FFCP PHASE1:Hg19::chr20:43029911..43029912,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3172 | |EntrezGene=3172 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5024 | |HGNC=5024 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBS7 | |UniProt=F8WBS7 | ||
|association_with_transcript=1bp_to_ENST00000372920_5end | |association_with_transcript=1bp_to_ENST00000372920_5end | ||
|cluster_id=chr20:43029911..43029912,+ | |||
|coexpression_cluster_id=C304 | |||
|description=CAGE_peak_6_at_HNF4A_5end | |description=CAGE_peak_6_at_HNF4A_5end | ||
|id=chr20:43029911..43029912,+ | |id=chr20:43029911..43029912,+ | ||
|ontology_enrichment_celltype=CL:0000181!6.35e-17!12;CL:0000417!6.35e-17!12;CL:0000668!6.35e-17!12;CL:0000414!6.35e-17!12;CL:0000412!6.35e-17!12;CL:0000182!6.35e-17!12;CL:0002563!1.04e-08!4;CL:0000223!1.23e-07!59 | |ontology_enrichment_celltype=CL:0000181!6.35e-17!12;CL:0000417!6.35e-17!12;CL:0000668!6.35e-17!12;CL:0000414!6.35e-17!12;CL:0000412!6.35e-17!12;CL:0000182!6.35e-17!12;CL:0002563!1.04e-08!4;CL:0000223!1.23e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.03e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.13e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.14e-24;11!UBERON:0009497;2.47e-20;13!UBERON:0001041;3.09e-09;30!UBERON:0003104;3.09e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;2.68e-24;19!UBERON:0006925;2.68e-24;19!UBERON:0002108;1.61e-23;4!UBERON:0002423;1.28e-18;25!UBERON:0002365;5.61e-15;31!UBERON:0002330;5.61e-15;31!UBERON:0000160;7.70e-15;17!UBERON:0005409;8.88e-12;22!UBERON:0002368;1.65e-11;33!UBERON:0002114;9.43e-11;2!UBERON:0001007;1.94e-10;81!UBERON:0000949;2.50e-09;43!UBERON:0001052;2.18e-08;4!UBERON:0004921;2.16e-07;33!UBERON:0004907;5.86e-07;5 | |||
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|short_description=p6@HNF4A | |short_description=p6@HNF4A | ||
}} | }} |
Latest revision as of 07:58, 16 September 2015
Short description: | p6@HNF4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HNF4A_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | 1bp_to_ENST00000372920_5end |
EntrezGene: | HNF4A |
HGNC: | 5024 |
UniProt: | F8WBS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.13e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.12e-24 | 19 |
digestive gland | 3.12e-24 | 19 |
liver bud | 3.12e-24 | 19 |
small intestine | 1.61e-23 | 4 |
hepatic diverticulum | 5.12e-21 | 22 |
liver primordium | 5.12e-21 | 22 |
digestive tract diverticulum | 3.94e-20 | 23 |
epithelial sac | 1.43e-18 | 25 |
epithelium of foregut-midgut junction | 1.43e-18 | 25 |
anatomical boundary | 1.43e-18 | 25 |
hepatobiliary system | 1.43e-18 | 25 |
foregut-midgut junction | 1.43e-18 | 25 |
septum transversum | 1.43e-18 | 25 |
sac | 7.03e-18 | 26 |
exocrine gland | 4.33e-15 | 31 |
exocrine system | 4.33e-15 | 31 |
intestine | 6.84e-15 | 17 |
endocrine gland | 1.99e-13 | 35 |
subdivision of digestive tract | 7.31e-12 | 118 |
duodenum | 9.90e-11 | 2 |
endocrine system | 1.48e-10 | 45 |
gastrointestinal system | 1.55e-10 | 25 |
digestive system | 1.06e-09 | 145 |
digestive tract | 1.06e-09 | 145 |
primitive gut | 1.06e-09 | 145 |
gut epithelium | 7.12e-09 | 54 |
abdomen element | 7.12e-09 | 54 |
abdominal segment element | 7.12e-09 | 54 |
endoderm-derived structure | 8.31e-09 | 160 |
endoderm | 8.31e-09 | 160 |
presumptive endoderm | 8.31e-09 | 160 |
rectum | 1.82e-08 | 4 |
gland | 3.70e-08 | 59 |
abdominal segment of trunk | 4.98e-08 | 60 |
abdomen | 4.98e-08 | 60 |
lower digestive tract | 5.08e-07 | 5 |