FFCP PHASE1:Hg19::chr13:102142215..102142233,+: Difference between revisions
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|id=chr13:102142215..102142233,+
|short_description=p10@ITGBL1
|description=CAGE_peak_10_at_ITGBL1_5end
|association_with_transcript=-69bp_to_ENST00000376162_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9358 | |EntrezGene=9358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6164 | |HGNC=6164 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQ02 | |UniProt=B4DQ02 | ||
|association_with_transcript=-69bp_to_ENST00000376162_5end | |||
|cluster_id=chr13:102142215..102142233,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_10_at_ITGBL1_5end | |||
|id=chr13:102142215..102142233,+ | |||
|ontology_enrichment_celltype=CL:0002139!9.80e-29!24;CL:0000213!3.73e-25!57;CL:0000215!3.73e-25!57;CL:0000115!2.69e-21!35;CL:0000071!5.56e-21!18;CL:0002546!5.56e-21!18;CL:0000076!3.13e-20!62;CL:0002078!2.10e-18!44;CL:0002618!2.62e-11!3;CL:0002144!4.20e-11!3;CL:0002541!1.10e-10!3;CL:0002150!3.22e-10!3;CL:0000861!3.22e-10!3;CL:0000222!5.36e-10!119;CL:0002543!1.81e-09!6;CL:0002544!2.10e-09!6;CL:0005020!2.45e-09!6;CL:0002138!2.45e-09!6;CL:0005022!2.45e-09!6;CL:0000066!2.75e-09!254;CL:0002545!8.59e-08!2;CL:0000077!3.09e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002144;4.60e-23;3!CL:0002618;7.19e-23;3!CL:0002139;2.59e-17;24!CL:0000071;5.10e-15;18!CL:0002543;6.00e-12;6!CL:0000115;2.66e-10;36!CL:0002535;1.71e-09;2!CL:0002078;9.46e-09;45!CL:0002541;9.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,5.15e-23,3;CL:0002618,7.20e-23,3;CL:0002139,2.64e-17,24;CL:0000115,2.32e-16,36;CL:0000071,5.29e-15,18;CL:0002546,5.29e-15,18;CL:0002078,4.64e-13,45;CL:0002543,6.00e-12,6;CL:0000213,4.33e-10,58;CL:0000215,4.33e-10,58;CL:0002535,1.57e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002546;5.10e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.22e-17;1!DOID:0060061;1.22e-17;1!DOID:8691;1.22e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.22e-17,1;DOID:0060061,1.22e-17,1;DOID:8691,1.22e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!5.56e-21!18;UBERON:0004638!5.56e-21!18;UBERON:0004852!5.56e-21!18;UBERON:0000487!1.05e-16!22;UBERON:0006914!2.13e-14!25;UBERON:0001915!4.20e-11!3;UBERON:0001982!4.20e-11!3;UBERON:0001009!4.36e-11!113;UBERON:0000476!1.10e-10!3;UBERON:0000920!1.10e-10!3;UBERON:0000055!5.93e-10!69;UBERON:0004535!2.51e-09!110;UBERON:0002049!2.72e-09!79;UBERON:0007798!2.72e-09!79;UBERON:0000478!8.51e-08!24;UBERON:0005800!8.59e-08!2;UBERON:0001515!8.59e-08!2;UBERON:0001473!5.39e-07!8;UBERON:0004536!5.39e-07!8;UBERON:0006558!5.39e-07!8;UBERON:0002066!6.40e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;4.60e-23;3!UBERON:0001915;4.60e-23;3!UBERON:0001982;4.60e-23;3!UBERON:0002331;8.03e-16;10!UBERON:0004638;5.10e-15;18!UBERON:0001986;5.10e-15;18!UBERON:0004852;5.10e-15;18!UBERON:0002066;3.84e-14;5!UBERON:0000487;2.37e-12;22!UBERON:0000478;1.74e-11;24!UBERON:0006914;6.58e-11;25!UBERON:0000178;9.29e-11;15!UBERON:0000179;9.29e-11;15!UBERON:0000463;9.29e-11;15!UBERON:0006955;1.71e-09;2!UBERON:0004801;1.71e-09;2!UBERON:0001638