FFCP PHASE1:Hg19::chr12:52885299..52885323,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:52885299..52885323,+
|short_description=p@chr12:52885299..52885323,+
|description=CAGE_peak_at_chr12:52885299..52885323,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52885299..52885323,+ | |||
|description=CAGE_peak_at_chr12:52885299..52885323,+ | |||
|id=chr12:52885299..52885323,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.17e-28!43;CL:0002159!3.77e-21!13;CL:0002368!1.26e-20!13;CL:0000223!3.50e-19!59;CL:0000066!1.02e-18!254;CL:0002251!2.11e-13!21;CL:0002077!4.95e-12!33;CL:0000244!4.99e-12!4;CL:0000731!4.99e-12!4;CL:0002202!2.14e-11!9;CL:0002632!2.14e-11!9;CL:0000349!3.94e-10!3;CL:0002577!3.94e-10!3;CL:0002328!4.71e-10!3;CL:0002166!9.53e-10!3;CL:0002621!3.09e-09!3;CL:0000068!3.77e-09!3;CL:0000069!3.77e-09!3;CL:0000307!3.77e-09!3;CL:0000377!3.77e-09!3;CL:0002541!4.22e-09!3;CL:0000362!6.20e-09!8;CL:0000622!7.08e-09!5;CL:0000240!3.10e-08!6;CL:0000311!3.10e-08!6;CL:0000079!3.10e-08!6;CL:0000237!3.10e-08!6;CL:0000036!3.10e-08!6;CL:0000357!3.10e-08!6;CL:0000114!3.10e-08!6;CL:0000154!2.12e-07!6;CL:0002327!2.25e-07!4;CL:0000575!2.54e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002368;6.43e-23;13!CL:0002159;7.85e-22;14!CL:0002076;8.19e-18;42!CL:0000349;1.20e-15;19!CL:0002202;2.65e-15;9!CL:0002632;2.65e-15;9!CL:0002577;3.35e-13;3!CL:0002328;3.79e-13;3!CL:0002166;1.14e-12;3!CL:0002621;3.98e-12;3!CL:0000307;6.95e-12;3!CL:0000240;6.94e-11;6!CL:0000311;6.94e-11;6!CL:0000079;6.94e-11;6!CL:0000237;6.94e-11;6!CL:0002077;2.13e-10;34!CL:0000244;1.26e-09;4!CL:0000731;1.26e-09;4!CL:0002327;1.30e-09;4!CL:0000575;1.96e-09;2!CL:0002536;1.82e-08;2!CL:0000312;7.09e-08;5!CL:0000362;2.89e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,6.69e-23,13;CL:0002076,1.69e-22,42;CL:0002159,8.68e-22,14;CL:0000066,5.87e-17,253;CL:0000349,1.21e-15,19;CL:0002202,2.65e-15,9;CL:0002632,2.65e-15,9;CL:0000223,3.55e-15,58;CL:0002577,3.09e-13,3;CL:0002328,3.94e-13,3;CL:0002166,1.03e-12,3;CL:0002077,5.02e-12,34;CL:0002621,5.12e-12,3;CL:0000068,6.70e-12,3;CL:0000069,6.70e-12,3;CL:0000307,6.70e-12,3;CL:0000377,6.70e-12,3;CL:0000240,6.86e-11,6;CL:0000311,6.86e-11,6;CL:0000079,6.86e-11,6;CL:0000237,6.86e-11,6;CL:0000036,6.86e-11,6;CL:0000357,6.86e-11,6;CL:0000114,6.86e-11,6;CL:0000244,1.14e-09,4;CL:0000731,1.14e-09,4;CL:0002327,1.28e-09,4;CL:0000575,2.05e-09,2;CL:0002536,2.12e-08,2;CL:0000312,7.79e-08,5;CL:0000362,3.17e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;6.95e-12;3!CL:0000357;6.94e-11;6!CL:0000114;6.94e-11;6!CL:0000223;2.03e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