FFCP PHASE1:Hg19::chr4:57547751..57547764,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84525 | |EntrezGene=84525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24961 | |HGNC=24961 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BPY8,G3V294,G3V469,E9PB55 | |UniProt=Q9BPY8,G3V294,G3V469,E9PB55 | ||
|association_with_transcript=107bp_to_ENST00000420433,ENST00000554144,ENST00000557328,NM_001145460,NM_032495,NM_139212,uc003hca.2,uc003hcb.2,uc003hcc.2,uc003hcd.2,uc003hce.2_5end | |association_with_transcript=107bp_to_ENST00000420433,ENST00000554144,ENST00000557328,NM_001145460,NM_032495,NM_139212,uc003hca.2,uc003hcb.2,uc003hcc.2,uc003hcd.2,uc003hce.2_5end | ||
|cluster_id=chr4:57547751..57547764,- | |||
|coexpression_cluster_id=C1942 | |||
|description=CAGE_peak_6_at_HOPX_5end | |description=CAGE_peak_6_at_HOPX_5end | ||
|id=chr4:57547751..57547764,- | |id=chr4:57547751..57547764,- | ||
|ontology_enrichment_celltype=CL:0002605!1.03e-07!3;CL:0000047!3.43e-07!8 | |ontology_enrichment_celltype=CL:0002605!1.03e-07!3;CL:0000047!3.43e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002605;3.60e-12;3!CL:0000047;4.83e-09;2!CL:0002319;8.00e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.54e-12,3;CL:0000047,5.66e-12,8;CL:0002319,8.20e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.31e-16;82!UBERON:0006241;2.06e-12;3!UBERON:0003057;2.06e-12;3!UBERON:0006215;5.98e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;9.38e-75;32!UBERON:0000956;1.70e-73;25!UBERON:0000203;1.70e-73;25!UBERON:0003528;1.87e-72;34!UBERON:0002020;1.87e-72;34!UBERON:0002791;2.87e-70;32!UBERON:0001893;1.49e-69;34!UBERON:0002619;6.27e-63;22!UBERON:0000073;2.04e-59;53!UBERON:0002616;2.04e-59;53!UBERON:0002780;2.02e-58;41!UBERON:0001890;2.02e-58;41!UBERON:0001950;3.21e-56;20!UBERON:0001017;2.87e-43;75!UBERON:0000955;5.29e-42;68!UBERON:0001016;1.85e-35;83!UBERON:0004733;6.44e-23;12!UBERON:0002028;6.44e-23;12!UBERON:0002298;6.43e-22;6!UBERON:0004732;5.06e-21;13!UBERON:0001871;2.16e-18;6!UBERON:0000349;4.79e-18;5!UBERON:0002021;2.91e-17;5!UBERON:0001872;3.06e-17;5!UBERON:0000200;6.02e-15;6!UBERON:0000125;2.56e-14;9!UBERON:0002308;2.56e-14;9!UBERON:0002420;5.22e-14;9!UBERON:0007245;5.22e-14;9!UBERON:0010009;5.22e-14;9!UBERON:0010011;5.22e-14;9!UBERON:0000454;5.22e-14;9!UBERON:0002680;7.65e-14;9!UBERON:0001895;7.65e-14;9!UBERON:0002784;1.72e-13;4!UBERON:0011216;2.64e-13;132!UBERON:0002240;2.06e-12;3!UBERON:0005174;2.06e-12;3!UBERON:0001137;2.06e-12;3!UBERON:0007023;2.20e-12;114!UBERON:0000988;7.00e-12;3!UBERON:0001896;8.87e-12;3!UBERON:0005290;8.87e-12;3!UBERON:0002148;7.07e-09;2!UBERON:0006331;7.07e-09;2!UBERON:0009662;7.07e-09;2!UBERON:0000369;7.34e-09;4!UBERON:0002435;7.34e-09;4!UBERON:0000204;7.34e-09;4!UBERON:0010314;1.66e-08;132!UBERON:0002771;1.90e-08;2!UBERON:0009663;2.06e-08;7!UBERON:0001876;2.20e-08;2!UBERON:0001954;2.33e-08;2!UBERON:0003022;2.33e-08;2!UBERON:0002421;2.33e-08;2!UBERON:0002600;2.33e-08;2!UBERON:0001894;9.34e-08;7!UBERON:0001897;9.57e-08;2!UBERON:0010225;9.57e-08;2!UBERON:0001905;2.01e-07;2!UBERON:0002757;2.01e-07;2!UBERON:0010134;2.01e-07;2!UBERON:0005408;2.01e-07;2!UBERON:0001899;2.01e-07;2 | |||
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| ||
|short_description=p6@HOPX | |short_description=p6@HOPX | ||
}} | }} |
Latest revision as of 03:01, 18 September 2015
Short description: | p6@HOPX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HOPX_5end |
Coexpression cluster: | C1942_Neural_spinal_Astrocyte_Neurons_caudate_locus_medial |
Association with transcript: | 107bp_to_ENST00000420433, ENST00000554144, ENST00000557328, NM_001145460, NM_032495, NM_139212, uc003hca.2, uc003hcb.2, uc003hcc.2, uc003hcd.2, uc003hce.2_5end |
EntrezGene: | HOPX |
HGNC: | 24961 |
UniProt: | Q9BPY8G3V294G3V469E9PB55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.54e-12 | 3 |
neuronal stem cell | 5.66e-12 | 8 |
neural cell | 8.20e-08 | 25 |