FFCP PHASE1:Hg19::chr3:190040223..190040243,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9076 | |EntrezGene=9076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2032 | |HGNC=2032 | ||
|TSSclassifier=strong | |||
|UniProt=B4DLC3,A5JSJ9,O95832 | |UniProt=B4DLC3,A5JSJ9,O95832 | ||
|association_with_transcript=0bp_to_ENST00000545382,NM_021101_5end | |association_with_transcript=0bp_to_ENST00000545382,NM_021101_5end | ||
|cluster_id=chr3:190040223..190040243,- | |||
|coexpression_cluster_id=C2736 | |||
|description=CAGE_peak_1_at_CLDN1_5end | |description=CAGE_peak_1_at_CLDN1_5end | ||
|id=chr3:190040223..190040243,- | |id=chr3:190040223..190040243,- | ||
|ontology_enrichment_celltype=CL:0000066!4.90e-39!254;CL:0000223!6.66e-19!59;CL:0002076!3.97e-16!43;CL:0002321!2.16e-13!248;CL:0000220!2.17e-13!246;CL:1000497!7.45e-08!18;CL:0002518!7.45e-08!18;CL:0002251!2.28e-07!21;CL:1000449!2.85e-07!16 | |ontology_enrichment_celltype=CL:0000066!4.90e-39!254;CL:0000223!6.66e-19!59;CL:0002076!3.97e-16!43;CL:0002321!2.16e-13!248;CL:0000220!2.17e-13!246;CL:1000497!7.45e-08!18;CL:0002518!7.45e-08!18;CL:0002251!2.28e-07!21;CL:1000449!2.85e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.55e-14;42!CL:0002251;7.86e-09;20!CL:1000497;2.39e-08;17!CL:0002518;2.39e-08;17!CL:1000449;9.59e-08;15!CL:1000507;2.31e-07;10!CL:1000494;2.31e-07;10!CL:0002368;8.06e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.80e-39,253;CL:0000223,8.86e-21,58;CL:0002076,4.57e-18,42;CL:0002321,1.79e-13,250;CL:0002251,8.43e-09,20;CL:1000497,2.11e-08,17;CL:0002518,2.11e-08,17;CL:1000449,8.38e-08,15;CL:1000507,2.29e-07,10;CL:1000494,2.29e-07,10;CL:0002368,8.15e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;3.11e-11;58!UBERON:0006595;4.24e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.63e-15!106;DOID:0050687!3.27e-13!143;DOID:120!3.80e-08!27;DOID:193!6.65e-08!29;DOID:1749!9.81e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:120;2.15e-08;27!DOID:1749;4.61e-08;14!DOID:193;7.88e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.48e-15,106;DOID:0050687,6.76e-13,143;DOID:120,2.34e-08,27;DOID:1749,5.05e-08,14;DOID:193,8.50e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.59e-24!169;UBERON:0000925!1.59e-24!169;UBERON:0006595!1.59e-24!169;UBERON:0000481!1.64e-23!347;UBERON:0001007!7.70e-21!155;UBERON:0001555!7.70e-21!155;UBERON:0007026!7.70e-21!155;UBERON:0000466!2.78e-20!126;UBERON:0003104!6.48e-19!238;UBERON:0009142!6.48e-19!238;UBERON:0004921!1.18e-17!129;UBERON:0004185!1.18e-17!129;UBERON:0005177!1.12e-16!107;UBERON:0000077!1.51e-16!130;UBERON:0000464!6.96e-16!104;UBERON:0001048!1.60e-15!168;UBERON:0000922!1.60e-15!612;UBERON:0001041!6.28e-15!98;UBERON:0005911!1.14e-14!82;UBERON:0002050!1.88e-14!605;UBERON:0005423!1.88e-14!605;UBERON:0000923!3.41e-14!604;UBERON:0005291!3.41e-14!604;UBERON:0006598!3.41e-14!604;UBERON:0002532!3.41e-14!604;UBERON:0000468!8.17e-14!659;UBERON:0000062!5.30e-13!511;UBERON:0000477!2.34e-12!286;UBERON:0000475!2.70e-12!365;UBERON:0001004!2.88e-12!72;UBERON:0000467!5.07e-12!625;UBERON:0000480!9.29e-12!626;UBERON:0002553!1.10e-11!70;UBERON:0001008!1.88e-11!45;UBERON:0006554!3.80e-11!44;UBERON:0000483!1.76e-10!309;UBERON:0003064!2.70e-10!37;UBERON:0004111!3.23e-10!241;UBERON:0000119!3.25e-10!312;UBERON:0003886!5.44e-10!63;UBERON:0005172!6.37e-10!55;UBERON:0005173!6.37e-10!55;UBERON:0000064!7.87e-10!219;UBERON:0000058!1.25e-09!26;UBERON:0002100!1.30e-09!216;UBERON:0003929!5.75e-09!54;UBERON:0005156!5.78e-09!59;UBERON:0000990!5.78e-09!59;UBERON:0000161!1.36e-08!35;UBERON:0000065!1.42e-08!53;UBERON:0002530!1.86e-08!59;UBERON:0009569!2.00e-08!113;UBERON:0004876!2.72e-08!20;UBERON:0000080!5.62e-08!18;UBERON:0002120!5.62e-08!18;UBERON:0004875!5.62e-08!18;UBERON:0005721!5.62e-08!18;UBERON:0005754!5.62e-08!18;UBERON:0007297!5.62e-08!18;UBERON:0006555!1.25e-07!17;UBERON:0005103!1.25e-07!17;UBERON:0000083!1.25e-07!17;UBERON:0009201!1.25e-07!17;UBERON:0004819!1.25e-07!17;UBERON:0006553!1.25e-07!17;UBERON:0003074!1.25e-07!17;UBERON:0003060!1.25e-07!17;UBERON:0002417!1.27e-07!61;UBERON:0000916!1.27e-07!61;UBERON:0005256!2.64e-07!143;UBERON:0004211!2.85e-07!16;UBERON:0001285!2.85e-07!16;UBERON:0007684!2.85e-07!16;UBERON:0003220!2.85e-07!16;UBERON:0004208!2.85e-07!16;UBERON:0003133!2.90e-07!48;UBERON:0000489!3.90e-07!32;UBERON:0008947!4.81e-07!38;UBERON:0003258!4.81e-07!38;UBERON:0001444!5.00e-07!48;UBERON:0002113!6.50e-07!27;UBERON:0003918!6.50e-07!27;UBERON:0005095!6.50e-07!27;UBERON:0007687!6.50e-07!27;UBERON:0003887!7.95e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.75e-09;30!UBERON:0001008;3.75e-09;30!UBERON:0006555;9.59e-08;15!UBERON:0004819;9.59e-08;15!UBERON:0001285;9.59e-08;15!UBERON:0007684;9.59e-08;15!UBERON:0004211;2.31e-07;10!UBERON:0009773;2.31e-07;10!UBERON:0001231;2.31e-07;10!UBERON:0004810;2.31e-07;10 | |||
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| ||
|short_description=p1@CLDN1 | |short_description=p1@CLDN1 | ||
}} | }} |
Latest revision as of 09:49, 17 September 2015
Short description: | p1@CLDN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLDN1_5end |
Coexpression cluster: | C2736_oral_immature_endometrial_serous_Keratinocyte_Mallassezderived_Gingival |
Association with transcript: | 0bp_to_ENST00000545382, NM_021101_5end |
EntrezGene: | CLDN1 |
HGNC: | 2032 |
UniProt: | B4DLC3A5JSJ9O95832 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.80e-39 | 253 |
endodermal cell | 8.86e-21 | 58 |
endo-epithelial cell | 4.57e-18 | 42 |
embryonic cell | 1.79e-13 | 250 |
epithelial cell of alimentary canal | 8.43e-09 | 20 |
kidney cell | 2.11e-08 | 17 |
kidney epithelial cell | 2.11e-08 | 17 |
epithelial cell of nephron | 8.38e-08 | 15 |
kidney tubule cell | 2.29e-07 | 10 |
nephron tubule epithelial cell | 2.29e-07 | 10 |
respiratory epithelial cell | 8.15e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.48e-15 | 106 |
cell type cancer | 6.76e-13 | 143 |
female reproductive organ cancer | 2.34e-08 | 27 |
squamous cell carcinoma | 5.05e-08 | 14 |
reproductive organ cancer | 8.50e-08 | 29 |