FFCP PHASE1:Hg19::chr1:153599706..153599730,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6284 | |EntrezGene=6284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10490 | |HGNC=10490 | ||
|TSSclassifier=strong | |||
|UniProt=Q99584 | |UniProt=Q99584 | ||
|association_with_transcript=13bp_to_ENST00000392623,NM_001024212,uc001fcg.2,uc009woh.2_5end | |association_with_transcript=13bp_to_ENST00000392623,NM_001024212,uc001fcg.2,uc009woh.2_5end | ||
|cluster_id=chr1:153599706..153599730,- | |||
|description=CAGE_peak_6_at_S100A13_5end | |description=CAGE_peak_6_at_S100A13_5end | ||
|id=chr1:153599706..153599730,- | |id=chr1:153599706..153599730,- | ||
|ontology_enrichment_celltype=CL:0000055!7.36e-22!180;CL:0000220!3.69e-13!246;CL:0002321!7.09e-13!248;CL:0000183!4.07e-12!59;CL:0000680!2.16e-11!57;CL:0000056!2.16e-11!57;CL:0000355!2.16e-11!57;CL:0000359!2.07e-10!32;CL:0000187!3.60e-10!54;CL:0000057!1.56e-09!75;CL:0000192!2.00e-09!42;CL:0000514!2.00e-09!42;CL:0000066!5.33e-09!254;CL:1000497!1.20e-08!18;CL:0002518!1.20e-08!18;CL:0000393!3.60e-08!60;CL:0000211!3.60e-08!60;CL:0000222!8.29e-08!119;CL:1000449!1.04e-07!16;CL:0000499!1.71e-07!27;CL:1000507!8.92e-07!12;CL:1000494!8.92e-07!12 | |ontology_enrichment_celltype=CL:0000055!7.36e-22!180;CL:0000220!3.69e-13!246;CL:0002321!7.09e-13!248;CL:0000183!4.07e-12!59;CL:0000680!2.16e-11!57;CL:0000056!2.16e-11!57;CL:0000355!2.16e-11!57;CL:0000359!2.07e-10!32;CL:0000187!3.60e-10!54;CL:0000057!1.56e-09!75;CL:0000192!2.00e-09!42;CL:0000514!2.00e-09!42;CL:0000066!5.33e-09!254;CL:1000497!1.20e-08!18;CL:0002518!1.20e-08!18;CL:0000393!3.60e-08!60;CL:0000211!3.60e-08!60;CL:0000222!8.29e-08!119;CL:1000449!1.04e-07!16;CL:0000499!1.71e-07!27;CL:1000507!8.92e-07!12;CL:1000494!8.92e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.67e-12;32!CL:1000497;4.83e-10;17!CL:0002518;4.83e-10;17!CL:1000507;4.61e-09;10!CL:1000494;4.61e-09;10!CL:1000449;6.10e-09;15!CL:0002681;5.17e-07;12!CL:0002584;5.17e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.63e-12,32;CL:1000497,5.09e-10,17;CL:0002518,5.09e-10,17;CL:0000680,1.33e-09,58;CL:0000056,1.33e-09,58;CL:0000355,1.33e-09,58;CL:1000507,4.48e-09,10;CL:1000494,4.48e-09,10;CL:1000449,6.76e-09,15;CL:0002321,9.01e-09,250;CL:0000192,1.21e-08,43;CL:0000514,1.21e-08,43;CL:0000187,2.53e-08,55;CL:0000057,2.78e-08,76;CL:0002681,5.95e-07,12;CL:0002584,5.95e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!2.57e-07!29;DOID:120!5.06e-07!27 | |ontology_enrichment_disease=DOID:193!2.57e-07!29;DOID:120!5.06e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:193;1.31e-07;29!DOID:120;3.22e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:193,1.34e-07,29;DOID:120,3.05e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.88e-17!365;UBERON:0000914!7.75e-16!83;UBERON:0002329!7.75e-16!83;UBERON:0003077!7.75e-16!83;UBERON:0003059!7.75e-16!83;UBERON:0007282!7.75e-16!83;UBERON:0009618!7.75e-16!83;UBERON:0007285!7.75e-16!83;UBERON:0000486!1.49e-15!82;UBERON:0002100!3.48e-15!216;UBERON:0004290!7.42e-14!70;UBERON:0005256!9.43e-13!143;UBERON:0000481!2.65e-12!347;UBERON:0003104!4.51e-12!238;UBERON:0009142!4.51e-12!238;UBERON:0001134!2.45e-10!61;UBERON:0002036!2.45e-10!61;UBERON:0003082!2.45e-10!61;UBERON:0000468!5.10e-10!659;UBERON:0002385!6.41e-10!63;UBERON:0001015!6.41e-10!63;UBERON:0000383!6.41e-10!63;UBERON:0003886!5.24e-09!63;UBERON:0000467!9.11e-09!625;UBERON:0000480!1.45e-08!626;UBERON:0003133!3.96e-08!48;UBERON:0002553!4.81e-08!70;UBERON:0000464!5.25e-08!104;UBERON:0002113!7.24e-08!27;UBERON:0003918!7.24e-08!27;UBERON:0005095!7.24e-08!27;UBERON:0007687!7.24e-08!27;UBERON:0000119!7.66e-08!312;UBERON:0004211!1.04e-07!16;UBERON:0001285!1.04e-07!16;UBERON:0007684!1.04e-07!16;UBERON:0003220!1.04e-07!16;UBERON:0004208!1.04e-07!16;UBERON:0002097!1.21e-07!40;UBERON:0003134!1.33e-07!37;UBERON:0000474!1.33e-07!37;UBERON:0006555!1.55e-07!17;UBERON:0005103!1.55e-07!17;UBERON:0000083!1.55e-07!17;UBERON:0009201!1.55e-07!17;UBERON:0004819!1.55e-07!17;UBERON:0006553!1.55e-07!17;UBERON:0003074!1.55e-07!17;UBERON:0003060!1.55e-07!17;UBERON:0003100!1.83e-07!41;UBERON:0003103!2.35e-07!69;UBERON:0000064!2.43e-07!219;UBERON:0003102!2.69e-07!95;UBERON:0000080!2.70e-07!18;UBERON:0002120!2.70e-07!18;UBERON:0004875!2.70e-07!18;UBERON:0005721!2.70e-07!18;UBERON:0005754!2.70e-07!18;UBERON:0007297!2.70e-07!18;UBERON:0005156!2.72e-07!59;UBERON:0000990!2.72e-07!59;UBERON:0002199!2.76e-07!45;UBERON:0002416!2.76e-07!45;UBERON:0000483!3.63e-07!309;UBERON:0004876!5.94e-07!20;UBERON:0009773!8.92e-07!12;UBERON:0001231!8.92e-07!12;UBERON:0004810!8.92e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.27e-09;24!UBERON:0011143;2.27e-09;24!UBERON:0004211;4.61e-09;10!UBERON:0009773;4.61e-09;10!UBERON:0001231;4.61e-09;10!UBERON:0004810;4.61e-09;10!UBERON:0006555;6.10e-09;15!UBERON:0004819;6.10e-09;15!UBERON:0001285;6.10e-09;15!UBERON:0007684;6.10e-09;15!UBERON:0006554;2.95e-07;30!UBERON:0001008;2.95e-07;30!UBERON:0001225;5.17e-07;12!UBERON:0008987;5.17e-07;12!UBERON:0000489;6.33e-07;29 | |||
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| ||
|short_description=p6@S100A13 | |short_description=p6@S100A13 | ||
}} | }} |
Latest revision as of 06:42, 17 September 2015
Short description: | p6@S100A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_S100A13_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000392623, NM_001024212, uc001fcg.2, uc009woh.2_5end |
EntrezGene: | S100A13 |
HGNC: | 10490 |
UniProt: | Q99584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.63e-12 | 32 |
kidney cell | 5.09e-10 | 17 |
kidney epithelial cell | 5.09e-10 | 17 |
muscle precursor cell | 1.33e-09 | 58 |
myoblast | 1.33e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.33e-09 | 58 |
kidney tubule cell | 4.48e-09 | 10 |
nephron tubule epithelial cell | 4.48e-09 | 10 |
epithelial cell of nephron | 6.76e-09 | 15 |
embryonic cell | 9.01e-09 | 250 |
smooth muscle cell | 1.21e-08 | 43 |
smooth muscle myoblast | 1.21e-08 | 43 |
muscle cell | 2.53e-08 | 55 |
fibroblast | 2.78e-08 | 76 |
kidney cortical cell | 5.95e-07 | 12 |
renal cortical epithelial cell | 5.95e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 1.34e-07 | 29 |
female reproductive organ cancer | 3.05e-07 | 27 |