FFCP PHASE1:Hg19::chr2:227771044..227771054,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84236 | |EntrezGene=84236 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23081 | |HGNC=23081 | ||
|TSSclassifier=strong | |||
|UniProt=B9A054 | |UniProt=B9A054 | ||
|association_with_transcript=-373bp_to_ENST00000409053_5end | |association_with_transcript=-373bp_to_ENST00000409053_5end | ||
|cluster_id=chr2:227771044..227771054,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_9_at_RHBDD1_5end | |description=CAGE_peak_9_at_RHBDD1_5end | ||
|id=chr2:227771044..227771054,+ | |id=chr2:227771044..227771054,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.36e-18!24;CL:0000826!2.36e-18!24;CL:0000542!3.04e-14!53;CL:0000051!3.04e-14!53;CL:0000838!3.57e-11!52;CL:0000236!9.56e-09!14 | |ontology_enrichment_celltype=CL:0000945!2.36e-18!24;CL:0000826!2.36e-18!24;CL:0000542!3.04e-14!53;CL:0000051!3.04e-14!53;CL:0000838!3.57e-11!52;CL:0000236!9.56e-09!14 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:12603!7.55e-14!1;DOID:630!8.58e-14!1;DOID:0050177!8.58e-14!1;DOID:0050427!8.58e-14!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.84e-17!7;UBERON:0002370!8.06e-14!4;UBERON:0005058!8.06e-14!4;UBERON:0009113!8.06e-14!4;UBERON:0003295!8.06e-14!4;UBERON:0005562!8.06e-14!4;UBERON:0003351!1.61e-09!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.29e-195;2!UBERON:0005058;3.29e-195;2!UBERON:0009113;3.29e-195;2!UBERON:0004177;3.49e-79;5!UBERON:0005057;3.49e-79;5!UBERON:0000077;6.71e-16;27!UBERON:0002405;6.71e-16;27!UBERON:0002368;1.64e-10;33!UBERON:0002390;1.64e-10;32!UBERON:0000949;1.53e-08;43!UBERON:0002530;3.42e-07;57!UBERON:0002193;3.42e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.55e-98,4;UBERON:0005058,1.55e-98,4;UBERON:0009113,1.55e-98,4;UBERON:0003295,1.55e-98,4;UBERON:0005562,1.55e-98,4;UBERON:0003351,2.83e-66,6;UBERON:0004177,4.76e-57,7;UBERON:0005057,4.76e-57,7;UBERON:0000974,2.00e-40,10;UBERON:0003408,2.00e-40,10;UBERON:0001042,2.00e-40,10;UBERON:0009145,2.00e-40,10;UBERON:0006562,6.80e-37,11;UBERON:0009722,6.80e-37,11;UBERON:0007690,6.80e-37,11;UBERON:0008814,3.88e-23,18;UBERON:0001557,5.37e-22,19;UBERON:0004807,2.22e-15,28;UBERON:0000077,6.74e-15,29;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0000072,1.08e-09,47;UBERON:0003929,1.34e-08,54;UBERON:0000065,1.34e-08,54;UBERON:0002530,5.66e-08,59;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62 | |||
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|short_description=p9@RHBDD1 | |short_description=p9@RHBDD1 | ||
}} | }} |
Latest revision as of 03:24, 25 September 2015
Short description: | p9@RHBDD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RHBDD1_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -373bp_to_ENST00000409053_5end |
EntrezGene: | RHBDD1 |
HGNC: | 23081 |
UniProt: | B9A054 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.55e-98 | 4 |
hemolymphoid system gland | 1.55e-98 | 4 |
thymic region | 1.55e-98 | 4 |
pharyngeal gland | 1.55e-98 | 4 |
thymus primordium | 1.55e-98 | 4 |
pharyngeal epithelium | 2.83e-66 | 6 |
hemopoietic organ | 4.76e-57 | 7 |
immune organ | 4.76e-57 | 7 |
neck | 2.00e-40 | 10 |
gland of gut | 2.00e-40 | 10 |
chordate pharynx | 2.00e-40 | 10 |
pharyngeal region of foregut | 2.00e-40 | 10 |
pharynx | 6.80e-37 | 11 |
entire pharyngeal arch endoderm | 6.80e-37 | 11 |
early pharyngeal endoderm | 6.80e-37 | 11 |
pharyngeal arch system | 3.88e-23 | 18 |
upper respiratory tract | 5.37e-22 | 19 |
respiratory system epithelium | 2.22e-15 | 28 |
mixed endoderm/mesoderm-derived structure | 6.74e-15 | 29 |
endocrine gland | 1.42e-12 | 35 |
endocrine system | 4.55e-10 | 45 |
segment of respiratory tract | 1.08e-09 | 47 |
gut epithelium | 1.34e-08 | 54 |
respiratory tract | 1.34e-08 | 54 |
gland | 5.66e-08 | 59 |
anterior region of body | 1.20e-07 | 62 |
craniocervical region | 1.20e-07 | 62 |