;2.85e-08;9!UBERON:0010260;2.85e-08;9!UBERON:0003920;2.85e-08;9!UBERON:0004582;2.85e-08;9!UBERON:0000490;1.07e-07;33!UBERON:0003124;9.64e-07;3!UBERON:0000920;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,5.15e-23,3;UBERON:0001915,5.15e-23,3;UBERON:0001982,5.15e-23,3;UBERON:0002331,8.23e-16,10;UBERON:0000358,8.23e-16,10;UBERON:0000307,8.23e-16,10;UBERON:0000091,8.23e-16,10;UBERON:0000087,8.23e-16,10;UBERON:0007010,8.23e-16,10;UBERON:0007806,8.23e-16,10;UBERON:0008780,8.23e-16,10;UBERON:0005728,8.23e-16,10;UBERON:0004638,5.29e-15,18;UBERON:0001986,5.29e-15,18;UBERON:0004852,5.29e-15,18;UBERON:0002066,3.84e-14,5;UBERON:0000487,2.44e-12,22;UBERON:0000478,1.86e-11,24;UBERON:0006914,6.75e-11,25;UBERON:0000178,9.44e-11,15;UBERON:0000179,9.44e-11,15;UBERON:0000463,9.44e-11,15;UBERON:0006955,1.57e-09,2;UBERON:0004801,1.57e-09,2;UBERON:0004535,3.18e-09,109;UBERON:0001009,5.85e-09,112;UBERON:0001638,2.85e-08,9;UBERON:0010260,2.85e-08,9;UBERON:0003920,2.85e-08,9;UBERON:0004582,2.85e-08,9 | |||
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| ||
|short_description=p10@ITGBL1 | |||
}} | }} |
Latest revision as of 08:45, 16 September 2015
Short description: | p10@ITGBL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ITGBL1_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -69bp_to_ENST00000376162_5end |
EntrezGene: | ITGBL1 |
HGNC: | 6164 |
UniProt: | B4DQ02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 5.15e-23 | 3 |
endothelial cell of umbilical vein | 7.20e-23 | 3 |
endothelial cell of vascular tree | 2.64e-17 | 24 |
endothelial cell | 2.32e-16 | 36 |
blood vessel endothelial cell | 5.29e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.29e-15 | 18 |
meso-epithelial cell | 4.64e-13 | 45 |
vein endothelial cell | 6.00e-12 | 6 |
lining cell | 4.33e-10 | 58 |
barrier cell | 4.33e-10 | 58 |
epithelial cell of cervix | 1.57e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 5.15e-23 | 3 |
endothelium of capillary | 5.15e-23 | 3 |
capillary | 5.15e-23 | 3 |
umbilical cord | 8.23e-16 | 10 |
blastocyst | 8.23e-16 | 10 |
blastula | 8.23e-16 | 10 |
bilaminar disc | 8.23e-16 | 10 |
inner cell mass | 8.23e-16 | 10 |
cleaving embryo | 8.23e-16 | 10 |
connecting stalk | 8.23e-16 | 10 |
inner cell mass derived epiblast | 8.23e-16 | 10 |
extraembryonic mesoderm | 8.23e-16 | 10 |
blood vessel endothelium | 5.29e-15 | 18 |
endothelium | 5.29e-15 | 18 |
cardiovascular system endothelium | 5.29e-15 | 18 |
umbilical vein | 3.84e-14 | 5 |
simple squamous epithelium | 2.44e-12 | 22 |
extraembryonic structure | 1.86e-11 | 24 |
squamous epithelium | 6.75e-11 | 25 |
blood | 9.44e-11 | 15 |
haemolymphatic fluid | 9.44e-11 | 15 |
organism substance | 9.44e-11 | 15 |
uterine epithelium | 1.57e-09 | 2 |
cervix epithelium | 1.57e-09 | 2 |
cardiovascular system | 3.18e-09 | 109 |
circulatory system | 5.85e-09 | 112 |
vein | 2.85e-08 | 9 |
umbilical blood vessel | 2.85e-08 | 9 |
venous blood vessel | 2.85e-08 | 9 |
venous system | 2.85e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.22e-17 | 1 |
cutaneous T cell lymphoma | 1.22e-17 | 1 |
mycosis fungoides | 1.22e-17 | 1 |