FFCP PHASE1:Hg19::chr2:216245779..216245803,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=248bp_to_ENST00000474036_5end | |association_with_transcript=248bp_to_ENST00000474036_5end | ||
|cluster_id=chr2:216245779..216245803,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_52_at_FN1_5end | |description=CAGE_peak_52_at_FN1_5end | ||
|id=chr2:216245779..216245803,- | |id=chr2:216245779..216245803,- | ||
|ontology_enrichment_celltype=CL:0000055!2.41e-33!180;CL:0000057!3.19e-23!75;CL:0002371!9.40e-18!591;CL:0000680!1.92e-15!57;CL:0000056!1.92e-15!57;CL:0000355!1.92e-15!57;CL:0000144!6.01e-15!625;CL:0000183!1.25e-14!59;CL:0000187!4.62e-14!54;CL:0000393!8.99e-12!60;CL:0000211!8.99e-12!60;CL:0000548!3.55e-11!679;CL:0000004!3.55e-11!679;CL:0000255!3.55e-11!679;CL:0000012!1.09e-10!682;CL:0000048!4.64e-10!430;CL:0000220!5.89e-10!246;CL:0002321!8.40e-10!248;CL:0000222!1.09e-09!119;CL:0002620!1.10e-09!23;CL:0000723!2.20e-09!436;CL:0000192!2.31e-09!42;CL:0000514!2.31e-09!42;CL:0000034!7.00e-09!444;CL:0002494!7.70e-09!16;CL:0000359!5.97e-08!32 | |ontology_enrichment_celltype=CL:0000055!2.41e-33!180;CL:0000057!3.19e-23!75;CL:0002371!9.40e-18!591;CL:0000680!1.92e-15!57;CL:0000056!1.92e-15!57;CL:0000355!1.92e-15!57;CL:0000144!6.01e-15!625;CL:0000183!1.25e-14!59;CL:0000187!4.62e-14!54;CL:0000393!8.99e-12!60;CL:0000211!8.99e-12!60;CL:0000548!3.55e-11!679;CL:0000004!3.55e-11!679;CL:0000255!3.55e-11!679;CL:0000012!1.09e-10!682;CL:0000048!4.64e-10!430;CL:0000220!5.89e-10!246;CL:0002321!8.40e-10!248;CL:0000222!1.09e-09!119;CL:0002620!1.10e-09!23;CL:0000723!2.20e-09!436;CL:0000192!2.31e-09!42;CL:0000514!2.31e-09!42;CL:0000034!7.00e-09!444;CL:0002494!7.70e-09!16;CL:0000359!5.97e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0000723;1.82e-10;61!CL:0002494;3.57e-10;16!CL:0000134;1.19e-09;55!CL:0000057;3.05e-09;73!CL:0000048;2.50e-08;58!CL:0002620;3.38e-08;23!CL:0000680;1.54e-07;7!CL:0000349;2.91e-07;19!CL:0000034;5.11e-07;69!CL:0002334;5.77e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.77e-23,76;CL:0000048,3.41e-13,427;CL:0000723,1.66e-12,433;CL:0000034,1.26e-11,441;CL:0002494,2.63e-10,16;CL:0000680,1.31e-09,58;CL:0000056,1.31e-09,58;CL:0000355,1.31e-09,58;CL:0000187,4.29e-08,55;CL:0002620,5.07e-08,23;CL:0002320,9.65e-08,361;CL:0000349,4.33e-07,19;CL:0002334,5.07e-07,12;CL:0000134,5.31e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.14e-17!83;UBERON:0002329!1.14e-17!83;UBERON:0003077!1.14e-17!83;UBERON:0003059!1.14e-17!83;UBERON:0007282!1.14e-17!83;UBERON:0009618!1.14e-17!83;UBERON:0007285!1.14e-17!83;UBERON:0004290!5.96e-16!70;UBERON:0005256!8.45e-16!143;UBERON:0000486!5.82e-15!82;UBERON:0002385!4.80e-14!63;UBERON:0001015!4.80e-14!63;UBERON:0000383!4.80e-14!63;UBERON:0001134!7.19e-14!61;UBERON:0002036!7.19e-14!61;UBERON:0003082!7.19e-14!61;UBERON:0004872!1.46e-12!84;UBERON:0000490!2.54e-11!138;UBERON:0002049!3.22e-11!79;UBERON:0007798!3.22e-11!79;UBERON:0002100!4.21e-11!216;UBERON:0001637!4.85e-11!42;UBERON:0003509!4.85e-11!42;UBERON:0004572!4.85e-11!42;UBERON:0003914!7.67e-11!118;UBERON:0004535!7.63e-10!110;UBERON:0001009!2.61e-09!113;UBERON:0004573!2.67e-09!33;UBERON:0004571!2.67e-09!33;UBERON:0000055!5.43e-09!69;UBERON:0002199!2.45e-08!45;UBERON:0002416!2.45e-08!45;UBERON:0001981!3.15e-08!60;UBERON:0007500!3.15e-08!60;UBERON:0004537!3.15e-08!60;UBERON:0006965!3.15e-08!60;UBERON:0003102!1.03e-07!95;UBERON:0004923!1.74e-07!57;UBERON:0002097!2.19e-07!40;UBERON:0000948!7.25e-07!24;UBERON:0005498!7.25e-07!24;UBERON:0004140!7.25e-07!24;UBERON:0009881!