FFCP PHASE1:Hg19::chr4:158141749..158141782,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2891 | |EntrezGene=2891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4572 | |HGNC=4572 | ||
|TSSclassifier=strong | |||
|UniProt=P42262 | |UniProt=P42262 | ||
|association_with_transcript=13bp_to_NM_000826,NM_001083619,uc003ipl.3,uc003ipm.3_5end | |association_with_transcript=13bp_to_NM_000826,NM_001083619,uc003ipl.3,uc003ipm.3_5end | ||
|cluster_id=chr4:158141749..158141782,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_GRIA2_5end | |description=CAGE_peak_3_at_GRIA2_5end | ||
|id=chr4:158141749..158141782,+ | |id=chr4:158141749..158141782,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.84e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.52e-22;82!UBERON:0006215;3.17e-09;3!UBERON:0006241;5.09e-08;3!UBERON:0003057;5.09e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;1.14e-61;41!UBERON:0001890;1.14e-61;41!UBERON:0003528;1.56e-59;34!UBERON:0002020;1.56e-59;34!UBERON:0001893;2.11e-59;34!UBERON:0001869;2.90e-59;32!UBERON:0002791;4.87e-59;32!UBERON:0002619;1.15e-56;22!UBERON:0000073;3.03e-56;53!UBERON:0002616;3.03e-56;53!UBERON:0001950;1.23e-51;20!UBERON:0000956;2.65e-49;25!UBERON:0000203;2.65e-49;25!UBERON:0001017;6.69e-39;75!UBERON:0000955;4.13e-38;68!UBERON:0001016;9.22e-34;83!UBERON:0002420;9.02e-23;9!UBERON:0007245;9.02e-23;9!UBERON:0010009;9.02e-23;9!UBERON:0010011;9.02e-23;9!UBERON:0000454;9.02e-23;9!UBERON:0000125;1.86e-22;9!UBERON:0002308;1.86e-22;9!UBERON:0004732;3.89e-18;13!UBERON:0009663;7.67e-18;7!UBERON:0001871;8.60e-18;6!UBERON:0001894;5.86e-17;7!UBERON:0007023;5.95e-17;114!UBERON:0000200;1.68e-16;6!UBERON:0004733;5.03e-16;12!UBERON:0002028;5.03e-16;12!UBERON:0002298;1.59e-14;6!UBERON:0000349;7.65e-14;5!UBERON:0001872;1.32e-13;5!UBERON:0011216;1.88e-13;132!UBERON:0002021;1.89e-13;5!UBERON:0000369;2.31e-11;4!UBERON:0002435;2.31e-11;4!UBERON:0000204;2.31e-11;4!UBERON:0003296;1.88e-10;4!UBERON:0010133;1.88e-10;4!UBERON:0002784;2.29e-10;4!UBERON:0002680;2.51e-10;9!UBERON:0001895;2.51e-10;9!UBERON:0001870;2.81e-09;3!UBERON:0005383;4.53e-09;3!UBERON:0005382;4.53e-09;3!UBERON:0010314;1.54e-08;132!UBERON:0000988;2.13e-08;3!UBERON:0002240;5.09e-08;3!UBERON:0005174;5.09e-08;3!UBERON:0001137;5.09e-08;3!UBERON:0001896;8.28e-08;3!UBERON:0005290;8.28e-08;3!UBERON:0002702;7.99e-07;2!UBERON:0002771;9.