FFCP PHASE1:Hg19::chr3:3841142..3841153,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57633 | |EntrezGene=57633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20980 | |HGNC=20980 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXK5 | |UniProt=Q6UXK5 | ||
|association_with_transcript=21bp_to_ENST00000319331,NM_020873,uc003bpt.3_5end | |association_with_transcript=21bp_to_ENST00000319331,NM_020873,uc003bpt.3_5end | ||
|cluster_id=chr3:3841142..3841153,+ | |||
|coexpression_cluster_id=C163 | |||
|description=CAGE_peak_3_at_LRRN1_5end | |description=CAGE_peak_3_at_LRRN1_5end | ||
|id=chr3:3841142..3841153,+ | |id=chr3:3841142..3841153,+ | ||
|ontology_enrichment_celltype=CL:0002322!7.43e-07!5 | |ontology_enrichment_celltype=CL:0002322!7.43e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.54e-12;5!CL:0000064;4.53e-09;3!CL:0000067;4.53e-09;3!CL:0005012;4.53e-09;3!CL:0002304;4.53e-09;3!CL:0002586;4.35e-08;3!CL:0000147;1.05e-07;14!CL:0000540;4.59e-07;6!CL:0000404;4.59e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.60e-12,5;CL:0000047,7.81e-11,8;CL:0000064,4.88e-09,3;CL:0000067,4.88e-09,3;CL:0005012,4.88e-09,3;CL:0002304,4.88e-09,3;CL:0002586,6.99e-08,3;CL:0000147,1.36e-07,14;CL:0000540,6.36e-07,6;CL:0000031,6.36e-07,6;CL:0000404,6.36e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.66e-07;3!CL:0000031;4.59e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004733;9.24e-22;12!UBERON:0002028;9.24e-22;12!UBERON:0007625;1.10e-21;11!UBERON:0004732;6.97e-20;13!UBERON:0002680;5.83e-16;9!UBERON:0001895;5.83e-16;9!UBERON:0000073;1.27e-14;53!UBERON:0002616;1.27e-14;53!UBERON:0002298;3.67e-14;6!UBERON:0000019;7.68e-14;19!UBERON:0000047;7.68e-14;19!UBERON:0004088;7.68e-14;19!UBERON:0010230;7.68e-14;19!UBERON:0000970;5.15e-13;20!UBERON:0002104;2.88e-12;21!UBERON:0001456;2.88e-12;21!UBERON:0001017;3.80e-12;75!UBERON:0000488;1.93e-11;4!UBERON:0000020;5.69e-11;23!UBERON:0000955;1.63e-10;68!UBERON:0001032;2.10e-10;24!UBERON:0004456;2.10e-10;24!UBERON:0001016;2.39e-10;83!UBERON:0003528;1.34e-09;34!UBERON:0002020;1.34e-09;34!UBERON:0002037;1.56e-09;6!UBERON:0002780;1.71e-09;41!UBERON:0001890;1.71e-09;41!UBERON:0001869;2.67e-09;32!UBERON:0001778;4.53e-09;3!UBERON:0001775;4.53e-09;3!UBERON:0000125;6.85e-09;9!UBERON:0002308;6.85e-09;9!UBERON:0002791;2.14e-08;32!UBERON:0000988;2.43e-08;3!UBERON:0001801;3.29e-08;14!UBERON:0001781;4.35e-08;3!UBERON:0001782;4.35e-08;3!UBERON:0000966;6.29e-08;5!UBERON:0005388;6.29e-08;5!UBERON:0001802;6.29e-08;5!UBERON:0001893;1.20e-07;34!UBERON:0002203;1.43e-07;6!UBERON:0001768;1.43e-07;6!UBERON:0002200;1.43e-07;6!UBERON:0001896;1.66e-07;3!UBERON:0005290;1.66e-07;3!UBERON:0010371;2.35e-07;31!UBERON:0000922;9.33e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,4.69e-35,82;UBERON:0007284,4.69e-35,82;UBERON:0002346,6.53e-33,86;UBERON:0001017,1.93e