FFCP PHASE1:Hg19::chr19:14183568..14183627,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=113230 | |EntrezGene=113230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-60bp_to_uc002mxy.2_5end | |association_with_transcript=-60bp_to_uc002mxy.2_5end | ||
|cluster_id=chr19:14183568..14183627,+ | |||
|description=CAGE_peak_1_at_LOC113230_5end | |description=CAGE_peak_1_at_LOC113230_5end | ||
|id=chr19:14183568..14183627,+ | |id=chr19:14183568..14183627,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.23e-09;13!UBERON:0004161;2.95e-09;11!UBERON:0006595;7.92e-08;86!UBERON:0001041;3.20e-07;30!UBERON:0003104;6.24e-07;31 | |||
|ontology_enrichment_disease=DOID:305!8.02e-14!106;DOID:0050687!1.38e-09!143;DOID:162!5.47e-08!235;DOID:7!1.21e-07!39;DOID:14566!2.78e-07!239 | |ontology_enrichment_disease=DOID:305!8.02e-14!106;DOID:0050687!1.38e-09!143;DOID:162!5.47e-08!235;DOID:7!1.21e-07!39;DOID:14566!2.78e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:5093;5.07e-09;4!DOID:1612;5.07e-09;4!DOID:3119;2.52e-07;14!DOID:7;6.80e-07;39!DOID:299;7.66e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.37e-09,4;DOID:1612,5.37e-09,4;DOID:7,3.66e-08,39;DOID:305,2.07e-07,106;DOID:3119,2.96e-07,14;DOID:299,7.35e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.90e-17!115;UBERON:0004921!4.81e-13!129;UBERON:0004185!4.81e-13!129;UBERON:0001007!3.49e-12!155;UBERON:0001555!3.49e-12!155;UBERON:0007026!3.49e-12!155;UBERON:0004119!2.39e-11!169;UBERON:0000925!2.39e-11!169;UBERON:0006595!2.39e-11!169;UBERON:0000077!4.91e-10!130;UBERON:0005172!1.16e-09!55;UBERON:0005173!1.16e-09!55;UBERON:0001041!2.47e-09!98;UBERON:0005177!3.56e-09!107;UBERON:0002417!1.50e-07!61;UBERON:0000916!1.50e-07!61;UBERON:0009569!1.74e-07!113;UBERON:0005911!1.88e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;9.06e-12;33!UBERON:0005409;5.39e-11;22!UBERON:0002423;5.91e-09;25!UBERON:0001041;2.05e-07;14!UBERON:0000160;5.31e-07;17!UBERON:0002365;5.81e-07;31!UBERON:0002330;5.81e-07;31!UBERON:0006947;8.12e-07;3!UBERON:0004054;8.12e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,8.88e-11,118;UBERON:0005172,5.85e-10,54;UBERON:0005173,5.85e-10,54;UBERON:0001007,1.41e-09,145;UBERON:0001555,1.41e-09,145;UBERON:0007026,1.41e-09,145;UBERON:0005409,1.81e-09,25;UBERON:0009569,2.60e-09,112;UBERON:0007023,2.85e-09,114;UBERON:0004119,5.30e-09,160;UBERON:0000925,5.30e-09,160;UBERON:0006595,5.30e-09,160;UBERON:0009497,6.58e-09,25;UBERON:0000015,6.58e-09,25;UBERON:0002423,6.58e-09,25;UBERON:0006235,6.58e-09,25;UBERON:0004161,6.58e-09,25;UBERON:0005177,1.41e-08,101;UBERON:0002417,2.11e-08,60;UBERON:0000916,2.11e-08,60;UBERON:0009854,2.51e-08,23;UBERON:0008835,2.20e-07,22;UBERON:0003894,2.20e-07,22;UBERON:0000160,4.05e-07,17;UBERON:0002365,4.31e-07,31;UBERON:0002330,4.31e-07,31;UBERON:0001041,4.52e-07,87;UBERON:0009856,4.70e-07,26;UBERON:0002530,5.54e-07,59;UBERON:0006947,8.17e-07,3;UBERON:0004054,8.17e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,1.06978768047132,0.656804715599566,0.472264687882075,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.334372990781356,0,0.473447805734733,0,1.11410456885174,0,0,0,0.25618263945135,1.1705341280389,0.328875809207352,0.829050053357545,1.44901542867526,0.14828656316206,0,0,1.47302145506836,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,2.42311289670768,0,0,4.86821090482025,3.13433527138681,3.32394901297163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0.265059536642971,0.464775771478074,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.482022059766964,0.220587945464788,0.217879444092406,0,0.134831308160164,0.392442930250692,0,0,0,0,0,3.80265104465493,2.94848165003288,0,0,3.07471096357784,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,17.3844967551041,12.8772924314231,0.246217006087397,1.17002132569619,1.93220510975347,0,0,0,0,0,0,0,0.616339038092582,1.24396869324463,0.864719720501769,0.88369703398466,0,0.381988425558278,0,1.71072446022705,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0.200506470303285,0.184161977871793,0,0,0,1.35359883872224,1.38627606787947,0.784349769176855,2.92278449306521,0.527758144464379,0,0,0,0,0,0.501689773854853,1.27438136522519,0.831076008928724,0,1.09629938322967,2.0914836081992,0.769350375349168,0.328014645699706,0,8.96456801335184,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37879826913334,0,0,0,0,0,0,1.70894156152249,0,0.411362273086194,0,0,0,0.961416640147258,0,0.735120647943