FFCP PHASE1:Hg19::chr17:982198..982256,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29 | |EntrezGene=29 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |HGNC=81 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z683 | |UniProt=B7Z683 | ||
|association_with_transcript=0bp_to_ENST00000536794,uc010vqg.1_5end | |association_with_transcript=0bp_to_ENST00000536794,uc010vqg.1_5end | ||
|cluster_id=chr17:982198..982256,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_5_at_ABR_5end | |description=CAGE_peak_5_at_ABR_5end | ||
|id=chr17:982198..982256,- | |id=chr17:982198..982256,- | ||
|ontology_enrichment_celltype=CL:0000047!1.75e-13!8;CL:0002319!1.02e-10!25;CL:0000133!3.04e-10!59;CL:0000540!4.08e-10!6;CL:0000031!4.08e-10!6;CL:0000404!4.08e-10!6;CL:0000221!1.85e-07!71;CL:1000507!4.89e-07!12;CL:1000494!4.89e-07!12 | |ontology_enrichment_celltype=CL:0000047!1.75e-13!8;CL:0002319!1.02e-10!25;CL:0000133!3.04e-10!59;CL:0000540!4.08e-10!6;CL:0000031!4.08e-10!6;CL:0000404!4.08e-10!6;CL:0000221!1.85e-07!71;CL:1000507!4.89e-07!12;CL:1000494!4.89e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.65e-16;5!CL:0002605;7.63e-11;3!CL:0002319;1.53e-08;25!CL:0000047;4.30e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.52e-11,3;CL:0000047,8.49e-11,8;CL:0000133,1.32e-08,59;CL:0002319,1.60e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.42e-12;82!UBERON:0010122;1.96e-07;2 | |||
|ontology_enrichment_disease=DOID:169!8.86e-08!6;DOID:171!1.41e-07!10 | |ontology_enrichment_disease=DOID:169!8.86e-08!6;DOID:171!1.41e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:169;1.07e-13;6!DOID:171;4.61e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.21e-13,6;DOID:171,4.93e-08,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;8.00e-57;32!UBERON:0002791;4.79e-54;32!UBERON:0001893;1.67e-51;34!UBERON:0003528;1.80e-48;34!UBERON:0002020;1.80e-48;34!UBERON:0000956;2.56e-48;25!UBERON:0000203;2.56e-48;25!UBERON:0002780;1.29e-43;41!UBERON:0001890;1.29e-43;41!UBERON:0002619;1.39e-39;22!UBERON:0001950;4.09e-39;20!UBERON:0000073;1.09e-26;53!UBERON:0002616;1.09e-26;53!UBERON:0000955;3.43e-25;68!UBERON:0001017;1.64e-24;75!UBERON:0001016;8.06e-22;83!UBERON:0001871;2.88e-21;6!UBERON:0002420;1.10e-16;9!UBERON:0007245;1.10e-16;9!UBERON:0010009;1.10e-16;9!UBERON:0010011;1.10e-16;9!UBERON:0000454;1.10e-16;9!UBERON:0000013;1.65e-16;5!UBERON:0002410;1.65e-16;5!UBERON:0000369;2.49e-13;4!UBERON:0002435;2.49e-13;4!UBERON:0000204;2.49e-13;4!UBERON:0000200;2.67e-12;6!UBERON:0009663;1.91e-11;7!UBERON:0011216;2.08e-11;132!UBERON:0005383;2.01e-10;3!UBERON:0005382;2.01e-10;3!UBERON:0002021;2.87e-10;5!UBERON:0000349;3.49e-10;5!UBERON:0000010;5.29e-09;8!UBERON:0000125;8.07e-09;9!UBERON:0002308;8.07e-09;9!UBERON:0000922;1.03e-07;49!UBERON:0001873;1.96e-07;2!UBERON:0001876;2.69e-07;2!UBERON:0002771;6.98e-07;2!UBERON:0000007;6.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.73e-65,89;UBERON:0001869,4.84e-63,32;UBERON:0002780,1.21e-59,41;UBERON:0001890,1.21e-59,41;UBERON:0003080,1.21e-59,41;UBERON:0006240,1.21e-59,41;UBERON:0001893,5.18e-59,34;UBERON:0002791,2.41e-58,32;UBERON:0001017,3.94e-57,81;UBERON:0003528,1.34e-54,34;UBERON:0002020,1.34e-54,34;UBERON:0000956,2.67e-48,25;UBERON:0000203,2.67e-48,25;UBERON:0001049,5.32e-48,56;UBERON:0005068,5.32e-48,56;UBERON:0006241,5.32e-48,56;UBERON:0007135,5.32e-48,56;UBERON:0000073,1.04e-47,53;UBERON:0002616,1.04e-47,53;UBERON:0000955,6.36e-46,68;UBERON:0006238,6.36e-46,68;UBERON:0003056,2.02e-43,61;UBERON:0002619,1.46e-39,22;UBERON:0001950,4.71e-39,20;UBERON:0003075,1.10e-34,82;UBERON:0007284,1.10e-34,82;UBERON:0002346,1.12e-32,86;UBERON:0004121,2.75e-32,171;UBERON:0000924,2.75e-32,171;UBERON:0006601,2.75e-32,171;UBERON:0011216,1.20e-31,223;UBERON:0010371,1.50e-25,104;UBERON:0001871,3.22e-21,6;UBERON:0010314,4.58e-21,132;UBERON:0002420,9.90e-17,9;UBERON:0007245,9.90e-17,9;UBERON:0010009,9.90e-17,9;UBERON:0010011,9.90e-17,9;UBERON:0000454,9.90e-17,9;UBERON:0000013,1.91e-16,5;UBERON:0002410,1.91e-16,5;UBERON:0007023,1.17e-13,114;UBERON:0000369,2.53e-13,4;UBERON:0002435,2.53e-13,4;UBERON:0000204,2.53e-13,4;UBERON:0010082,2.53e-13,4;UBERON:0000025,6.76e-13,192;UBERON:0000200,4.72e-12,6;UBERON:0009663,2.02e-11,7;UBERON:0005383,2.12e-10,3;UBERON:0005382,2.12e-10,3;UBERON:0002021,2.44e-10,5;UBERON:0000349,2.63e-10,5;UBERON:0000010,5.71e-09,8;UBERON:0000125,8.42e-09,9;UBERON:0002308,8.42e-09,9;UBERON:0004111,1.36e-08,240;UBERON:0005423,2.38e-08,581;UBERON:0000922,6.10e-08,592;UBERON:0001873,1.96e-07,2;UBERON:0010122,1.96e-07,2;UBERON:0001876,2.16e-07,2;UBERON:0000923,2.92e-07,560;UBERON:0010316,2.92e-07,560;UBERON:0005291,2.92e-07,560;UBERON:0006598,2.92e-07,560;UBERON:0010317,2.92e-07,560;UBERON:0002532,2.92e-07,560;UBERON:0002050,4.08e-07,564;UBERON:0000007,7.31e-07,2;UBERON:0002771,9.61e-07,2 | |||
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| ||
|short_description=p5@ABR | |short_description=p5@ABR | ||
}} | }} |
Latest revision as of 17:22, 18 September 2015
Short description: | p5@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ABR_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000536794, uc010vqg.1_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | B7Z683 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.52e-11 | 3 |
neuronal stem cell | 8.49e-11 | 8 |
neurectodermal cell | 1.32e-08 | 59 |
neural cell | 1.60e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.21e-13 | 6 |
neuroectodermal tumor | 4.93e-08 | 10 |