1.5324389789951,0.901428353439581,0.567160915800105,7.5343646989322,7.47450860864986,15.0471649823289,14.4043726120513,6.80146692973697,8.75977836155139,8.00302482225836,2.70042131586026,4.18979122193154,15.9033277773792,12.5187862153527,0,22.0105947360301,10.2767140192193,2.37384829234683,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0,0,0,1.56449532329816,1.92972281457866,1.38134921352481,0,0,0.118306800039844,0,0,0.441175890929576,0.435758888184812,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0.821860859650752,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,3.05172048183296,0.07333828582095,0.517086863031111,3.57656445851882,0,0.531876233169741,2.08014873822732,0,0,0,0,1.08524321078289,0,0,0,0,0.904318131178758,0.871533458600294,0.299918973546171,0,0,0,0.718874566474748,5.7430967917057,1.42636905040718,4.92256442669769,3.08214483825575,5.01370697071708,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.613457458595699,0,0.542530047399471,4.78332981520856,4.10386674233472,1.89242898040722,1.63997980989798,0,2.27407504055985,3.10419213877515,0.664225598535437,1.84369168541703,0,0.195801157462741,0,0,0,0,1.5156378572313,0,4.23346410661552,5.45837177201309,2.14846762603287,5.89386198309454,3.84417447767103,11.7692667285342,3.37793234401576,0,0,1.9531789784444,0.328508624055237,0,1.85936605535935,0,0.40101294060657,0,0.918515585316854,0,0.262248829918848,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,1.54227252690289,0.270946437543853,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,0.9273691048295,0,0,0,0,1.6068392984416,0.386682873168488,0,0.15350367472613,0,0,0,0.0852266274161009,0.445160178233687,0,0,0.127612712494584,0.30347334256665,1.85938219718914,7.55549632393536,0,0.616067160352178,0,0.869932992075073,6.67167188774112,15.743737541619,0.372158369359667,0.949138274156178,0.571890581771475,0,0,0,3.92474320099615,0,0.274537029736055,0.117812402345686,0.808729926293264,9.5106192703805,0.842516912477962,0.48763373908959,3.1682753652067,3.16950440270266,0.136499911407986,0.141405431953713,4.52032466480971,2.75682671773062,21.8934861829602,23.6763478037032,0,0,1.21746226177622,1.54911749049875,0.563391205064483,0,0,0.35667105148125,0,10.5553817648832,5.26871828735843,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0.439524537815682,0.121360521749513,0,0,8.11731248108146,7.7210817016486,10.1363031692747,0,0,0.222617410045812,0,0,1.19548792950642,0.276283915531148,0,0,0,48.8332152629038,0.0898683511473268,0.716084698702437,0,0.493217028184668,0,1.11136990144637,0,0.185536196323703,0,0,0.0874599999961957,0.724999575434793,0,0,3.54581522651905,0,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0.41827123283581,1.00035336054936,0,0.69169171316418,0,0,14.6740533476683,1.19076871422421,26.6517388009317,0,0,0,0,0,0,0,0,0,1.63232808159148,0,0,0,0.353830258013357,2.4441205797345,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0.277349346026277,2.77695581336209,1.07791637155815,0.522355239482415,0.17472666824203,4.47163684426203,0.0967563312890851,0,0.164230914106418,0.581934098930517,0.0882561266915003,0,0,0,0,0.782205530939212,0.160317640503067,0,7.79257477370308,0,0,0.171594997861965,0,0,0,0.271808412147228,0.523014231561666,1.73396969981747,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0.223171457441873,0.604651252380536,13.6913955746113,0,0,0,0,0.393709926058995,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.157363764404994,0,2.86859742932552,0.383830394638891,0,0.662091970365432,3.5597595271665,9.23099322981312,1.72844298240254,1.30634944043764,0,0,0.340776043570843,0.226624183040251,1.02586563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| ||
|short_description=p5@IGFBP3 | |short_description=p5@IGFBP3 | ||
}} | }} |
Latest revision as of 19:50, 18 September 2015
Short description: | p5@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | -437bp_to_BX640961_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.36e-12 | 23 |
fibroblast | 2.56e-12 | 76 |
GAG secreting cell | 4.89e-09 | 9 |
carbohydrate secreting cell | 4.89e-09 | 9 |
smooth muscle cell of the subclavian artery | 5.85e-08 | 5 |
extracellular matrix secreting cell | 8.33e-08 | 15 |
chondroblast | 1.15e-07 | 6 |
chondrocyte | 1.15e-07 | 6 |
extraembryonic cell | 2.73e-07 | 19 |
stromal cell | 4.36e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
integument | 6.07e-11 | 46 |
integumental system | 6.07e-11 | 46 |
skin of body | 8.09e-11 | 41 |
extraembryonic membrane | 3.62e-09 | 14 |
membranous layer | 3.62e-09 | 14 |
omentum | 3.82e-09 | 6 |
peritoneum | 3.82e-09 | 6 |
abdominal cavity | 3.82e-09 | 6 |
visceral peritoneum | 3.82e-09 | 6 |
thoracic segment blood vessel | 5.85e-08 | 5 |
subclavian artery | 5.85e-08 | 5 |
chorion | 2.61e-07 | 7 |
cavity lining | 2.63e-07 | 12 |
serous membrane | 2.63e-07 | 12 |
organ component layer | 5.49e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.00e-08 | 5 |
myotonic disease | 1.00e-08 | 5 |
muscle tissue disease | 1.00e-08 | 5 |
myopathy | 1.00e-08 | 5 |
muscular disease | 1.00e-08 | 5 |
myotonic dystrophy | 1.00e-08 | 5 |