FFCP PHASE1:Hg19::chr13:25338297..25338335,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:25338297..25338335,+
|short_description=p1@RNF17
|description=CAGE_peak_1_at_RNF17_5end
|association_with_transcript=0bp_to_ENST00000381921,ENST0000042904...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56163 | |EntrezGene=56163 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10060 | |HGNC=10060 | ||
|TSSclassifier=strong | |||
|UniProt=F8WAM9,B7Z7S1,Q9BXT8 | |UniProt=F8WAM9,B7Z7S1,Q9BXT8 | ||
|association_with_transcript=0bp_to_ENST00000381921,ENST00000429047,NM_001184993,NM_031277,uc001upq.1,uc001upr.2,uc001ups.2,uc010aab.2,uc010tdd.1,uc010tde.1_5end | |||
|cluster_id=chr13:25338297..25338335,+ | |||
|description=CAGE_peak_1_at_RNF17_5end | |||
|id=chr13:25338297..25338335,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.57e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;4.69e-07;1!DOID:3165;4.69e-07;1!DOID:0060121;4.69e-07;1!DOID:2438;4.69e-07;1!DOID:4418;4.69e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,4.69e-07,1;DOID:3165,4.69e-07,1;DOID:0060121,4.69e-07,1;DOID:2438,4.69e-07,1;DOID:4418,4.69e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.85e-17!115;UBERON:0001049!5.87e-14!57;UBERON:0005068!5.87e-14!57;UBERON:0006241!5.87e-14!57;UBERON:0007135!5.87e-14!57;UBERON:0003075!6.50e-14!86;UBERON:0007284!6.50e-14!86;UBERON:0002346!7.17e-13!90;UBERON:0002616!5.97e-12!59;UBERON:0005743!1.24e-11!86;UBERON:0001017!1.37e-11!82;UBERON:0002780!1.92e-11!41;UBERON:0001890!1.92e-11!41;UBERON:0006240!1.92e-11!41;UBERON:0003080!4.79e-11!42;UBERON:0002791!1.12e-10!33;UBERON:0000073!1.12e-10!94;UBERON:0001016!1.12e-10!94;UBERON:0003056!1.46e-10!61;UBERON:0002020!2.08e-10!34;UBERON:0003528!2.08e-10!34;UBERON:0001893!3.07e-10!34;UBERON:0000955!5.18e-09!69;UBERON:0006238!5.18e-09!69;UBERON:0001869!1.65e-08!32;UBERON:0000956!9.47e-08!25;UBERON:0000203!9.47e-08!25;UBERON:0002619!9.70e-08!22;UBERON:0001950!3.52e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.98e-08;11!UBERON:0002114;3.94e-08;2!UBERON:0001282;3.72e-07;1!UBERON:0009842;3.72e-07;1!UBERON:0003704;3.72e-07;1!UBERON:0001171;3.72e-07;1!UBERON:0001172;3.72e-07;1!UBERON:0000473;4.14e-07;8!UBERON:0007195;5.11e-07;1!UBERON:0000941;5.57e-07;1!UBERON:0001785;5.57e-07;1!UBERON:0002464;5.57e-07;1!UBERON:0004904;5.57e-07;1!UBERON:0001021;5.57e-07;1!UBERON:0005795;6.79e-07;1!UBERON:0001389;6.79e-07;1!UBERON:0000026;6.79e-07;1!UBERON:0008784;6.79e-07;1!UBERON:0006058;6.79e-07;1!UBERON:0003663;6.79e-07;1!UBERON:0004256;6.79e-07;1!UBERON:0004708;6.79e-07;1!UBERON:0002101;6.79e-07;1!UBERON:0004709;6.79e-07;1!UBERON:0002529;6.79e-07;1!UBERON:0010538;6.79e-07;1!UBERON:0003661;6.79e-07;1!UBERON:0010890;6.79e-07;1!UBERON:0002471;6.79e-07;1!UBERON:0001383;6.79e-07;1!UBERON:0010758;6.79e-07;1!UBERON:0010707;6.79e-07;1!UBERON:0000978;6.79e-07;1!UBERON:0002103;6.79e-07;1!UBERON:0001665;6.79e-07;1!UBERON:0003823;6.79e-07;1!UBERON:0000154;6.79e-07;1!UBERON:0010709;6.79e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.82e-08,11;UBERON:0002114,4.23e-08,2;UBERON:0001282,3.73e-07,1;UBERON:0009842,3.73e-07,1;UBERON:0003704,3.73e-07,1;UBERON:0001171,3.73e-07,1;UBERON:0001172,3.73e-07,1;UBERON:0000473,4.14e-07,8;UBERON:0007195,5.26e-07,1;UBERON:0000941,5.57e-07,1;UBERON:0001785,5.57e-07,1;UBERON:0002464,5.57e-07,1;UBERON:0004904,5.57e-07,1;UBERON:0001021,5.57e-07,1;UBERON:0003902,5.57e-07,1;UBERON:0005425,5.57e-07,1;UBERON:0005418,6.60e-07,1;UBERON:0001389,6.60e-07,1;UBERON:0000026,6.60e-07,1;UBERON:0008784,6.60e-07,1;UBERON:0006058,6.60e-07,1;UBERON:0003663,6.60e-07,1;UBERON:0004256,6.60e-07,1;UBERON:0004708,6.60e-07,1;UBERON:0002101,6.60e-07,1;UBERON:0004709,6.60e-07,1;UBERON:0002529,6.60e-07,1;UBERON:0010538,6.60e-07,1;UBERON:0003661,6.60e-07,1;UBERON:0010890,6.60e-07,1;UBERON:0002471,6.60e-07,1;UBERON:0001383,6.60e-07,1;UBERON:0004357,6.60e-07,1;UBERON:0004347,6.60e-07,1;UBERON:0005420,6.60e-07,1;UBERON:0005732,6.60e-07,1;UBERON:0010758,6.60e-07,1;UBERON:0010707,6.60e-07,1;UBERON:0000978,6.60e-07,1;UBERON:0002103,6.60e-07,1;UBERON:0001665,6.60e-07,1;UBERON:0003823,6.60e-07,1;UBERON:0000154,6.60e-07,1;UBERON:0010709,6.60e-07,1;UBERON:0005733,6.60e-07,1;UBERON:0005730,6.60e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0.65156653411535,1.21079900526674,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0.527008714158756,17.1582588902004,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,11.3603069605317,4.33234022378853,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26082723657489,0,0,0,0,0,0,1.15295962733569,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.460385919864187,0.280660094433074,0.512556597022804,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,1.13345112812495,0,0,0,0,0,0.096670718292122,0,0,0,0,0.580066775656914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717056761020258,0.294747123039363,