FFCP PHASE1:Hg19::chr1:167059674..167059697,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10223 | |EntrezGene=10223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4445 | |HGNC=4445 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMB2 | |UniProt=E9PMB2 | ||
|association_with_transcript=-111bp_to_ENST00000534512_5end | |association_with_transcript=-111bp_to_ENST00000534512_5end | ||
|cluster_id=chr1:167059674..167059697,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_3_at_GPA33_5end | |description=CAGE_peak_3_at_GPA33_5end | ||
|id=chr1:167059674..167059697,- | |id=chr1:167059674..167059697,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;7.72e-21;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!2.64e-31!11;UBERON:0000160!7.33e-27!27;UBERON:0005409!2.42e-25!35;UBERON:0004907!7.88e-18!5;UBERON:0001155!1.16e-17!9;UBERON:0001154!5.57e-11!1;UBERON:0001153!5.57e-11!1;UBERON:0001052!1.62e-10!4;UBERON:0004921!3.02e-07!129;UBERON:0004185!3.02e-07!129;UBERON:0001007!6.06e-07!155;UBERON:0001555!6.06e-07!155;UBERON:0007026!6.06e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.15e-69;17!UBERON:0005409;1.59e-54;22!UBERON:0000059;6.44e-45;11!UBERON:0002108;2.55e-36;4!UBERON:0001155;1.25e-35;9!UBERON:0004921;1.14e-31;33!UBERON:0001154;7.72e-21;1!UBERON:0001153;7.72e-21;1!UBERON:0009854;7.72e-21;1!UBERON:0004907;1.42e-16;5!UBERON:0001555;1.62e-12;54!UBERON:0001007;7.43e-09;81!UBERON:0002114;6.34e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.15e-69,17;UBERON:0005409,3.13e-48,25;UBERON:0000059,6.44e-45,11;UBERON:0002108,2.55e-36,4;UBERON:0001155,1.25e-35,9;UBERON:0001154,7.72e-21,1;UBERON:0001153,7.72e-21,1;UBERON:0001045,7.72e-21,1;UBERON:0004907,1.42e-16,5;UBERON:0004921,2.47e-10,118;UBERON:0001007,2.42e-08,145;UBERON:0001555,2.42e-08,145;UBERON:0007026,2.42e-08,145;UBERON:0002114,6.34e-08,2;UBERON:0004119,1.60e-07,160;UBERON:0000925,1.60e-07,160;UBERON:0006595,1.60e-07,160 | |||
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|short_description=p3@GPA33 | |short_description=p3@GPA33 | ||
}} | }} |
Latest revision as of 10:48, 18 September 2015
Short description: | p3@GPA33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPA33_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -111bp_to_ENST00000534512_5end |
EntrezGene: | GPA33 |
HGNC: | 4445 |
UniProt: | E9PMB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.15e-69 | 17 |
gastrointestinal system | 3.13e-48 | 25 |
large intestine | 6.44e-45 | 11 |
small intestine | 2.55e-36 | 4 |
colon | 1.25e-35 | 9 |
vermiform appendix | 7.72e-21 | 1 |
caecum | 7.72e-21 | 1 |
midgut | 7.72e-21 | 1 |
lower digestive tract | 1.42e-16 | 5 |
subdivision of digestive tract | 2.47e-10 | 118 |
digestive system | 2.42e-08 | 145 |
digestive tract | 2.42e-08 | 145 |
primitive gut | 2.42e-08 | 145 |
duodenum | 6.34e-08 | 2 |
endoderm-derived structure | 1.60e-07 | 160 |
endoderm | 1.60e-07 | 160 |
presumptive endoderm | 1.60e-07 | 160 |