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.72e-108,56;UBERON:0005068,2.72e-108,56;UBERON:0006241,2.72e-108,56;UBERON:0007135,2.72e-108,56;UBERON:0000073,2.03e-101,53;UBERON:0002616,2.03e-101,53;UBERON:0001017,1.39e-99,81;UBERON:0001016,7.73e-95,89;UBERON:0002780,1.87e-86,41;UBERON:0001890,1.87e-86,41;UBERON:0003080,1.87e-86,41;UBERON:0006240,1.87e-86,41;UBERON:0000955,7.46e-86,68;UBERON:0006238,7.46e-86,68;UBERON:0003075,7.50e-76,82;UBERON:0007284,7.50e-76,82;UBERON:0002346,1.73e-74,86;UBERON:0003528,1.26e-70,34;UBERON:0002020,1.26e-70,34;UBERON:0001893,2.28e-70,34;UBERON:0001869,4.29e-66,32;UBERON:0002791,7.90e-66,32;UBERON:0010371,1.53e-61,104;UBERON:0003056,7.19e-61,61;UBERON:0002619,1.21e-56,22;UBERON:0007023,9.27e-56,114;UBERON:0001950,1.29e-51,20;UBERON:0004121,6.99e-51,171;UBERON:0000924,6.99e-51,171;UBERON:0006601,6.99e-51,171;UBERON:0000956,2.77e-49,25;UBERON:0000203,2.77e-49,25;UBERON:0010314,7.09e-44,132;UBERON:0011216,3.87e-38,223;UBERON:0000025,7.75e-28,192;UBERON:0002420,9.03e-23,9;UBERON:0007245,9.03e-23,9;UBERON:0010009,9.03e-23,9;UBERON:0010011,9.03e-23,9;UBERON:0000454,9.03e-23,9;UBERON:0000125,1.84e-22,9;UBERON:0002308,1.84e-22,9;UBERON:0003076,4.85e-22,15;UBERON:0003057,4.85e-22,15;UBERON:0004111,2.50e-20,240;UBERON:0004732,4.15e-18,13;UBERON:0009663,7.67e-18,7;UBERON:0001871,8.93e-18,6;UBERON:0001894,5.93e-17,7;UBERON:0006222,5.93e-17,7;UBERON:0000200,1.73e-16,6;UBERON:0004733,5.31e-16,12;UBERON:0002028,5.31e-16,12;UBERON:0007277,5.31e-16,12;UBERON:0000483,3.90e-15,306;UBERON:0000119,7.61e-15,309;UBERON:0002298,1.67e-14,6;UBERON:0000349,7.56e-14,5;UBERON:0001872,1.34e-13,5;UBERON:0002021,1.86e-13,5;UBERON:0000369,2.31e-11,4;UBERON:0002435,2.31e-11,4;UBERON:0000204,2.31e-11,4;UBERON:0010082,2.31e-11,4;UBERON:0003296,1.81e-10,4;UBERON:0010133,1.81e-10,4;UBERON:0002784,2.37e-10,4;UBERON:0002680,2.53e-10,9;UBERON:0001895,2.53e-10,9;UBERON:0010092,2.53e-10,9;UBERON:0001870,2.77e-09,3;UBERON:0002050,3.16e-09,564;UBERON:0005383,4.59e-09,3;UBERON:0005382,4.59e-09,3;UBERON:0000923,7.70e-09,560;UBERON:0010316,7.70e-09,560;UBERON:0005291,7.70e-09,560;UBERON:0006598,7.70e-09,560;UBERON:0010317,7.70e-09,560;UBERON:0002532,7.70e-09,560;UBERON:0000922,1.70e-08,592;UBERON:0005423,1.94e-08,581;UBERON:0000988,2.10e-08,3;UBERON:0002240,5.28e-08,3;UBERON:0005174,5.28e-08,3;UBERON:0001137,5.28e-08,3;UBERON:0001896,8.80e-08,3;UBERON:0005290,8.80e-08,3;UBERON:0010096,8.80e-08,3;UBERON:0002702,8.00e-07,2;UBERON:0002771,9.16e-07,2 | |||
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|short_description=p3@GRIA2 | |short_description=p3@GRIA2 | ||
}} | }} |
Latest revision as of 09:30, 16 September 2015
Short description: | p3@GRIA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRIA2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 13bp_to_NM_000826, NM_001083619, uc003ipl.3, uc003ipm.3_5end |
EntrezGene: | GRIA2 |
HGNC: | 4572 |
UniProt: | P42262 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.84e-07 | 8 |