005631;7.82e-14;10!UBERON:0000158;7.82e-14;10!UBERON:0004815;3.79e-13;3!UBERON:0002031;3.79e-13;3!UBERON:0001949;3.98e-12;3!UBERON:0000478;4.93e-12;24!UBERON:0000486;3.22e-11;12!UBERON:0001987;5.26e-10;4!UBERON:0001911;1.30e-09;4!UBERON:0001708;1.30e-09;4!UBERON:0008895;1.30e-09;4!UBERON:0000305;2.38e-09;7!UBERON:0007196;6.39e-09;15!UBERON:0001558;6.39e-09;15!UBERON:0002185;4.76e-08;5!UBERON:0000365;8.85e-08;5!UBERON:0011159;9.06e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.66e-22,14;UBERON:0000158,7.66e-22,14;UBERON:0003124,1.66e-14,7;UBERON:0004815,3.94e-13,3;UBERON:0002031,3.94e-13,3;UBERON:0000478,4.97e-12,24;UBERON:0001949,5.12e-12,3;UBERON:0004119,4.07e-10,160;UBERON:0000925,4.07e-10,160;UBERON:0006595,4.07e-10,160;UBERON:0001987,4.95e-10,4;UBERON:0004340,4.95e-10,4;UBERON:0003102,1.09e-09,99;UBERON:0001708,1.21e-09,4;UBERON:0008895,1.21e-09,4;UBERON:0001911,1.28e-09,4;UBERON:0005333,1.28e-09,4;UBERON:0008425,1.28e-09,4;UBERON:0005311,1.28e-09,4;UBERON:0000305,2.60e-09,7;UBERON:0007196,6.39e-09,15;UBERON:0001558,6.39e-09,15;UBERON:0001004,2.32e-08,74;UBERON:0004871,3.76e-08,8;UBERON:0002185,4.87e-08,5;UBERON:0000365,8.16e-08,5;UBERON:0011159,8.55e-08,5;UBERON:0000033,1.43e-07,56;UBERON:0004923,2.69e-07,66 | |||
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| ||
|short_description=p@chr12:52885299..52885323,+ | |||
}} | }} |
Latest revision as of 09:33, 24 July 2015
Short description: | p@chr12:52885299..52885323, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52885299..52885323, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.66e-22 | 14 |
membranous layer | 7.66e-22 | 14 |
chorion | 1.66e-14 | 7 |
lower respiratory tract epithelium | 3.94e-13 | 3 |
epithelium of bronchus | 3.94e-13 | 3 |
extraembryonic structure | 4.97e-12 | 24 |
gingival epithelium | 5.12e-12 | 3 |
endoderm-derived structure | 4.07e-10 | 160 |
endoderm | 4.07e-10 | 160 |
presumptive endoderm | 4.07e-10 | 160 |
placenta | 4.95e-10 | 4 |
allantois | 4.95e-10 | 4 |
surface structure | 1.09e-09 | 99 |
jaw skeleton | 1.21e-09 | 4 |
splanchnocranium | 1.21e-09 | 4 |
mammary gland | 1.28e-09 | 4 |
mammary bud | 1.28e-09 | 4 |
mammary ridge | 1.28e-09 | 4 |
mammary placode | 1.28e-09 | 4 |
amnion | 2.60e-09 | 7 |
tracheobronchial tree | 6.39e-09 | 15 |
lower respiratory tract | 6.39e-09 | 15 |
respiratory system | 2.32e-08 | 74 |
somatic layer of lateral plate mesoderm | 3.76e-08 | 8 |
bronchus | 4.87e-08 | 5 |
urothelium | 8.16e-08 | 5 |
primary subdivision of cranial skeletal system | 8.55e-08 | 5 |
head | 1.43e-07 | 56 |
organ component layer | 2.69e-07 | 66 |