FFCP PHASE1:Hg19::chr11:832944..832994,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:832944..832994,+
|short_description=p1@CD151
|description=CAGE_peak_1_at_CD151_5end
|association_with_transcript=0bp_to_ENST00000322008,ENST00000397421,EN...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=977 | |EntrezGene=977 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1630 | |HGNC=1630 | ||
|TSSclassifier=strong | |||
|UniProt=P48509,E9PI15,E9PK37,E9PLZ6,E9PL82,E9PRJ3,Q6ZNZ0 | |UniProt=P48509,E9PI15,E9PK37,E9PLZ6,E9PL82,E9PRJ3,Q6ZNZ0 | ||
|association_with_transcript=0bp_to_ENST00000322008,ENST00000397421,ENST00000524748,ENST00000525333,ENST00000525868,ENST00000526693,ENST00000527341,ENST00000528143,ENST00000529810,ENST00000530155,ENST00000531999,NM_001039490,NM_004357,NM_139029,NM_139030,uc001lrx.2,uc001lry.2,uc001lrz.2,uc001lsa.2,uc001lsb.2_5end | |||
|cluster_id=chr11:832944..832994,+ | |||
|coexpression_cluster_id=C887 | |||
|description=CAGE_peak_1_at_CD151_5end | |||
|id=chr11:832944..832994,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.76e-28!180;CL:0000222!3.31e-24!119;CL:0000220!2.92e-23!246;CL:0002321!1.49e-22!248;CL:0000548!7.00e-20!679;CL:0000004!7.00e-20!679;CL:0000255!7.00e-20!679;CL:0000144!8.71e-20!625;CL:0002371!1.35e-19!591;CL:0000012!6.61e-19!682;CL:0000183!1.74e-15!59;CL:0000057!3.27e-15!75;CL:0000680!2.54e-14!57;CL:0000056!2.54e-14!57;CL:0000355!2.54e-14!57;CL:0000192!1.76e-13!42;CL:0000514!1.76e-13!42;CL:0000187!3.97e-13!54;CL:0000359!2.41e-12!32;CL:0000393!6.84e-11!60;CL:0000211!6.84e-11!60;CL:0000066!6.87e-11!254;CL:0000213!4.00e-09!57;CL:0000215!4.00e-09!57;CL:0002078!1.66e-08!44;CL:1000449!2.66e-08!16;CL:1000497!5.14e-08!18;CL:0002518!5.14e-08!18;CL:0000003!9.92e-08!722;CL:0000115!4.12e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.28e-11;32!CL:0000192;1.01e-09;43!CL:1000449;1.49e-08;15!CL:1000497;3.26e-08;17!CL:0002518;3.26e-08;17!CL:0000134;6.80e-08;55!CL:0000187;2.15e-07;55!CL:0002681;6.91e-07;12!CL:0002584;6.91e-07;12!CL:0000349;8.32e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.52e-24,121;CL:0002321,6.24e-23,250;CL:0000057,1.83e-15,76;CL:0000680,3.02e-14,58;CL:0000056,3.02e-14,58;CL:0000355,3.02e-14,58;CL:0000192,2.31e-13,43;CL:0000514,2.31e-13,43;CL:0000187,4.67e-13,55;CL:0000359,2.41e-12,32;CL:0000393,7.40e-11,61;CL:0000211,7.40e-11,61;CL:0000066,7.49e-11,253;CL:0000213,1.95e-09,58;CL:0000215,1.95e-09,58;CL:0002078,7.92e-09,45;CL:1000449,1.49e-08,15;CL:1000497,3.26e-08,17;CL:0002518,3.26e-08,17;CL:0000115,1.97e-07,36;CL:0002681,6.81e-07,12;CL:0002584,6.81e-07,12;CL:0000349,8.27e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;1.01e-09;43!CL:0000355;1.28e-07;58!CL:0000222;2.03e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!4.74e-23!118;UBERON:0002049!5.34e-21!79;UBERON:0007798!5.34e-21!79;UBERON:0004872!7.71e-20!84;UBERON:0005256!2.97e-19!143;UBERON:0000055!9.40e-19!69;UBERON:0002100!5.53e-18!216;UBERON:0001981!8.72e-18!60;UBERON:0007500!8.72e-18!60;UBERON:0004537!8.72e-18!60;UBERON:0006965!8.72e-18!60;UBERON:0001009!3.79e-16!113;UBERON:0001637!9.00e-16!42;UBERON:0003509!9.00e-16!42;UBERON:0004572!9.00e-16!42;UBERON:0004535!1.53e-15!110;UBERON:0000914!3.95e-15!83;UBERON:0002329!3.95e-15!83;UBERON:0003077!3.95e-15!83;UBERON:0003059!3.95e-15!83;UBERON:0007282!3.95e-15!83;UBERON:0009618!3.95e-15!83;UBERON:0007285!3.95e-15!83;UBERON:0000486!6.57e-15!82;UBERON:0000490!2.39e-14!138;UBERON:0000468!4.71e-14!659;UBERON:0000926!5.83e-14!448;UBERON:0004120!5.83e-14!448;UBERON:0006603!5.83e-14!448;UBERON:0004290!4.42e-13!70;UBERON:0003104!6.70e-13!238;UBERON:0009