FFCP PHASE1:Hg19::chr1:155100366..155100377,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1942 | |EntrezGene=1942 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3221 | |HGNC=3221 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000469878_5end | |association_with_transcript=2bp_to_ENST00000469878_5end | ||
|cluster_id=chr1:155100366..155100377,+ | |||
|coexpression_cluster_id=C3876 | |||
|description=CAGE_peak_2_at_EFNA1_5end | |description=CAGE_peak_2_at_EFNA1_5end | ||
|id=chr1:155100366..155100377,+ | |id=chr1:155100366..155100377,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.20e-47!254;CL:0000223!1.67e-15!59;CL:0000076!1.58e-12!62;CL:0002139!1.25e-11!24;CL:0000115!3.17e-11!35;CL:0002076!3.60e-11!43;CL:0002078!9.46e-11!44;CL:0000213!1.84e-10!57;CL:0000215!1.84e-10!57;CL:0000071!2.81e-08!18;CL:0002546!2.81e-08!18 | |ontology_enrichment_celltype=CL:0000066!7.20e-47!254;CL:0000223!1.67e-15!59;CL:0000076!1.58e-12!62;CL:0002139!1.25e-11!24;CL:0000115!3.17e-11!35;CL:0002076!3.60e-11!43;CL:0002078!9.46e-11!44;CL:0000213!1.84e-10!57;CL:0000215!1.84e-10!57;CL:0000071!2.81e-08!18;CL:0002546!2.81e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.86e-13;24!CL:0000115;3.62e-11;36!CL:0002076;8.32e-10;42!CL:0000071;3.37e-09;18!CL:0002078;6.60e-09;45!CL:1000449;8.68e-08;15!CL:0000213;2.79e-07;58!CL:0000215;2.79e-07;58!CL:1000497;4.54e-07;17!CL:0002518;4.54e-07;17!CL:0000076;5.26e-07;63!CL:0002251;6.93e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.24e-44,253;CL:0000223,6.57e-17,58;CL:0000115,1.95e-13,36;CL:0002078,2.10e-13,45;CL:0002139,3.00e-13,24;CL:0002076,1.15e-12,42;CL:0000076,9.90e-12,63;CL:0000213,2.26e-11,58;CL:0000215,2.26e-11,58;CL:0000071,2.33e-09,18;CL:0002546,2.33e-09,18;CL:1000449,9.40e-08,15;CL:1000497,4.94e-07,17;CL:0002518,4.94e-07,17;CL:0002251,5.06e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;3.42e-10;58!CL:0002546;3.37e-09;18!UBERON:0008947;6.14e-08;29 | |||
|ontology_enrichment_disease=DOID:305!7.23e-18!106;DOID:0050687!1.90e-15!143 | |ontology_enrichment_disease=DOID:305!7.23e-18!106;DOID:0050687!1.90e-15!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.02e-16,106;DOID:0050687,7.06e-12,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.47e-22!169;UBERON:0000925!8.47e-22!169;UBERON:0006595!8.47e-22!169;UBERON:0000477!2.02e-19!286;UBERON:0004111!1.92e-18!241;UBERON:0001007!9.94e-18!155;UBERON:0001555!9.94e-18!155;UBERON:0007026!9.94e-18!155;UBERON:0004921!1.23e-17!129;UBERON:0004185!1.23e-17!129;UBERON:0000077!3.42e-16!130;UBERON:0000064!8.78e-16!219;UBERON:0001041!1.89e-14!98;UBERON:0007023!3.30e-13!115;UBERON:0005177!5.53e-13!107;UBERON:0000481!3.10e-12!347;UBERON:0000025!3.25e-12!194;UBERON:0000062!3.61e-12!511;UBERON:0005911!9.69e-12!82;UBERON:0000483!1.67e-11!309;UBERON:0001004!1.98e-11!72;UBERON:0000119!5.56e-11!312;UBERON:0000468!7.21e-11!659;UBERON:0000922!5.21e-10!612;UBERON:0000466!7.32e-10!126;UBERON:0000065!1.89e-09!53;UBERON:0000467!1.99e-09!625;UBERON:0000480!2.24e-09!626;UBERON:0009569!2.56e-09!113;UBERON:0002050!2.71e-09!605;UBERON:0005423!2.71e-09!605;UBERON:0008947!3.44e-09!38;UBERON:0003258!3.44e-09!38;UBERON:0000923!4.23e-09!604;UBERON:0005291!4.23e-09!604;UBERON:0006598!4.23e-09!604;UBERON:0002532!4.23e-09!604;UBERON:0005172!4.37e-09!55;UBERON:0005173!4.37e-09!55;UBERON:0002365!9.24e-09!31;UBERON:0002330!9.24e-09!31;UBERON:0001986!2.81e-08!18;UBERON:0004638!2.81e-08!18;UBERON:0004852!2.81e-08!18;UBERON:0002530!4.01e-08!59;UBERON:0001048!1.58e-07!168;UBERON:0000487!2.18e-07!22;UBERON:0003929!3.64e-07!54;UBERON:0000058!4.36e-07!26;UBERON:0000072!6.11e-07!46;UBERON:0002417!7.25e-07!61;UBERON:0000916!7.25e-07!61;UBERON:0000080!9.48e-07!18;UBERON:0002120!9.48e-07!18;UBERON:0004875!9.48e-07!18;UBERON:0005721!9.48e-07!18;UBERON:0005754!9.48e-07!18;UBERON:0007297!9.48e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.37e-09;18!UBERON:0001986;3.37e-09;18!UBERON:0004852;3.37e-09;18!UBERON:0002365;1.10e-08;31!UBERON:0002330;1.10e-08;31!UBERON:0000065;4.61e-08;44!UBERON:0000487;5.58e-08;22!UBERON:0006555;8.68e-08;15!UBERON:0004819;8.68e-08;15!UBERON:0001285;8.68e-08;15!UBERON:0007684;8.68e-08;15!UBERON:0000353;1.06e-07;15!UBERON:0000490;3.05e-07;33!UBERON:0001737;3.86e-07;9!UBERON:0001557;3.86e-07;9!UBERON:0006914;5.61e-07;25 | |||
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| ||
|short_description=p2@EFNA1 | |short_description=p2@EFNA1 | ||
}} | }} |
Latest revision as of 11:20, 17 September 2015
Short description: | p2@EFNA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EFNA1_5end |
Coexpression cluster: | C3876_colon_liver_Hepatocyte_choriocarcinoma_chorionic_Renal_serous |
Association with transcript: | 2bp_to_ENST00000469878_5end |
EntrezGene: | EFNA1 |
HGNC: | 3221 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.24e-44 | 253 |
endodermal cell | 6.57e-17 | 58 |
endothelial cell | 1.95e-13 | 36 |
meso-epithelial cell | 2.10e-13 | 45 |
endothelial cell of vascular tree | 3.00e-13 | 24 |
endo-epithelial cell | 1.15e-12 | 42 |
squamous epithelial cell | 9.90e-12 | 63 |
lining cell | 2.26e-11 | 58 |
barrier cell | 2.26e-11 | 58 |
blood vessel endothelial cell | 2.33e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.33e-09 | 18 |
epithelial cell of nephron | 9.40e-08 | 15 |
kidney cell | 4.94e-07 | 17 |
kidney epithelial cell | 4.94e-07 | 17 |
epithelial cell of alimentary canal | 5.06e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.02e-16 | 106 |
cell type cancer | 7.06e-12 | 143 |