FFCP PHASE1:Hg19::chr1:21996247..21996270,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5909 | |EntrezGene=5909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9858 | |HGNC=9858 | ||
|TSSclassifier=strong | |||
|UniProt=P47736 | |UniProt=P47736 | ||
|association_with_transcript=-391bp_to_ENST00000542643,NM_001145657,NM_002885,uc001bex.2,uc001bey.2_5end | |association_with_transcript=-391bp_to_ENST00000542643,NM_001145657,NM_002885,uc001bex.2,uc001bey.2_5end | ||
|cluster_id=chr1:21996247..21996270,- | |||
|coexpression_cluster_id=C576 | |||
|description=CAGE_peak_6_at_RAP1GAP_5end | |description=CAGE_peak_6_at_RAP1GAP_5end | ||
|id=chr1:21996247..21996270,- | |id=chr1:21996247..21996270,- | ||
|ontology_enrichment_celltype=CL:0000181!5.90e-09!12;CL:0000417!5.90e-09!12;CL:0000668!5.90e-09!12;CL:0000414!5.90e-09!12;CL:0000412!5.90e-09!12;CL:0000182!5.90e-09!12;CL:0000569!7.79e-07!4;CL:0000011!7.79e-07!4 | |ontology_enrichment_celltype=CL:0000181!5.90e-09!12;CL:0000417!5.90e-09!12;CL:0000668!5.90e-09!12;CL:0000414!5.90e-09!12;CL:0000412!5.90e-09!12;CL:0000182!5.90e-09!12;CL:0000569!7.79e-07!4;CL:0000011!7.79e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.38e-28;12!CL:0000840;3.16e-20;5!CL:0000990;1.04e-13;8!CL:0000451;2.51e-11;10!CL:0002535;5.01e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.34e-28,12;CL:0000840,2.42e-20,5;CL:0001029,2.42e-20,5;CL:0000990,8.77e-14,8;CL:0000451,2.18e-11,10;CL:0002535,4.69e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.15e-30;11!UBERON:0009497;9.73e-26;13!UBERON:0003104;2.45e-15;31!UBERON:0001041;3.62e-11;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-09!115;UBERON:0001049!1.64e-09!57;UBERON:0005068!1.64e-09!57;UBERON:0006241!1.64e-09!57;UBERON:0007135!1.64e-09!57;UBERON:0002107!2.16e-09!19;UBERON:0006925!2.16e-09!19;UBERON:0008836!2.16e-09!19;UBERON:0002791!6.42e-09!33;UBERON:0002020!1.36e-08!34;UBERON:0003528!1.36e-08!34;UBERON:0001893!1.36e-08!34;UBERON:0009497!1.55e-08!25;UBERON:0000015!1.55e-08!25;UBERON:0002423!1.55e-08!25;UBERON:0006235!1.55e-08!25;UBERON:0004161!1.55e-08!25;UBERON:0002780!4.15e-08!41;UBERON:0001890!4.15e-08!41;UBERON:0006240!4.15e-08!41;UBERON:0005057!5.11e-08!26;UBERON:0008835!6.69e-08!22;UBERON:0003894!6.69e-08!22;UBERON:0003080!7.41e-08!42;UBERON:0002616!7.79e-08!59;UBERON:0002420!8.21e-08!9;UBERON:0007245!8.21e-08!9;UBERON:0010009!8.21e-08!9;UBERON:0010011!8.21e-08!9;UBERON:0000454!8.21e-08!9;UBERON:0001869!1.02e-07!32;UBERON:0009854!1.72e-07!23;UBERON:0000369!3.59e-07!4;UBERON:0002435!3.59e-07!4;UBERON:0000204!3.59e-07!4;UBERON:0010082!3.59e-07!4;UBERON:0000955!5.50e-07!69;UBERON:0006238!5.50e-07!69;UBERON:0001950!7.71e-07!20;UBERON:0007499!8.97e-07!25;UBERON:0009663!9.73e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.88e-34;19!UBERON:0006925;6.88e-34;19!UBERON:0002423;1.15e-25;25!UBERON:0002365;1.20e-19;31!UBERON:0002330;1.20e-19;31!UBERON:0002368;4.22e-