FFCP PHASE1:Hg19::chr13:23368290..23368299,+: Difference between revisions
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|id=chr13:23368290..23368299,+
|short_description=p@chr13:23368290..23368299,+
|description=CAGE_peak_at_chr13:23368290..23368299,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:23368290..23368299,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr13:23368290..23368299,+ | |||
|id=chr13:23368290..23368299,+ | |||
|ontology_enrichment_celltype=CL:0002178!5.54e-08!3;CL:0002231!7.26e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000138;7.67e-18;6!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.67e-18,6;CL:0000138,7.67e-18,6;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!1.53e-21!1;DOID:4549!1.53e-21!1;DOID:5861!1.53e-21!1;DOID:6496!1.53e-21!1;DOID:0050619!4.22e-21!1;DOID:1357!4.22e-21!1;DOID:3119!1.60e-13!14;DOID:4929!2.02e-11!2;DOID:3493!2.47e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:3371;9.37e-99;1!DOID:4549;9.37e-99;1!DOID:5861;9.37e-99;1!DOID:6496;9.37e-99;1!DOID:4929;4.52e-50;2!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6!DOID:3119;2.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.37e-99,1;DOID:4549,9.37e-99,1;DOID:5861,9.37e-99,1;DOID:6496,9.37e-99,1;DOID:4929,4.52e-50,2;DOID:201,7.67e-18,6;DOID:0060100,7.67e-18,6;DOID:3119,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004913!1.88e-21!1;UBERON:0003703!1.88e-21!1;UBERON:0001174!1.88e-21!1;UBERON:0004914!1.88e-21!1;UBERON:0001764!4.22e-21!1;UBERON:0001825!4.22e-21!1;UBERON:0000945!5.98e-11!8;UBERON:0010039!5.98e-11!8;UBERON:0002418!4.52e-08!3;UBERON:0004755!4.52e-08!3;UBERON:0001896!8.29e-08!3;UBERON:0005290!8.29e-08!3;UBERON:0010096!8.29e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.55e-98;1!UBERON:0003703;2.55e-98;1!UBERON:0001174;2.55e-98;1!UBERON:0004914;2.55e-98;1!UBERON:0002418;4.27e-34;3!UBERON:0004755;4.27e-34;3!UBERON:0002114;5.96e-34;2!UBERON:0002394;7.14e-26;4!UBERON:0003928;7.14e-26;4!UBERON:0002108;5.15e-21;4!UBERON:0002294;1.91e-15;7!UBERON:0001173;1.91e-15;7!UBERON:0000058;3.02e-11;10!UBERON:0001474;7.18e-07;18!UBERON:0000160;7.60e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.55e-98,1;UBERON:0003703,2.55e-98,1;UBERON:0001174,2.55e-98,1;UBERON:0004914,2.55e-98,1;UBERON:0002418,4.27e-34,3;UBERON:0004755,4.27e-34,3;UBERON:0002114,5.96e-34,2;UBERON:0002108,5.15e-21,4;UBERON:0002394,9.07e-18,6;UBERON:0003928,9.07e-18,6;UBERON:0002294,2.45e-12,9;UBERON:0001173,2.45e-12,9;UBERON:0004912,2.45e-12,9;UBERON:0000160,7.60e-07,17 | |||
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|short_description=p@chr13:23368290..23368299,+ | |||
}} | }} |
Latest revision as of 15:05, 24 July 2015
Short description: | p@chr13:23368290..23368299, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:23368290..23368299, + |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.67e-18 | 6 |
chondrocyte | 7.67e-18 | 6 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.55e-98 | 1 |
extrahepatic bile duct | 2.55e-98 | 1 |
common bile duct | 2.55e-98 | 1 |
duodenal papilla | 2.55e-98 | 1 |
cartilage tissue | 4.27e-34 | 3 |
skeletal tissue | 4.27e-34 | 3 |
duodenum | 5.96e-34 | 2 |
small intestine | 5.15e-21 | 4 |
bile duct | 9.07e-18 | 6 |
digestive system duct | 9.07e-18 | 6 |
biliary system | 2.45e-12 | 9 |
biliary tree | 2.45e-12 | 9 |
biliary bud | 2.45e-12 | 9 |
intestine | 7.60e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.37e-99 | 1 |
extraosseous chondrosarcoma | 9.37e-99 | 1 |
myxoid chondrosarcoma | 9.37e-99 | 1 |
extraskeletal myxoid chondrosarcoma | 9.37e-99 | 1 |
tubular adenocarcinoma | 4.52e-50 | 2 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |
gastrointestinal system cancer | 2.00e-08 | 14 |