142!6.70e-13!238;UBERON:0001134!1.09e-12!61;UBERON:0002036!1.09e-12!61;UBERON:0003082!1.09e-12!61;UBERON:0002385!1.72e-12!63;UBERON:0001015!1.72e-12!63;UBERON:0000383!1.72e-12!63;UBERON:0004573!1.85e-12!33;UBERON:0004571!1.85e-12!33;UBERON:0000467!7.26e-12!625;UBERON:0000480!1.07e-11!626;UBERON:0000475!1.55e-09!365;UBERON:0000119!4.71e-09!312;UBERON:0000483!8.62e-09!309;UBERON:0009569!2.07e-08!113;UBERON:0004211!2.66e-08!16;UBERON:0001285!2.66e-08!16;UBERON:0007684!2.66e-08!16;UBERON:0003220!2.66e-08!16;UBERON:0004208!2.66e-08!16;UBERON:0000481!5.74e-08!347;UBERON:0003103!5.86e-08!69;UBERON:0006555!5.97e-08!17;UBERON:0005103!5.97e-08!17;UBERON:0000083!5.97e-08!17;UBERON:0009201!5.97e-08!17;UBERON:0004819!5.97e-08!17;UBERON:0006553!5.97e-08!17;UBERON:0003074!5.97e-08!17;UBERON:0003060!5.97e-08!17;UBERON:0000353!7.42e-08!17;UBERON:0004876!1.02e-07!20;UBERON:0000080!1.44e-07!18;UBERON:0002120!1.44e-07!18;UBERON:0004875!1.44e-07!18;UBERON:0005721!1.44e-07!18;UBERON:0005754!1.44e-07!18;UBERON:0007297!1.44e-07!18;UBERON:0003102!1.84e-07!95;UBERON:0000947!2.22e-07!21;UBERON:0010191!2.22e-07!21;UBERON:0002050!6.54e-07!605;UBERON:0005423!6.54e-07!605;UBERON:0000923!6.96e-07!604;UBERON:0005291!6.96e-07!604;UBERON:0006598!6.96e-07!604;UBERON:0002532!6.96e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.20e-12;42!UBERON:0003509;8.20e-12;42!UBERON:0004572;8.20e-12;42!UBERON:0004573;2.26e-11;33!UBERON:0004571;2.26e-11;33!UBERON:0003914;6.64e-11;74!UBERON:0007500;5.13e-10;56!UBERON:0001981;5.13e-10;56!UBERON:0004537;5.13e-10;56!UBERON:0000055;3.45e-09;65!UBERON:0002049;7.00e-09;75!UBERON:0007798;7.00e-09;75!UBERON:0006555;1.49e-08;15!UBERON:0004819;1.49e-08;15!UBERON:0001285;1.49e-08;15!UBERON:0007684;1.49e-08;15!UBERON:0000353;7.57e-08;15!UBERON:0000947;2.28e-07;21!UBERON:0010191;2.28e-07;21!UBERON:0000025;5.27e-07;93!UBERON:0001225;6.91e-07;12!UBERON:0008987;6.91e-07;12 | |||
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| ||
|short_description=p1@CD151 | |||
}} | }} |
Latest revision as of 19:16, 24 September 2015
Short description: | p1@CD151 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD151_5end |
Coexpression cluster: | C887_Mesenchymal_Alveolar_Smooth_Renal_Fibroblast_leiomyoma_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000322008, ENST00000397421, ENST00000524748, ENST00000525333, ENST00000525868, ENST00000526693, ENST00000527341, ENST00000528143, ENST00000529810, ENST00000530155, ENST00000531999, NM_001039490, NM_004357, NM_139029, NM_139030, uc001lrx.2, uc001lry.2, uc001lrz.2, uc001lsa.2, uc001lsb.2_5end |
EntrezGene: | CD151 |
HGNC: | 1630 |
UniProt: | P48509E9PI15E9PK37E9PLZ6E9PL82E9PRJ3Q6ZNZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.52e-24 | 121 |
embryonic cell | 6.24e-23 | 250 |
fibroblast | 1.83e-15 | 76 |
muscle precursor cell | 3.02e-14 | 58 |
myoblast | 3.02e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.02e-14 | 58 |
smooth muscle cell | 2.31e-13 | 43 |
smooth muscle myoblast | 2.31e-13 | 43 |
muscle cell | 4.67e-13 | 55 |
vascular associated smooth muscle cell | 2.41e-12 | 32 |
electrically responsive cell | 7.40e-11 | 61 |
electrically active cell | 7.40e-11 | 61 |
epithelial cell | 7.49e-11 | 253 |
lining cell | 1.95e-09 | 58 |
barrier cell | 1.95e-09 | 58 |
meso-epithelial cell | 7.92e-09 | 45 |
epithelial cell of nephron | 1.49e-08 | 15 |
kidney cell | 3.26e-08 | 17 |
kidney epithelial cell | 3.26e-08 | 17 |
endothelial cell | 1.97e-07 | 36 |
kidney cortical cell | 6.81e-07 | 12 |
renal cortical epithelial cell | 6.81e-07 | 12 |
extraembryonic cell | 8.27e-07 | 19 |