FFCP PHASE1:Hg19::chr12:52306220..52306231,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:52306220..52306231,+
|short_description=p9@ACVRL1
|description=CAGE_peak_9_at_ACVRL1_5end
|association_with_transcript=107bp_to_NM_001077401,uc001rzk.2_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=94 | |EntrezGene=94 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=175 | |HGNC=175 | ||
|TSSclassifier=strong | |||
|UniProt=P37023 | |UniProt=P37023 | ||
|association_with_transcript=107bp_to_NM_001077401,uc001rzk.2_5end | |||
|cluster_id=chr12:52306220..52306231,+ | |||
|coexpression_cluster_id=C3289 | |||
|description=CAGE_peak_9_at_ACVRL1_5end | |||
|id=chr12:52306220..52306231,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.07e-32!24;CL:0000115!4.43e-32!35;CL:0000071!4.38e-24!18;CL:0002546!4.38e-24!18;CL:0002078!1.26e-23!44;CL:0000213!3.15e-16!57;CL:0000215!3.15e-16!57;CL:0002543!1.38e-11!6;CL:1000413!5.51e-10!9;CL:0005020!7.23e-10!6;CL:0002138!7.23e-10!6;CL:0005022!7.23e-10!6;CL:0002544!4.33e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.17e-49;24!CL:0000115;6.94e-46;36!CL:0000071;5.36e-43;18!CL:0002543;1.55e-23;6!CL:0002078;5.09e-23;45!CL:1000413;2.93e-22;9!CL:0000213;3.28e-19;58!CL:0000215;3.28e-19;58!CL:0002544;2.64e-15;6!CL:0002188;3.62e-11;5!CL:0002138;7.09e-09;6!CL:0002618;3.49e-08;3!CL:1000746;4.22e-08;7!CL:1000612;4.22e-08;7!CL:0000076;3.94e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.12e-52,36;CL:0002139,1.71e-49,24;CL:0000071,4.32e-43,18;CL:0002546,4.32e-43,18;CL:0002078,2.57e-41,45;CL:0000213,3.99e-31,58;CL:0000215,3.99e-31,58;CL:0002543,1.49e-23,6;CL:1000413,2.06e-22,9;CL:0002544,2.00e-15,6;CL:0000222,9.04e-13,121;CL:0002188,3.69e-11,5;CL:0000076,1.32e-10,63;CL:0005020,1.11e-08,6;CL:0002138,1.11e-08,6;CL:0005022,1.11e-08,6;CL:0002618,4.20e-08,3;CL:1000746,4.28e-08,7;CL:1000612,4.28e-08,7 | |||
|ontology_enrichment_development_v019=CL:0002546;5.36e-43;18!CL:0005022;7.09e-09;6!UBERON:0005425;9.50e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;5.36e-43;18!UBERON:0001986;5.36e-43;18!UBERON:0004852;5.36e-43;18!UBERON:0000487;9.52e-35;22!UBERON:0006914;2.72e-30;25!UBERON:0003915;2.93e-22;9!UBERON:0004700;2.93e-22;9!UBERON:0001917;2.93e-22;9!UBERON:0000490;1.57e-20;33!UBERON:0001638;1.24e-15;9!UBERON:0003920;1.24e-15;9!UBERON:0004582;1.24e-15;9!UBERON:0007500;3.00e-10;56!UBERON:0001981;3.00e-10;56!UBERON:0004537;3.00e-10;56!UBERON:0000055;5.58e-10;65!UBERON:0000025;1.33e-08;93!UBERON:0000074;4.22e-08;7!UBERON:0001229;4.22e-08;7!UBERON:0002171;2.09e-07;1!UBERON:0006518;2.09e-07;1!UBERON:0008949;2.09e-07;1!UBERON:0000101;2.09e-07;1!UBERON:0002167;2.09e-07;1!UBERON:0003914;2.90e-07;74!UBERON:0004732;5.99e-07;13!UBERON:0001473;9.16e-07;8!UBERON:0004536;9.16e-07;8!UBERON:0006558;9.16e-07;8!UBERON:0000941;9.50e-07;1!UBERON:0001785;9.50e-07;1!UBERON:0002464;9.50e-07;1!UBERON:0004904;9.50e-07;1!UBERON:0001021;9.50e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.32e-43,18;UBERON:0001986,4.32e-43,18;UBERON:0004852,4.32e-43,18;UBERON:0000487,8.00e-35,22;UBERON:0006914,2.34e-30,25;UBERON:0003915,2.06e-22,9;UBERON:0004700,2.06e-22,9;UBERON:0001917,2.06e-22,9;UBERON:0000055,9.18e-18,68;UBERON:0000025,2.97e-17,192;UBERON:0004111,1.98e-16,240;UBERON:0001638,1.21e-15,9;UBERON:0003920,1.21e-15,9;UBERON:0004582,1.21e-15,9;UBERON:0002049,4.76e-15,78;UBERON:0007798,4.76e-15,78;UBERON:0007500,1.22e-13,59;UBERON:0001981,1.22e-13,59;UBERON:0004537,1.22e-13,59;UBERON:0006965,1.22e-13,59;UBERON:0004535,8.18e-10,109;UBERON:0000483,1.31e-09,306;UBERON:0001009,1.84e-09,112;UBERON:0000119,1.85e-09,309;UBERON:0003914,4.38e-09,117;UBERON:0004872,6.11e-09,83;UBERON:0010532,4.28e-08,7;UBERON:0000074,4.28e-08,7;UBERON:0001229,4.28e-08,7;UBERON:0001230,4.28e-08,7;UBERON:0003220,4.28e-08,7;UBERON:0005749,4.28e-08,7;UBERON:0004199,4.28e-08,7;UBERON:0004209,4.28e-08,7;UBERON:0004198,4.28e-08,7;UBERON:0002171,2.09e-07,1;UBERON:0006518,2.09e-07,1;UBERON:0008949,2.09e-07,1;UBERON:0000101,2.09e-07,1;UBERON:0002167,2.09e-07,1;UBERON:0005103,3.93e-07,8;UBERON:0000083,3.93e-07,8;UBERON:0009201,3.93e-07,8;UBERON:0006553,3.93e-07,8;UBERON:0003074,3.93e-07,8;UBERON:0003060,3.93e-07,8;UBERON:0004732,6.66e-07,13;UBERON:0000941,9.51e-07,1;UBERON:0001785,9.51e-07,1;UBERON:0002464,9.51e-07,1;UBERON:0004904,9.51e-07,1;UBERON:0001021,9.51e-07,1;UBERON:0003902,9.51e-07,1;UBERON:0005425,9.51e-07,1 | |||
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| ||
|short_description=p9@ACVRL1 | |||
}} | }} |
Latest revision as of 20:47, 18 September 2015
Short description: | p9@ACVRL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ACVRL1_5end |
Coexpression cluster: | C3289_lung_Endothelial_Renal_Hepatic_Lymphatic_adipose_breast |
Association with transcript: | 107bp_to_NM_001077401, uc001rzk.2_5end |
EntrezGene: | ACVRL1 |
HGNC: | 175 |
UniProt: | P37023 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.12e-52 | 36 |
endothelial cell of vascular tree | 1.71e-49 | 24 |
blood vessel endothelial cell | 4.32e-43 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.32e-43 | 18 |
meso-epithelial cell | 2.57e-41 | 45 |
lining cell | 3.99e-31 | 58 |
barrier cell | 3.99e-31 | 58 |
vein endothelial cell | 1.49e-23 | 6 |
endothelial cell of artery | 2.06e-22 | 9 |
aortic endothelial cell | 2.00e-15 | 6 |
mesodermal cell | 9.04e-13 | 121 |
glomerular endothelial cell | 3.69e-11 | 5 |
squamous epithelial cell | 1.32e-10 | 63 |
lymphangioblast | 1.11e-08 | 6 |
endothelial cell of lymphatic vessel | 1.11e-08 | 6 |
vascular lymphangioblast | 1.11e-08 | 6 |
endothelial cell of umbilical vein | 4.20e-08 | 3 |
glomerular cell | 4.28e-08 | 7 |
kidney corpuscule cell | 4.28e-08 | 7 |