17;33!UBERON:0000949;1.06e-12;43!UBERON:0005172;3.49e-10;52!UBERON:0005173;3.49e-10;52!UBERON:0006955;5.01e-08;2!UBERON:0004801;5.01e-08;2!UBERON:0002417;3.20e-07;58!UBERON:0000916;3.20e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.80e-34,19;UBERON:0006925,8.80e-34,19;UBERON:0008836,8.80e-34,19;UBERON:0008835,3.99e-29,22;UBERON:0003894,3.99e-29,22;UBERON:0009854,7.66e-28,23;UBERON:0007499,1.39e-25,25;UBERON:0009497,1.39e-25,25;UBERON:0000015,1.39e-25,25;UBERON:0002423,1.39e-25,25;UBERON:0006235,1.39e-25,25;UBERON:0004161,1.39e-25,25;UBERON:0009856,1.39e-24,26;UBERON:0002365,1.51e-20,31;UBERON:0002330,1.51e-20,31;UBERON:0002368,3.79e-18,35;UBERON:0005172,4.53e-15,54;UBERON:0005173,4.53e-15,54;UBERON:0000949,5.26e-14,45;UBERON:0002417,1.72e-13,60;UBERON:0000916,1.72e-13,60;UBERON:0003929,1.39e-11,54;UBERON:0002530,1.49e-10,59;UBERON:0006955,4.69e-08,2;UBERON:0004801,4.69e-08,2;UBERON:0005177,1.08e-07,101;UBERON:0005911,1.98e-07,82;UBERON:0001041,5.75e-07,87;UBERON:0009569,7.46e-07,112 | |||
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| ||
|short_description=p6@RAP1GAP | |short_description=p6@RAP1GAP | ||
}} | }} |
Latest revision as of 06:08, 25 September 2015
Short description: | p6@RAP1GAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RAP1GAP_5end |
Coexpression cluster: | C576_Hepatocyte_hepatocellular_liver_Intestinal_mature_breast_Prostate |
Association with transcript: | -391bp_to_ENST00000542643, NM_001145657, NM_002885, uc001bex.2, uc001bey.2_5end |
EntrezGene: | RAP1GAP |
HGNC: | 9858 |
UniProt: | P47736 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.34e-28 | 12 |
immature conventional dendritic cell | 2.42e-20 | 5 |
common dendritic progenitor | 2.42e-20 | 5 |
conventional dendritic cell | 8.77e-14 | 8 |
dendritic cell | 2.18e-11 | 10 |
epithelial cell of cervix | 4.69e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 8.80e-34 | 19 |
digestive gland | 8.80e-34 | 19 |
liver bud | 8.80e-34 | 19 |
hepatic diverticulum | 3.99e-29 | 22 |
liver primordium | 3.99e-29 | 22 |
digestive tract diverticulum | 7.66e-28 | 23 |
epithelial sac | 1.39e-25 | 25 |
epithelium of foregut-midgut junction | 1.39e-25 | 25 |
anatomical boundary | 1.39e-25 | 25 |
hepatobiliary system | 1.39e-25 | 25 |
foregut-midgut junction | 1.39e-25 | 25 |
septum transversum | 1.39e-25 | 25 |
sac | 1.39e-24 | 26 |
exocrine gland | 1.51e-20 | 31 |
exocrine system | 1.51e-20 | 31 |
endocrine gland | 3.79e-18 | 35 |
abdomen element | 4.53e-15 | 54 |
abdominal segment element | 4.53e-15 | 54 |
endocrine system | 5.26e-14 | 45 |
abdominal segment of trunk | 1.72e-13 | 60 |
abdomen | 1.72e-13 | 60 |
gut epithelium | 1.39e-11 | 54 |
gland | 1.49e-10 | 59 |
uterine epithelium | 4.69e-08 | 2 |
cervix epithelium | 4.69e-08 | 2 |
trunk region element | 1.08e-07 | 101 |
endo-epithelium | 1.98e-07 | 82 |
foregut | 5.75e-07 | 87 |
subdivision of trunk | 7.46e-07 | 112 |