FFCP PHASE1:Hg19::chr11:830434..830484,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:830434..830484,+
|short_description=p1@EFCAB4A
|description=CAGE_peak_1_at_EFCAB4A_5end
|association_with_transcript=0bp_to_ENST00000526531_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283229 | |EntrezGene=283229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28703 | |HGNC=28703 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000526531_5end | |||
|cluster_id=chr11:830434..830484,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_1_at_EFCAB4A_5end | |||
|id=chr11:830434..830484,+ | |||
|ontology_enrichment_celltype=CL:0002321!7.47e-16!248;CL:0000220!4.14e-15!246;CL:0000066!7.15e-12!254;CL:1000497!6.41e-11!18;CL:0002518!6.41e-11!18;CL:1000449!7.06e-10!16;CL:0000055!9.50e-09!180;CL:0000222!2.33e-08!119;CL:1000507!4.52e-08!12;CL:1000494!4.52e-08!12;CL:0002681!7.62e-08!13;CL:0002584!7.62e-08!13;CL:0000325!2.32e-07!39;CL:0002078!5.46e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:1000497;4.57e-13;17!CL:0002518;4.57e-13;17!CL:1000449;7.53e-12;15!CL:0002681;2.31e-09;12!CL:0002584;2.31e-09;12!CL:1000507;3.06e-09;10!CL:1000494;3.06e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.16e-15,253;CL:0002321,8.34e-15,250;CL:1000497,5.07e-13,17;CL:0002518,5.07e-13,17;CL:1000449,9.09e-12,15;CL:0002681,2.71e-09,12;CL:0002584,2.71e-09,12;CL:1000507,3.25e-09,10;CL:1000494,3.25e-09,10;CL:0002078,1.59e-08,45;CL:0000222,1.39e-07,121;CL:0000115,1.85e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006555;7.53e-12;15!UBERON:0004819;7.53e-12;15!UBERON:0001285;7.53e-12;15!UBERON:0007684;7.53e-12;15!UBERON:0000970;1.66e-10;20!UBERON:0000019;4.87e-10;19!UBERON:0000047;4.87e-10;19!UBERON:0004088;4.87e-10;19!UBERON:0010230;4.87e-10;19!UBERON:0000020;6.27e-10;23!UBERON:0001456;1.01e-09;21!UBERON:0002104;1.25e-09;21!UBERON:0001225;2.31e-09;12!UBERON:0008987;2.31e-09;12!UBERON:0002113;2.77e-09;24!UBERON:0011143;2.77e-09;24!UBERON:0004211;3.06e-09;10!UBERON:0009773;3.06e-09;10!UBERON:0001231;3.06e-09;10!UBERON:0004810;3.06e-09;10!UBERON:0001032;3.60e-09;24!UBERON:0004456;3.60e-09;24!UBERON:0006554;4.25e-09;30!UBERON:0001008;4.25e-09;30!UBERON:0000353;5.46e-09;15!UBERON:0007625;1.49e-08;11!UBERON:0006876;7.75e-08;11!UBERON:0000490;2.19e-07;33!UBERON:0000489;6.08e-07;29!UBERON:0001801;7.90e-07;14 | |||
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|phase1_expression=0.181678379270557,2.99740733447376,0.563817616383885,1.0007329835313,0.893922188854576,0,7.59899634504932,1.89515962028049,9.66386824339403,6.63481628554074,31.4010525587592,4.58726881473362,3.16520373874144,5.07442047136191,3.97676850873499,0.672325146451775,0,0.730310090387373,0,12.0658636915252,29.9881016129052,3.13454721478088,2.28988789704845,5.33810257784248,2.88748071068046,0,0,0,0,0,0,2.75826367343678,1.204823675113,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0.422510572623884,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,1.34140171940727,0.895037932904712,3.2529523714611,0,2.89693037921647,1.5905718941022,1.94653948121054,14.6528966604305,21.2860221564061,18.9723137097152,0.72038491523742,2.18577172975525,1.85392221392215,0,0,0,0,0.571994910780128,0,1.39133685156694,0,4.16568601929113,0.56530794192401,1.25849830862972,8.52865930014209,0.417989933073621,3.6178346283706,1.42306505074684,2.34304428935269,1.61131726843659,4.56163263431108,6.83373761134875,2.20597848207521,3.24056779152704,4.46498641420399,2.2452937262617,3.37834441449967,4.5994991239765,5.69559395740877,2.38162267109529,0,0,3.05265836499774,0,0.25326102332916,0.926864265692532,1.14734648299525,1.77334191099179,3.36406560085384,0,0.49333509683432,1.55605517699883,0.67355336034844,0.817309515567294,3.32986340818849,4.60940739583999,0.468642863667593,0,1.1409436430889,1.04614076386261,0.23486899728753,0.161872944368132,0.842704840213491,1.02077085627447,3.4393608847295,1.65321249881225,0,0,0,0.718618141816238,0.336672227908132,1.25118519871964,1.10825646193673,2.19488810