FFCP PHASE1:Hg19::chr18:40857493..40857505,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6860 | |EntrezGene=6860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11512 | |HGNC=11512 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010dnh.2_5end | |association_with_transcript=0bp_to_uc010dnh.2_5end | ||
|cluster_id=chr18:40857493..40857505,- | |||
|coexpression_cluster_id=C759 | |||
|description=CAGE_peak_4_at_SYT4_5end | |description=CAGE_peak_4_at_SYT4_5end | ||
|id=chr18:40857493..40857505,- | |id=chr18:40857493..40857505,- | ||
|ontology_enrichment_celltype=CL:0000047!2.69e-10!8;CL:0000540!1.45e-07!6;CL:0000031!1.45e-07!6;CL:0000404!1.45e-07!6 | |ontology_enrichment_celltype=CL:0000047!2.69e-10!8;CL:0000540!1.45e-07!6;CL:0000031!1.45e-07!6;CL:0000404!1.45e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000333;8.91e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.42e-21;82!UBERON:0006215;9.93e-09;3!UBERON:0006241;3.08e-07;3!UBERON:0003057;3.08e-07;3 | |||
|ontology_enrichment_disease=DOID:171!2.67e-10!10;DOID:169!1.20e-07!6 | |ontology_enrichment_disease=DOID:171!2.67e-10!10;DOID:169!1.20e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:169;4.79e-10;6!DOID:171;2.35e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.89e-10,6;DOID:171,2.37e-08,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;4.12e-51;22!UBERON:0002780;1.69e-50;41!UBERON:0001890;1.69e-50;41!UBERON:0001869;5.37e-50;32!UBERON:0003528;1.98e-48;34!UBERON:0002020;1.98e-48;34!UBERON:0001893;1.28e-47;34!UBERON:0001950;4.70e-47;20!UBERON:0002791;8.21e-47;32!UBERON:0000073;2.44e-46;53!UBERON:0002616;2.44e-46;53!UBERON:0000956;2.04e-44;25!UBERON:0000203;2.04e-44;25!UBERON:0001017;5.26e-35;75!UBERON:0000955;1.46e-34;68!UBERON:0001016;2.47e-30;83!UBERON:0001894;6.96e-17;7!UBERON:0001871;1.47e-16;6!UBERON:0004733;8.62e-15;12!UBERON:0002028;8.62e-15;12!UBERON:0000200;1.86e-14;6!UBERON:0004732;1.64e-13;13!UBERON:0002298;2.40e-13;6!UBERON:0007023;8.40e-13;114!UBERON:0002420;8.57e-13;9!UBERON:0007245;8.57e-13;9!UBERON:0010009;8.57e-13;9!UBERON:0010011;8.57e-13;9!UBERON:0000454;8.57e-13;9!UBERON:0011216;1.01e-12;132!UBERON:0001872;1.40e-12;5!UBERON:0000125;2.11e-12;9!UBERON:0002308;2.11e-12;9!UBERON:0002021;2.33e-12;5!UBERON:0000349;4.31e-12;5!UBERON:0003296;1.85e-11;4!UBERON:0010133;1.85e-11;4!UBERON:0000369;1.97e-10;4!UBERON:0002435;1.97e-10;4!UBERON:0000204;1.97e-10;4!UBERON:0002784;2.91e-10;4!UBERON:0002680;1.72e-09;9!UBERON:0001895;1.72e-09;9!UBERON:0009663;7.83e-09;7!UBERON:0001870;2.96e-08;3!UBERON:0005383;3.07e-08;3!UBERON:0005382;3.07e-08;3!UBERON:0000013;8.91e-08;5!UBERON:0002410;8.91e-08;5!UBERON:0000988;1.32e-07;3!UBERON:0001896;2.11e-07;3!UBERON:0005290;2.11e-07;3!UBERON:0002240;3.08e-07;3!UBERON:0005174;3.08e-07;3!UBERON:0001137;3.08e-07;3!UBERON:0010314;7.79e-07;132!UBERON:0001905;9.52e-07;2!UBERON:0002757;9.52e-07;2!UBERON:0010134;9.52e-07;2!UBERON:0005408;9.52e-07;2!UBERON:0001899;9.52e-07;2 | |||
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| ||
|short_description=p4@SYT4 | |short_description=p4@SYT4 | ||
}} | }} |
Latest revision as of 13:51, 19 September 2015
Short description: | p4@SYT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYT4_5end |
Coexpression cluster: | C759_nonsmall_gastrointestinal_occipital_pineal_cerebellum_small_argyrophil |
Association with transcript: | 0bp_to_uc010dnh.2_5end |
EntrezGene: | SYT4 |
HGNC: | 11512 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.89e-10 | 6 |
neuroectodermal tumor | 2.37e-08 | 10 |