7.25e-07!24;UBERON:0004141!7.25e-07!24;UBERON:0003084!7.25e-07!24;UBERON:0007005!7.25e-07!24;UBERON:0004139!7.25e-07!24;UBERON:0004291!7.25e-07!24;UBERON:0005631!8.14e-07!14;UBERON:0000158!8.14e-07!14;UBERON:0000468!9.60e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;2.63e-07;22!UBERON:0002384;9.41e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,5.16e-10,73;UBERON:0004872,6.24e-10,83;UBERON:0002329,9.81e-10,71;UBERON:0003059,9.81e-10,71;UBERON:0007282,9.81e-10,71;UBERON:0004290,9.81e-10,71;UBERON:0009618,9.81e-10,71;UBERON:0003077,1.86e-09,72;UBERON:0007285,1.86e-09,72;UBERON:0007503,2.67e-09,78;UBERON:0002384,5.84e-09,371;UBERON:0000486,1.57e-08,83;UBERON:0000948,1.64e-08,24;UBERON:0005498,1.64e-08,24;UBERON:0004140,1.64e-08,24;UBERON:0009881,1.64e-08,24;UBERON:0004141,1.64e-08,24;UBERON:0003084,1.64e-08,24;UBERON:0007005,1.64e-08,24;UBERON:0004139,1.64e-08,24;UBERON:0004291,1.64e-08,24;UBERON:0001134,2.03e-08,62;UBERON:0002036,2.03e-08,62;UBERON:0003082,2.03e-08,62;UBERON:0002199,2.29e-08,46;UBERON:0002416,2.29e-08,46;UBERON:0002385,6.87e-08,64;UBERON:0001015,6.87e-08,64;UBERON:0000383,6.87e-08,64;UBERON:0005631,7.51e-08,14;UBERON:0000158,7.51e-08,14;UBERON:0000926,2.22e-07,315;UBERON:0004120,2.22e-07,315;UBERON:0006603,2.22e-07,315;UBERON:0004923,2.24e-07,66;UBERON:0005256,2.30e-07,122;UBERON:0007100,4.73e-07,27;UBERON:0001637,6.95e-07,42;UBERON:0003509,6.95e-07,42;UBERON:0004572,6.95e-07,42;UBERON:0002097,7.41e-07,41 | |||
|phase1_expression=0.908391896352783,3.21150785836475,1.69145284915165,4.00293193412522,0.446961094427288,1.74467704820074,2.53299878168311,1.26343974685366,0,0.245733936501509,0,1.09220686065086,2.90143676051299,0.74259811776028,0.994192127183747,0.672325146451775,1.80808358407193,1.46062018077475,2.43966399395253,0.369363174230364,0.612002073732759,0.940364164434263,0,0.410623275218653,0.753255837568817,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.0181972204677,2.68280343881454,1.40648818027883,0.722878304769133,0.50133791063589,0.579386075843295,7.15757352345989,5.83961844363163,0.283604451492204,0.886917589850256,0.527008714158756,0,0,0,0,0,0,0,0,0,0.596287222100115,2.58070378531837,1.38856200643038,1.13061588384802,0.838998872419812,0.825354125820202,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0.367663080345869,1.62028389576352,0.17859945656816,0.22452937262617,0.563057402416611,0,0,0,0,0,0.436094052142534,5.4666914686485,2.78587125662075,6.75286822147416,12.333974692199,4.61068896857864,4.48542080113846,3.20246987189115,4.9333509683432,2.48968828319813,1.88594940897563,1.9615428373615,6.96244167166684,9.21881479167998,0.468642863667593,3.43376084513353,1.71141546463335,2.24173020827702,0.939475989150119,0.809364721840658,0.140450806702248,1.22492502752936,0.61417158655884,1.44656093646072,0,1.48360157567134,1.82032272387605,1.43723628363248,0.673344455816265,0.750711119231785,0.831192346452549,1.31693286264251,3.67785354958824,1.35214253015937,1.13432183160021,6.45802688479903,1.92201649936711,4.02670612203168,3.00091096084402,1.54578793857658,5.92573242104947,1.30281799432113,3.88185564154912,0.779496041289589,5.3011092591264,1.01254888506529,0.80823028409406,4.61512470271599,1.30977727695932,1.01736355386293,0.57978255948989,1.63647672354501,0.286804595389004,0,0.132529768321485,0.232387885739037,0.518305275076852,0,0,1.56449532329816,3.21620469096443,0,2.78620756819187,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,2.94017422771084,0,1.96565443335525,0,0,0.245976877086227,0.857839051492