FFCP PHASE1:Hg19::chr6:167684810..167684828,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54346 | |EntrezGene=54346 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12570 | |HGNC=12570 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFH7 | |UniProt=D6RFH7 | ||
|association_with_transcript=153bp_to_ENST00000503433_5end | |association_with_transcript=153bp_to_ENST00000503433_5end | ||
|cluster_id=chr6:167684810..167684828,+ | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_2_at_UNC93A_5end | |description=CAGE_peak_2_at_UNC93A_5end | ||
|id=chr6:167684810..167684828,+ | |id=chr6:167684810..167684828,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.06e-31!7;CL:0000586!1.06e-31!7;CL:0002322!5.38e-09!5;CL:0002178!2.44e-07!3 | |ontology_enrichment_celltype=CL:0000039!1.06e-31!7;CL:0000586!1.06e-31!7;CL:0002322!5.38e-09!5;CL:0002178!2.44e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.92e-15;4!CL:0002322;3.54e-12;5!CL:0000039;4.85e-09;7!CL:0000586;4.85e-09;7!CL:0002253;1.61e-08;2!CL:0002076;1.52e-07;42!CL:0002251;4.07e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.92e-15,4;CL:0002322,4.20e-12,5;CL:0000039,4.95e-09,7;CL:0000586,4.95e-09,7;CL:0000223,1.11e-08,58;CL:0002076,1.42e-08,42;CL:0002253,1.61e-08,2;CL:0002251,4.07e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.38e-15;1 | |||
|ontology_enrichment_disease=DOID:3095!3.39e-12!22;DOID:2994!3.39e-12!22 | |||
|ontology_enrichment_disease_v019=DOID:3119;6.94e-10;14!DOID:299;2.07e-09;25!DOID:3493;1.20e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.04e-10,14;DOID:299,1.89e-09,25;DOID:3493,1.20e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001052!9.98e-12!4;UBERON:0003135!1.66e-10!11;UBERON:0000473!1.23e-09!8;UBERON:0004907!1.82e-09!5;UBERON:0005409!4.10e-09!35;UBERON:0004921!1.67e-07!129;UBERON:0004185!1.67e-07!129;UBERON:0001042!2.13e-07!10;UBERON:0009145!2.13e-07!10;UBERON:0000160!2.17e-07!27;UBERON:0000991!2.22e-07!21;UBERON:0009196!2.22e-07!21;UBERON:0009117!2.22e-07!21;UBERON:0005564!2.22e-07!21;UBERON:0003101!3.39e-07!22;UBERON:0000079!3.39e-07!22;UBERON:0000059!4.50e-07!11;UBERON:0004176!5.12e-07!22;UBERON:0006562!9.92e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.73e-32;4!UBERON:0004907;3.77e-26;5!UBERON:0005409;1.30e-15;22!UBERON:0001242;1.92e-15;4!UBERON:0001262;1.92e-15;4!UBERON:0004786;1.92e-15;4!UBERON:0004808;1.92e-15;4!UBERON:0001277;1.92e-15;4!UBERON:0004921;5.27e-14;33!UBERON:0000160;5.18e-13;17!UBERON:0000059;2.96e-12;11!UBERON:0000485;3.17e-09;7!UBERON:0003929;3.17e-09;7!UBERON:0003350;3.51e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.47e-32,4;UBERON:0004907,3.32e-26,5;UBERON:0001242,1.92e-15,4;UBERON:0001262,1.92e-15,4;UBERON:0004786,1.92e-15,4;UBERON:0004808,1.92e-15,4;UBERON:0001277,1.92e-15,4;UBERON:0005409,7.82e-14,25;UBERON:0000160,4.94e-13,17;UBERON:0001046,2.38e-12,19;UBERON:0000059,2.79e-12,11;UBERON:0003350,3.51e-08,8;UBERON:0000485,2.29e-07,9;UBERON:0004921,5.54e-07,118 | |||
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|short_description=p2@UNC93A | |short_description=p2@UNC93A | ||
}} | }} |
Latest revision as of 21:31, 16 September 2015
Short description: | p2@UNC93A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UNC93A_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | 153bp_to_ENST00000503433_5end |
EntrezGene: | UNC93A |
HGNC: | 12570 |
UniProt: | D6RFH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.92e-15 | 4 |
embryonic stem cell | 4.20e-12 | 5 |
germ line cell | 4.95e-09 | 7 |
germ cell | 4.95e-09 | 7 |
endodermal cell | 1.11e-08 | 58 |
endo-epithelial cell | 1.42e-08 | 42 |
epithelial cell of large intestine | 1.61e-08 | 2 |
epithelial cell of alimentary canal | 4.07e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.47e-32 | 4 |
lower digestive tract | 3.32e-26 | 5 |
intestinal mucosa | 1.92e-15 | 4 |
wall of intestine | 1.92e-15 | 4 |
gastrointestinal system mucosa | 1.92e-15 | 4 |
gastrointestinal system epithelium | 1.92e-15 | 4 |
intestinal epithelium | 1.92e-15 | 4 |
gastrointestinal system | 7.82e-14 | 25 |
intestine | 4.94e-13 | 17 |
hindgut | 2.38e-12 | 19 |
large intestine | 2.79e-12 | 11 |
epithelium of mucosa | 3.51e-08 | 8 |
simple columnar epithelium | 2.29e-07 | 9 |
subdivision of digestive tract | 5.54e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.04e-10 | 14 |
adenocarcinoma | 1.89e-09 | 25 |
signet ring cell adenocarcinoma | 1.20e-08 | 2 |