095,0.185803175125719,0,0.924843963529383,0.159426272728822,0.199579371432817,0.191505370132367,0,0,0,0,0.156679895773023,0,1.86220955581764,0,0,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0,4.45449878232388,0,1.08182271390393,0.33307196799782,0,6.17563783347125,0,1.94176834799221,3.67763168115679,0,0,0,0,0,0.281338832821026,0.111308705022906,1.48323486804084,0,0.597743964753209,1.65770349318689,0.755798243562828,0.102268682502155,0,0,0.359473404589307,2.14825409610731,0,0.986434056369336,0,0,0,0.278304294485554,0,8.33368835472746,5.42251999976413,2.89999830173917,0,0,0.945550727071745,1.03423011972439,0,1.56262495439963,0,0.241192877250816,0,1.21637185924347,0,0,0,0,1.00035336054936,0,4.15015027898508,1.79515288819544,0.869178975376065,0.31900115973192,0,0,0,0,0.498635045700469,0.225595660617181,0.392125068635479,0.167821586975843,0.189753732724185,0.317873157960757,0,0.652931232636591,0.424059214301822,0,14.9289289661776,11.1456531274207,6.11030144933625,1.77912677208373,2.34771483998355,2.61054873763638,0.337005664903385,0,0,0,0,0.242780379534093,12.2321164883311,8.46935012340647,0,0,0.300646838828985,0.414752765588989,0,0.330991955875499,0,0,0,0,0.347119476670262,0.195984794828755,0.174118413160805,2.62090002363045,0.51595809741485,0,0,0,1.06687918137261,0.0882561266915003,0.225980740780532,0,0,0.253243183823515,0.391102765469606,1.28254112402454,4.0556069000477,0,2.16135625731159,1.60351234632282,4.28987494654911,0.432164393964449,0.124252535565433,0,0.135904206073614,0.209205692624666,0,0,0.600420288709789,0.273810757783986,0,0,1.31443677139657,0.837847203816763,1.60412296808179,0,3.19486400798386,5.15071257763885,2.67805748930247,0.873385142327441,0,2.32991899054908,2.83619456306005,3.04938676010316,2.35912403489647,1.37798474120648,1.27009998098677,0,0.408610218334727,0.160753148465019,0.550157746388935,0,0.2249738915515,0.77380195455795,0.182248669974074,0,20.5682896050907,6.87155104568475,0,0.179287339332845,0.191915197319445,0,4.63464379255802,0.5085370753095,0,0,0,1.19730191562487,0,0,0,3.07759690723973,1.32506888912221,0,0.39669780522807,0.171086837884329,3.52407511158336,6.0868825163586,1.88645166119599,0.828478110694391,0,0.197611631897944,0.121792598380896,0,0,0,0,0.327872630709804,3.61224421375539,0,0,0,0.573409195690071,0.998361463831671,0.248385611765534,0.138348634936231,0,0,0,0,2.81000943484129,0.579684114443301,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0.521988583930423,0,0,0,0,0.308801447160972,0,0.176689145945881,0.192914038270915,0.168942440653073,0.76872455576384,0,0,0.276516872303462,0.389720617678777,0.531459361253452,0.49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| ||
|short_description=p1@LOC113230 | |short_description=p1@LOC113230 | ||
}} | }} |
Latest revision as of 03:32, 16 September 2015
Short description: | p1@LOC113230 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC113230_5end |
Coexpression cluster: | NA |
Association with transcript: | -60bp_to_uc002mxy.2_5end |
EntrezGene: | LOC113230 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 8.88e-11 | 118 |
abdomen element | 5.85e-10 | 54 |
abdominal segment element | 5.85e-10 | 54 |
digestive system | 1.41e-09 | 145 |
digestive tract | 1.41e-09 | 145 |
primitive gut | 1.41e-09 | 145 |
gastrointestinal system | 1.81e-09 | 25 |
subdivision of trunk | 2.60e-09 | 112 |
adult organism | 2.85e-09 | 114 |
endoderm-derived structure | 5.30e-09 | 160 |
endoderm | 5.30e-09 | 160 |
presumptive endoderm | 5.30e-09 | 160 |
epithelium of foregut-midgut junction | 6.58e-09 | 25 |
anatomical boundary | 6.58e-09 | 25 |
hepatobiliary system | 6.58e-09 | 25 |
foregut-midgut junction | 6.58e-09 | 25 |
septum transversum | 6.58e-09 | 25 |
trunk region element | 1.41e-08 | 101 |
abdominal segment of trunk | 2.11e-08 | 60 |
abdomen | 2.11e-08 | 60 |
digestive tract diverticulum | 2.51e-08 | 23 |
hepatic diverticulum | 2.20e-07 | 22 |
liver primordium | 2.20e-07 | 22 |
intestine | 4.05e-07 | 17 |
exocrine gland | 4.31e-07 | 31 |
exocrine system | 4.31e-07 | 31 |
foregut | 4.52e-07 | 87 |
sac | 4.70e-07 | 26 |
gland | 5.54e-07 | 59 |
male genital duct | 8.17e-07 | 3 |
internal male genitalia | 8.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.37e-09 | 4 |
breast cancer | 5.37e-09 | 4 |
disease of anatomical entity | 3.66e-08 | 39 |
carcinoma | 2.07e-07 | 106 |
gastrointestinal system cancer | 2.96e-07 | 14 |
adenocarcinoma | 7.35e-07 | 25 |