628,0.329250856225877,0,0,0,0.325808305310325,0,1.44331342025273,0,3.87448690978212,0,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0.283550194484773,1.61205340865127,0.871901815541886,1.15014803749563,0,0,0,0,0,0,0,0,0,0.822619941626588,0.600686115687835,0,0.448524337381443,0.43596006883328,0.8800594298514,0.904902010304444,7.15312891703765,1.690605505112,0.797814349754612,1.04007436911366,2.82928111688356,2.83698264046557,2.1313774321288,0.57191197463259,1.62786481617433,0,1.30294473717494,0,0.791951872933429,0,0,0.099972991182057,0,0,2.10833939483032,3.59437283237374,1.14861935834114,8.5582143024431,2.17171960001369,3.08214483825575,1.79060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.858840442033979,1.50051156317903,1.62759014219841,4.78332981520856,8.92144943985809,2.99634588564476,5.15422225967938,0.902838299183157,0,2.0694614258501,2.65690239414175,3.87175253937577,1.56390506042549,1.76221041716467,2.40200396667599,0,0,0,0,4.99306318531491,2.11673205330776,4.21783273291921,2.91577749247319,4.77122160536225,1.40953064181271,3.58195074346692,2.57366273829772,1.48418066444991,1.3878872442239,2.48586415438378,0.574890092096664,1.55776328755086,0.697262270759755,0.362578348774867,3.60911646545913,0.0920809889358963,0.114814448164607,0.728364672026868,1.44236856455367,0.451199612907412,0.0770153371044148,0,0,0.527758144464379,0,0,2.80690690932781,1.54227252690289,0.812839312631559,0.501689773854853,0,0,1.11937377361089,0,0,0,0,0.976135183992909,0.103041011647722,0,0.165018999841176,0.574265537996172,1.95018073810956,3.21367859688319,1.64340221096607,0.770243085573222,0.460511024178389,0.827019434907183,3.97454906012612,3.33538396002726,2.30111894023472,1.24644849905432,1.81813406897076,4.03599141466723,2.29702882490251,5.2602046044886,0.929691098594572,11.333244485903,0,0.616067160352178,0.532306030317022,0,1.48259375283136,0.858749320451947,0.372158369359667,2.84741482246853,1.33441135746677,0.255897791311334,4.2793898803392,0.636406495851874,4.70969184119538,0.179872457583315,0.823611089208164,0.942499218765491,0.606547444719948,3.17020642346017,0.842516912477962,0,1.21856744815642,0,0.818999468447914,0.707027159768564,4.52032466480971,1.65409603063837,1.99031692572366,0.876901770507525,3.47265320560013,4.59126326432643,1.21746226177622,0,1.12678241012897,0.860468113224309,1.27723753317057,4.63672366925625,0.709522128141196,1.05553817648832,1.31717957183961,0,1.04980416073495,0.0962221127255121,0.670302275535787,1.08890984861323,0.564862804660675,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,6.68484557265532,0.593929361665277,3.99308912729002,0,0,6.56721359635145,0,0,0.199247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| ||
|short_description=p52@FN1 | |short_description=p52@FN1 | ||
}} | }} |
Latest revision as of 02:27, 20 September 2015
Short description: | p52@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_52_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 248bp_to_ENST00000474036_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.77e-23 | 76 |
multi fate stem cell | 3.41e-13 | 427 |
somatic stem cell | 1.66e-12 | 433 |
stem cell | 1.26e-11 | 441 |
cardiocyte | 2.63e-10 | 16 |
muscle precursor cell | 1.31e-09 | 58 |
myoblast | 1.31e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-09 | 58 |
muscle cell | 4.29e-08 | 55 |
skin fibroblast | 5.07e-08 | 23 |
connective tissue cell | 9.65e-08 | 361 |
extraembryonic cell | 4.33e-07 | 19 |
preadipocyte | 5.07e-07 | 12 |
mesenchymal cell | 5.31e-07 | 354 |