0,0,0,0,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,0,0,0,0,4.6785135102055,0,0,0.334330152832435,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0,0.622079175323615,0,0,0,0.591860433821602,0,11.1136990144637,0,0,0,0,0,0,0,16.272233618737,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.438770794307945,0,0,0.153900517007594,18.3446709913672,0,0,0,2.87101043758728,0,0,0,0,0,0.451191321234361,0.392125068635479,0.503464760927528,0.37950746544837,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0.468528891450678,0,0,0,0,0,2.44858209304392,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0,14.5264440125556,13.5125935958033,0.759729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.681017030557878,0.160753148465019,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0.554645257684261,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,5.65094895634227,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,1.43670473151436,0,0.252071696221718,0,0,9.99385941814081,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,1.03343398250592,0.19024743058172,0,0,0,0,0,0,0,0,0.455324382702595,2.30626162422861,0,0,0.271878931907327,0.394636641377094,0,0,1.41287567130925,0,0,0,2.80705868584208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53200186031526,0,0,0,0,0,0,0,0,63.8572828287029,0.231522474323834,0,0,0,0,0,2.37637120261669,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,1.37618785021362,1.43339583151451,0,0.0679914901909147,2.18175345170189,2.645134202577,0,0,0,0,0,0,0,0,0,21.3101408398519,49.5592686347286,54.9326466820166,0,0.930896962757057,0,0,0,0.248298857183432,0.784923038064294,0,1.0105859447911,0,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,4.06896178315738,0,0,0 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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0.65156653411535,1.21079900526674,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0.527008714158756,17.1582588902004,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,11.3603069605317,4.33234022378853,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26082723657489,0,0,0,0,0,0,1.15295962733569,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.460385919864187,0.280660094433074,0.512556597022804,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,1.13345112812495,0,0,0,0,0,0.096670718292122,0,0,0,0,0.580066775656914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717056761020258,0.294747123039363,0,0,0,0,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,0,0,0,0,4.6785135102055,0,0,0.334330152832435,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0,0.622079175323615,0,0,0,0.591860433821602,0,11.1136990144637,0,0,0,0,0,0,0,16.272233618737,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.438770794307945,0,0,0.153900517007594,18.3446709913672,0,0,0,2.87101043758728,0,0,0,0,0,0.451191321234361,0.392125068635479,0.503464760927528,0.37950746544837,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0.468528891450678,0,0,0,0,0,2.44858209304392,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0,14.5264440125556,13.5125935958033,0.759729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.681017030557878,0.160753148465019,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0.554645257684261,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,5.65094895634227,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,1.43670473151436,0,0.252071696221718,0,0,9.99385941814081,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,1.03343398250592,0.19024743058172,0,0,0,0,0,0,0,0,0.455324382702595,2.30626162422861,0,0,0.271878931907327,0.394636641377094,0,0,1.41287567130925,0,0,0,2.80705868584208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53200186031526,0,0,0,0,0,0,0,0,63.8572828287029,0.231522474323834,0,0,0,0,0,2.37637120261669,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,1.37618785021362,1.43339583151451,0,0.0679914901909147,2.18175345170189,2.645134202577,0,0,0,0,0,0,0,0,0,21.3101408398519,49.5592686347286,54.9326466820166,0,0.930896962757057,0,0,0,0.248298857183432,0.784923038064294,0,1.0105859447911,0,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,4.06896178315738,0,0,0 | ||
|short_description=p1@RNF17 | |||
}} | }} |
Latest revision as of 21:35, 16 September 2015
Short description: | p1@RNF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNF17_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000381921, ENST00000429047, NM_001184993, NM_031277, uc001upq.1, uc001upr.2, uc001ups.2, uc010aab.2, uc010tdd.1, uc010tde.1_5end |
EntrezGene: | RNF17 |
HGNC: | 10060 |
UniProt: | F8WAM9B7Z7S1Q9BXT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 4.69e-07 | 1 |
skin benign neoplasm | 4.69e-07 | 1 |
integumentary system benign neoplasm | 4.69e-07 | 1 |
dermis tumor | 4.69e-07 | 1 |
cutaneous fibrous histiocytoma | 4.69e-07 | 1 |