440419,0.919463387397059,0.901428353439581,0.453728732640084,0.89694817844431,0.640672166455702,0.423863802319124,0.900273288253207,0.824420233907511,0.257640540045629,0.744467425326359,1.0126579934476,1.36411807225678,1.51460264546469,0.552299391853796,1.93975268182574,2.4850671476163,1.10827308050404,1.52604533079439,0.57978255948989,1.09098448236334,1.43402297694502,11.7094757884412,8.74696470921803,11.3870064012128,5.49403591581463,7.31730467539322,6.56959246336494,6.25798129319264,1.92972281457866,0,0,2.16563844500876,0,0,0,0,0,0,0,0.196221465125346,0,22.1446636387394,1.40241773803446,2.057870056657,1.47008711385542,0,0,0.590789906681404,0,4.18160691046586,42.0341135231388,1.64625428112938,1.1240175325762,0.603173834469785,3.33318402570707,0,3.11980435583874,12.9898207822746,17.3895607462615,2.93521735589554,1.01056513432752,0.925971025153221,2.85381228351897,0,0,0.246217006087397,0.234004265139238,0.148631162288728,2.81201501960331,0.16798212819886,0.567100388969546,0,0,0.766765358330422,0,0,0.207328115540772,0,0,0.190493682876507,0.763976851116555,0,1.71072446022705,1.43958489784653,9.61097785100536,0,13.3435990370979,6.5394010324992,30.4353886156943,0.904902010304444,7.15312891703765,0,0.797814349754612,0,9.51667284769926,8.5109479213967,10.9233093396601,0.714889968290738,1.08524321078289,4.11620168390384,0,1.06617584622764,0,1.50719688529793,3.48613383440118,1.89948683245908,0,0,0,1.4377491329495,3.44585807502342,1.42636905040718,0.723906533337896,3.49309748335652,2.86497541183833,0,0,0,0,3.30323011489202,2.60279707715243,0,0.837581326671744,0,0,0,0,3.43536176813592,7.00238729483548,2.71265023699736,1.03985430765404,0,0.157702415033935,0.937131319941706,2.70851489754947,4.5481500811197,1.03473071292505,1.99267679560631,5.34670588770939,0.521301686808497,97.3131752589821,20.9317488524622,0,0,0,0.909382714338778,4.99306318531491,0.907170879989041,0.744323423456331,1.07423381301644,1.68396056659844,0.640695746278505,1.02341449813341,0.160853921143607,2.96836132889982,0.462629081407967,0.355123450626254,1.72467027628999,1.03850885836724,1.39452454151951,7.6141453242722,1.60405176242628,0.460404944679482,0.459257792658427,0,0.786746489756545,11.2799903226853,14.7099293869432,53.3357843040262,23.3822759445217,22.4824969541825,4.54933536283586,4.25234263191289,2.37507507712353,13.880452742126,24.1142329414029,39.6334921345334,10.4499271948466,7.47968408035852,11.6414872455533,0,0,40.2626696432731,6.23227826829441,17.5704333118724,0.309123034943167,0,0,1.72279661398852,0.650060246036521,0,9.28038895604371,3.85121542786611,3.68408819342711,1.37836572484531,1.50388342815583,1.45016693914229,1.96021243057032,10.1496520637281,0,0.960950336825531,3.06270509987002,1.71968227454435,1.85938219718914,1.25924938732256,1.3940745403212,0.924100740528266,1.06461206063404,0.869932992075073,4.07713282028624,1.00187420719394,18.2357600986237,3.48017367190598,3.0500831027812,5.11795582622668,1.28381696410176,1.27281299170375,3.92474320099615,0.899362287916574,0,0.471249609382746,0.606547444719948,0,0.842516912477962,3.41343617362713,0.731140468893853,3.16950440270266,0.682499557039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| ||
|short_description=p1@EFCAB4A | |||
}} | }} |
Latest revision as of 19:03, 24 September 2015
Short description: | p1@EFCAB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EFCAB4A_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 0bp_to_ENST00000526531_5end |
EntrezGene: | EFCAB4A |
HGNC: | 28703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.16e-15 | 253 |
embryonic cell | 8.34e-15 | 250 |
kidney cell | 5.07e-13 | 17 |
kidney epithelial cell | 5.07e-13 | 17 |
epithelial cell of nephron | 9.09e-12 | 15 |
kidney cortical cell | 2.71e-09 | 12 |
renal cortical epithelial cell | 2.71e-09 | 12 |
kidney tubule cell | 3.25e-09 | 10 |
nephron tubule epithelial cell | 3.25e-09 | 10 |
meso-epithelial cell | 1.59e-08 | 45 |
mesodermal cell | 1.39e-07 | 121 |
endothelial cell | 1.85e-07 | 36 |