-32,81;UBERON:0001016,6.50e-30,89;UBERON:0010371,1.41e-28,104;UBERON:0001049,1.80e-26,56;UBERON:0005068,1.80e-26,56;UBERON:0006241,1.80e-26,56;UBERON:0007135,1.80e-26,56;UBERON:0000073,3.60e-26,53;UBERON:0002616,3.60e-26,53;UBERON:0004121,1.47e-24,171;UBERON:0000924,1.47e-24,171;UBERON:0006601,1.47e-24,171;UBERON:0000955,2.14e-23,68;UBERON:0006238,2.14e-23,68;UBERON:0003056,2.26e-22,61;UBERON:0004733,5.56e-22,12;UBERON:0002028,5.56e-22,12;UBERON:0007277,5.56e-22,12;UBERON:0007625,1.98e-21,11;UBERON:0003076,1.91e-20,15;UBERON:0003057,1.91e-20,15;UBERON:0004732,4.37e-20,13;UBERON:0010314,7.83e-19,132;UBERON:0002680,5.95e-16,9;UBERON:0001895,5.95e-16,9;UBERON:0010092,5.95e-16,9;UBERON:0002298,3.10e-14,6;UBERON:0000019,6.53e-13,20;UBERON:0000047,6.53e-13,20;UBERON:0010312,6.53e-13,20;UBERON:0004088,6.53e-13,20;UBERON:0010230,6.53e-13,20;UBERON:0003072,6.53e-13,20;UBERON:0004128,6.53e-13,20;UBERON:0003071,6.53e-13,20;UBERON:0000970,3.60e-12,21;UBERON:0002104,3.60e-12,21;UBERON:0002780,1.60e-11,41;UBERON:0001890,1.60e-11,41;UBERON:0003080,1.60e-11,41;UBERON:0006240,1.60e-11,41;UBERON:0001456,1.70e-11,22;UBERON:0000488,2.05e-11,4;UBERON:0003528,4.59e-11,34;UBERON:0002020,4.59e-11,34;UBERON:0011216,5.49e-11,223;UBERON:0000020,2.54e-10,24;UBERON:0001032,2.54e-10,24;UBERON:0004456,2.54e-10,24;UBERON:0001869,3.20e-10,32;UBERON:0002037,1.14e-09,6;UBERON:0006215,1.14e-09,6;UBERON:0001893,1.89e-09,34;UBERON:0007023,3.85e-09,114;UBERON:0001778,4.88e-09,3;UBERON:0001775,4.88e-09,3;UBERON:0000125,5.59e-09,9;UBERON:0002308,5.59e-09,9;UBERON:0005085,7.75e-09,31;UBERON:0002791,1.08e-08,32;UBERON:0001801,3.56e-08,14;UBERON:0000988,3.76e-08,3;UBERON:0000483,5.01e-08,306;UBERON:0001782,6.99e-08,3;UBERON:0005424,6.99e-08,3;UBERON:0000119,7.84e-08,309;UBERON:0001896,9.27e-08,3;UBERON:0005290,9.27e-08,3;UBERON:0010096,9.27e-08,3;UBERON:0000922,9.64e-08,592;UBERON:0002203,1.49e-07,6;UBERON:0001768,1.49e-07,6;UBERON:0002200,1.49e-07,6 | |||
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| ||
|short_description=p3@LRRN1 | |short_description=p3@LRRN1 | ||
}} | }} |
Latest revision as of 03:19, 18 September 2015
Short description: | p3@LRRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRN1_5end |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | 21bp_to_ENST00000319331, NM_020873, uc003bpt.3_5end |
EntrezGene: | LRRN1 |
HGNC: | 20980 |
UniProt: | Q6UXK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.60e-12 | 5 |
neuronal stem cell | 7.81e-11 | 8 |
ciliated cell | 4.88e-09 | 3 |
ciliated epithelial cell | 4.88e-09 | 3 |
multi-ciliated epithelial cell | 4.88e-09 | 3 |
non-pigmented ciliary epithelial cell | 4.88e-09 | 3 |
retinal pigment epithelial cell | 6.99e-08 | 3 |
pigment cell | 1.36e-07 | 14 |
neuron | 6.36e-07 | 6 |
neuroblast | 6.36e-07 | 6 |
electrically signaling cell | 6.36e-07 | 6 |